Literature DB >> 23171214

Unraveling the mechanisms of nonradiative deactivation in model peptides following photoexcitation of a phenylalanine residue.

Momir Mališ1, Yohan Loquais, Eric Gloaguen, Himansu S Biswal, François Piuzzi, Benjamin Tardivel, Valérie Brenner, Michel Broquier, Christophe Jouvet, Michel Mons, Nađa Došlić, Ivan Ljubić.   

Abstract

The mechanisms of nonradiative deactivation of a phenylalanine residue after near-UV photoexcitation have been investigated in an isolated peptide chain model (N-acetylphenylalaninylamide, NAPA) both experimentally and theoretically. Lifetime measurements at the origin of the first ππ* state of jet-cooled NAPA molecules have shown that (i) among the three most stable conformers of the molecule, the folded conformer NAPA B is ∼50-times shorter lived than the extended major conformer NAPA A and (ii) this lifetime is virtually insensitive to deuteration at the NH(2) and NH sites. Concurrent time-dependent density functional theory (TDDFT) based nonadiabatic dynamics simulations in the full dimensionality, carried out for the NAPA B conformer, provided direct insights on novel classes of ultrafast deactivation mechanisms, proceeding through several conical intersections and leading in fine to the ground state. These mechanisms are found to be triggered either (i) by a stretch of the N(Phe)H bond, which leads to an H-transfer to the ring, or (ii) by specific backbone amide distortions. The potential energy surfaces of the NAPA conformers along these critical pathways have been characterized more accurately using the coupled cluster doubles (CC2) method and shown to exhibit barriers that can be overcome with moderate excess energies. These results analyzed in the light of the experimental findings enabled us to assign the short lifetime of NAPA B conformer to a number of easily accessible exit channels from the initial ππ* surface, most importantly the one involving a transfer of electronic excitation to an nπ* surface, induced by distortions of the backbone peptide bond.

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Year:  2012        PMID: 23171214     DOI: 10.1021/ja3054942

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  4 in total

1.  Peptide deactivation: Spectroscopy meets theory.

Authors:  Wolfgang Domcke; Andrzej L Sobolewski
Journal:  Nat Chem       Date:  2013-04       Impact factor: 24.427

2.  A computational study on how structure influences the optical properties in model crystal structures of amyloid fibrils.

Authors:  Luca Grisanti; Dorothea Pinotsi; Ralph Gebauer; Gabriele S Kaminski Schierle; Ali A Hassanali
Journal:  Phys Chem Chem Phys       Date:  2017-02-01       Impact factor: 3.945

3.  Nonradiative Relaxation Mechanisms of UV Excited Phenylalanine Residues: A Comparative Computational Study.

Authors:  Momir Mališ; Nađa Došlić
Journal:  Molecules       Date:  2017-03-21       Impact factor: 4.411

4.  Excited States Computation of Models of Phenylalanine Protein Chains: TD-DFT and Composite CC2/TD-DFT Protocols.

Authors:  Marine Lebel; Thibaut Very; Eric Gloaguen; Benjamin Tardivel; Michel Mons; Valérie Brenner
Journal:  Int J Mol Sci       Date:  2022-01-06       Impact factor: 5.923

  4 in total

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