Literature DB >> 23165601

Experimental and database-transferred electron-density analysis and evaluation of electrostatic forces in coumarin-102 dye.

Yvon Bibila Mayaya Bisseyou1, Nouhza Bouhmaida, Benoit Guillot, Claude Lecomte, Noel Lugan, Noureddine Ghermani, Christian Jelsch.   

Abstract

The electron-density distribution of a new crystal form of coumarin-102, a laser dye, has been investigated using the Hansen-Coppens multipolar atom model. The charge density was refined versus high-resolution X-ray diffraction data collected at 100 K and was also constructed by transferring the charge density from the Experimental Library of Multipolar Atom Model (ELMAM2). The topology of the refined charge density has been analysed within the Bader `Atoms In Molecules' theory framework. Deformation electron-density peak heights and topological features indicate that the chromen-2-one ring system has a delocalized π-electron cloud in resonance with the N (amino) atom. The molecular electrostatic potential was estimated from both experimental and transferred multipolar models; it reveals an asymmetric character of the charge distribution across the molecule. This polarization effect is due to a substantial charge delocalization within the molecule. The molecular dipole moments derived from the experimental and transferred multipolar models are also compared with the liquid and gas-phase dipole moments. The substantial molecular dipole moment enhancements observed in the crystal environment originate from the crystal field and from intermolecular charge transfer induced and controlled by C-H···O and C-H···N intermolecular hydrogen bonds. The atomic forces were integrated over the atomic basins and compared for the two electron-density models.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 23165601     DOI: 10.1107/S0108768112042826

Source DB:  PubMed          Journal:  Acta Crystallogr B        ISSN: 0108-7681


  3 in total

Review 1.  Modelling the experimental electron density: only the synergy of various approaches can tackle the new challenges.

Authors:  Piero Macchi; Jean-Michel Gillet; Francis Taulelle; Javier Campo; Nicolas Claiser; Claude Lecomte
Journal:  IUCrJ       Date:  2015-05-14       Impact factor: 4.769

2.  Hydrogen atoms can be located accurately and precisely by x-ray crystallography.

Authors:  Magdalena Woińska; Simon Grabowsky; Paulina M Dominiak; Krzysztof Woźniak; Dylan Jayatilaka
Journal:  Sci Adv       Date:  2016-05-27       Impact factor: 14.136

3.  The enrichment ratio of atomic contacts in crystals, an indicator derived from the Hirshfeld surface analysis.

Authors:  Christian Jelsch; Krzysztof Ejsmont; Loïc Huder
Journal:  IUCrJ       Date:  2014-02-28       Impact factor: 4.769

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.