| Literature DB >> 23173046 |
I Wesley Gapp1, Curtis R Congreve, Bruce S Lieberman.
Abstract
The Cheiruridae are a diverse group of trilobites and several subfamilies within the clade have been the focus of recent phylogenetic studies. This paper focuses on the relationships of one of those subfamilies, the Ordovician Eccoptochilinae. We analyze sixteen species from six genera within the traditionally defined group, using the pilekiid Anacheirurus frederici as an outgroup. To assess the monophyly of the Eccoptochilinae seven sphaerexochine species, Kawina arnoldi, Sphaerexochus arenosus, S. atacius, S. latifrons, S. mirus, S. parvus, and S. scabridus were included in the analysis as well. The results of this analysis show that the genus Eccoptochile represents a paraphyletic grade and species traditionally assigned to Parasphaerexochus and Skelipyx plot within Pseudosphaerexochus. Also, representative species of Sphaerexochinae plot within the traditionally defined Eccoptochilinae, suggesting Eccoptochilinae itself is paraphyletic. To resolve this, we propose all species of Pseudosphaerexochus be placed within Sphaerexochinae and Eccoptochilinae be restricted to a monotypic Eccoptochile clavigera.Entities:
Mesh:
Year: 2012 PMID: 23173046 PMCID: PMC3500270 DOI: 10.1371/journal.pone.0049115
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Character state distributions for taxa used in phylogenetic analysis.
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | 33 | 34 | |
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| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | X | 0 | 0 | 0 | 0 | 0 | 0 |
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| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | X | 0 | 0 | ? | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 |
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| 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 |
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| 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | X | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 1 |
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| 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | X | 0 | 1 | 1 | 0 | 0 | 1 |
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| 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | X | 0 | 0 | 2 | 0 | 0 | 0 | 1 |
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| 0 | 1 | 1 | 2 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 |
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| 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | ? | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
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| 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | X | 1 | ? | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
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| 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | ? | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 1 |
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| 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 1 | 0 |
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| 1 | 1 | 1 | 2 | 1 | 2 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | ? | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 1 | 0 |
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| 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 3 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 1 | 0 |
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| 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | ? | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
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| 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | ? | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | ? | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | ? | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | X | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 0 | X | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | ? | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 0 | ? | ? | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 3 | 2 | 2 | 2 | 2 |
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| 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 0 | X | 0 | 0 | ? | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 3 | 2 | 2 | 2 | 2 |
Characters and character states are as listed in the text. Missing data are indicated by “?”. Character numbers are listed at the top of the table. Character states listed as “X” are polymorphic, where “X” = (0&1).
Figure 1Line drawing of cranidium, thoracic segment, and pygidium of four species traditionally assigned to the Eccoptochilinae.
1, Placoparina sedgwickii. 2, “Eccoptochile” scuticauda. 3, Eccoptochile clavigera. 4, Pseudosphaerexochus hemicranium. Modified from Treatise on Invertebrate Paleontology ©1959, courtesy of The Geological Society of America and The University of Kansas.
Figure 2A strict consensus and one of fourteen most parsimonious trees.
1, Results from parsimony analysis showing strict consensus of fourteen most parsimonious trees of length 119 steps. Tree graphics generated using FigTree v.1.3.1 [26] with genera labeled and paraphyletic genus identified using quotations following Wiley [27]. The following nodes of the tree were supported by the following jackknife confidence values (see text for jackknife procedure utilized): Node 2 = 100; Node 3 = 78; Node 4 = 92; Node 5 = 49; Node 6 = 30; Node 7 = 30; Node 8 = 42; Node 9 = 56. The following nodes of the tree were supported by the following bootstrap confidence values (see text for bootstrapping procedure utilized): Node 2 = 100; Node 3 = 29; Node 4 = 57; Node 6 = 7; Node 7 = 2; Node 8 = 8; Node 9 = 18.; 2, One of fourteen most parsimonious trees of length 119 steps. Most parsimonious character state reconstructions are: Node 1∶14[0,1,2]; 15[0,1]; 19[0,1]; 20[0,1]; 24[0,1]; 26[0,1]; 28[0,1]; 30[0,1]; 32[0,1]. Node 2∶19(1); 20(1); 26(1); 30(1); 32(1). Node 3∶1(1); 14(2); 31(1); 34(1). Node 4∶4(1); 8(1). Node 5∶13(1); 23(1). Node 6∶25(1); 28(0); 30(2). Node 8∶2(1); 3(1); 4(2); 5(1); 7(1); 10(1); 15(0); 18(1); 20(0); 21(1). Node 9∶27(1). Node 10∶6[0,2]; 12[0,1]; 31(0); 34(0). Node 11∶6(2); 12(1); 14(3); 33(1). Node 13∶16(1); 30(0); 32(0). Node 14∶6(2); 10(0). Node 15∶9(1); 11(1); 12(1); 18(0); 23(0); 25(0); 27(0). Node 16∶29(1); 30(3); 31(2); 32(2); 33(2); 34(2). Node 17∶14(0). Node 18∶26(0). Node 19∶11(0), 25(1). Node 20∶13[0,1]; 23(1). Node 21∶6(1); 10(0); 12(0). Node 22∶11(1); 17[0,1]; 19[0,1]. Node 23∶9(0); 13(0); 21(0); Parentheses denote unambiguous optimizations and brackets denote ambiguity.