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Literature DB >> 23166244

Complete genome sequence of a duck astrovirus discovered in eastern China.

Linlin Chen¹, Qian Xu, Ruihua Zhang, Jingxin Li, Zhijing Xie, Yu Wang, Yanli Zhu, Shijin Jiang.

Abstract

We report here the complete genome sequence of a duck astrovirus (DAstV) isolated from a dead duckling in eastern China. Sequence analyses indicated that the genome of the astrovirus possessed a typical astrovirus organization. Comparison of the partial polymerase gene sequences of DAstV-1 and DAstV-2 showed that the astrovirus shared 94.4% and 64.2% nucleotide identity, respectively. The whole nucleotide sequence of the astrovirus had the highest homology with the sequence of DAstV-1 strain C-NGB (98.7%). Therefore, the strain we describe here is a DAstV-1 isolate.

Entities: Species

Mesh：

Year: 2012 PMID： 23166244 PMCID： PMC3503081 DOI： 10.1128/JVI.02637-12

Source DB: PubMed Journal: J Virol ISSN： 0022-538X Impact factor: 5.103

8 in total

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7. Complete sequence of a duck astrovirus associated with fatal hepatitis in ducklings.

Authors: Yu Fu; Meng Pan; Xiaoyan Wang; Yongliang Xu; Xiaoyu Xie; Nick J Knowles; Hanchun Yang; Dabing Zhang
Journal: J Gen Virol Date: 2009-03-04 Impact factor: 3.891

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Journal: Avian Pathol Date: 2009-02 Impact factor: 3.378

8 in total

1. Simultaneous detection of duck hepatitis A virus types 1 and 3, and of duck astrovirus type 1, by multiplex RT-PCR.

Authors: Linlin Chen; Mingjie Ma; Ruihua Zhang; Qian Xu; Xingkui Si; Yu Wang; Zhijing Xie; Shijin Jiang
Journal: Virol Sin Date: 2014-06 Impact factor: 4.327

Review 2. Human astroviruses.

Authors: Albert Bosch; Rosa M Pintó; Susana Guix
Journal: Clin Microbiol Rev Date: 2014-10 Impact factor: 26.132

Complete genome sequence of a duck astrovirus discovered in eastern China.

1. Astrovirus ribosomal frameshifting in an infection-transfection transient expression system.

2. Duck hepatitis: vaccination against two serological types.

3. RNA sequence of astrovirus: distinctive genomic organization and a putative retrovirus-like ribosomal frameshifting signal that directs the viral replicase synthesis.

4. Astrovirus-like particles associated with hepatitis in ducklings.

5. In vitro isolation, propagation, and characterization of duck hepatitis virus type III.

6. An outbreak of duck hepatitis type II in commercial ducks.

7. Complete sequence of a duck astrovirus associated with fatal hepatitis in ducklings.

8. Identification of chicken enterovirus-like viruses, duck hepatitis virus type 2 and duck hepatitis virus type 3 as astroviruses.

1. Simultaneous detection of duck hepatitis A virus types 1 and 3, and of duck astrovirus type 1, by multiplex RT-PCR.

Review 2. Human astroviruses.

3. A novel method to rescue and culture duck Astrovirus type 1 in vitro.

4. Identification of a Type-Specific Epitope in the ORF2 Protein of Duck Astrovirus Type 1.

5. Complete genome sequence analysis of chicken astrovirus isolate from India.

6. Pathogenicity of novel goose-origin astrovirus causing gout in goslings.

7. Isolation and characterization of a duck-origin goose astrovirus in China.

8. A quantitative loop-mediated isothermal amplification assay for detecting a novel goose astrovirus.