Michael Golden1, Darren Martin. 1. Computational Biology Group, Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, Cape Town 4579, South Africa. michaelgolden0@gmail.com
Abstract
MOTIVATION: DOOSS (Data Overlaid On Secondary Structures) is a tool for visualizing annotated secondary structures of large single-stranded nucleotide sequences (such as full-length virus genomes). The purpose of this tool is to assist investigators in evaluating the biological relevance of secondary structures within particular sequences. AVAILABILITY AND IMPLEMENTATION: DOOSS is written in Java and is available from: http://dooss.computingforbiology.org CONTACT: michaelgolden0@gmail.com SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
MOTIVATION: DOOSS (Data Overlaid On Secondary Structures) is a tool for visualizing annotated secondary structures of large single-stranded nucleotide sequences (such as full-length virus genomes). The purpose of this tool is to assist investigators in evaluating the biological relevance of secondary structures within particular sequences. AVAILABILITY AND IMPLEMENTATION: DOOSS is written in Java and is available from: http://dooss.computingforbiology.org CONTACT: michaelgolden0@gmail.com SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Authors: Brejnev Muhizi Muhire; Michael Golden; Ben Murrell; Pierre Lefeuvre; Jean-Michel Lett; Alistair Gray; Art Y F Poon; Nobubelo Kwanele Ngandu; Yves Semegni; Emil Pavlov Tanov; Adérito Luis Monjane; Gordon William Harkins; Arvind Varsani; Dionne Natalie Shepherd; Darren Patrick Martin Journal: J Virol Date: 2013-11-27 Impact factor: 5.103