Literature DB >> 23165209

A coordinated codon-dependent regulation of translation by Elongator.

Fanelie Bauer1, Damien Hermand.   

Abstract

More than a decade ago, the purification of the form of the RNA polymerase II (PolII) engaged in elongation led to the discovery of an associated, multi-subunit (Elp1-6) complex named "Elongator" by the Svejstrup lab. Although further evidence supported the original notion that Elongator is involved in transcription, Elongator lacked some of the expected features for a regulator of the elongating PolII. The discovery by the Byström lab, based on genetic dissection, that Elongator is pivotal for tRNA modifications, and that all the reported phenotypes of Elongator mutants are suppressed by the overexpression of two tRNAs added to the confusion. The increasing range of both potential substrates and biological processes regulated by Elongator in higher eukaryotes indicates that the major challenge of the field is to determine the biologically relevant function of Elongator. Our recent proteome-wide study in fission yeast supports a coordinated codon-dependent regulation of translation by Elongator. Here we provide additional analyses extending this hypothesis to budding yeast and worm.

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Year:  2012        PMID: 23165209      PMCID: PMC3562296          DOI: 10.4161/cc.22689

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  37 in total

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3.  The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity.

Authors:  Monique Dewez; Fanélie Bauer; Marc Dieu; Martine Raes; Jean Vandenhaute; Damien Hermand
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-07       Impact factor: 11.205

4.  Transcription impairment and cell migration defects in elongator-depleted cells: implication for familial dysautonomia.

Authors:  Pierre Close; Nicola Hawkes; Isabelle Cornez; Catherine Creppe; Charles A Lambert; Bernard Rogister; Ulrich Siebenlist; Marie-Paule Merville; Susan A Slaugenhaupt; Vincent Bours; Jesper Q Svejstrup; Alain Chariot
Journal:  Mol Cell       Date:  2006-05-19       Impact factor: 17.970

5.  Ubiquitin-related modifier Urm1 acts as a sulphur carrier in thiolation of eukaryotic transfer RNA.

Authors:  Sebastian Leidel; Patrick G A Pedrioli; Tamara Bucher; Renée Brost; Michael Costanzo; Alexander Schmidt; Ruedi Aebersold; Charles Boone; Kay Hofmann; Matthias Peter
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6.  A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae.

Authors:  Bo Huang; Jian Lu; Anders S Byström
Journal:  RNA       Date:  2008-08-28       Impact factor: 4.942

7.  Potential role of tubulin acetylation and microtubule-based protein trafficking in familial dysautonomia.

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9.  Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions.

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10.  Cdc18/CDC6 activates the Rad3-dependent checkpoint in the fission yeast.

Authors:  Naomi Fersht; Damien Hermand; Jacqueline Hayles; Paul Nurse
Journal:  Nucleic Acids Res       Date:  2007-08-08       Impact factor: 16.971

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  26 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-30       Impact factor: 11.205

2.  Developmental regulation of neuronal gene expression by Elongator complex protein 1 dosage.

Authors:  Elisabetta Morini; Dadi Gao; Emily M Logan; Monica Salani; Aram J Krauson; Anil Chekuri; Yei-Tsung Chen; Ashok Ragavendran; Probir Chakravarty; Serkan Erdin; Alexei Stortchevoi; Jesper Q Svejstrup; Michael E Talkowski; Susan A Slaugenhaupt
Journal:  J Genet Genomics       Date:  2021-12-09       Impact factor: 5.723

3.  BGP-15 prevents the death of neurons in a mouse model of familial dysautonomia.

Authors:  Sarah B Ohlen; Magdalena L Russell; Michael J Brownstein; Frances Lefcort
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-24       Impact factor: 11.205

4.  A Platform for Discovery and Quantification of Modified Ribonucleosides in RNA: Application to Stress-Induced Reprogramming of tRNA Modifications.

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Journal:  Methods Enzymol       Date:  2015-07-17       Impact factor: 1.600

Review 5.  Role of RNA modifications in brain and behavior.

Authors:  Y Jung; D Goldman
Journal:  Genes Brain Behav       Date:  2018-03       Impact factor: 3.449

6.  Sensory and autonomic deficits in a new humanized mouse model of familial dysautonomia.

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Review 8.  Biosynthesis and functions of sulfur modifications in tRNA.

Authors:  Naoki Shigi
Journal:  Front Genet       Date:  2014-04-02       Impact factor: 4.599

9.  Distribution of ADAT-Dependent Codons in the Human Transcriptome.

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10.  A system of RNA modifications and biased codon use controls cellular stress response at the level of translation.

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Journal:  Chem Res Toxicol       Date:  2014-01-27       Impact factor: 3.739

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