Literature DB >> 23153489

A new direction for gene looping.

Carlo E Randise-Hinchliff1, Jason H Brickner.   

Abstract

Upon binding to a promoter, RNA polymerase II can synthesize either a coding mRNA or a divergently transcribed noncoding RNA. In a recent issue of Science, Tan-Wong et al. (2012) find that intragenic looping increases the proper orientation of RNA polymerase II, reducing the production of divergent noncoding transcripts.
Copyright © 2012 Elsevier Inc. All rights reserved.

Entities:  

Year:  2012        PMID： 23153489      PMCID： PMC3532906          DOI： 10.1016/j.devcel.2012.10.024

Source DB:  PubMed          Journal:  Dev Cell        ISSN： 1534-5807            Impact factor:   12.270


  10 in total

Review 1.  Enhancer and promoter interactions-long distance calls.

Authors:  Ivan Krivega; Ann Dean
Journal:  Curr Opin Genet Dev       Date:  2011-12-12       Impact factor: 5.578

2.  Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3.

Authors:  John T Arigo; Daniel E Eyler; Kristina L Carroll; Jeffry L Corden
Journal:  Mol Cell       Date:  2006-09-15       Impact factor: 17.970

Review 3.  Control of eukaryotic gene expression: gene loops and transcriptional memory.

Authors:  Michael Hampsey; Badri Nath Singh; Athar Ansari; Jean-Philippe Lainé; Shankarling Krishnamurthy
Journal:  Adv Enzyme Regul       Date:  2010-10-29

4.  Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.

Authors:  Jurgi Camblong; Nahid Iglesias; Céline Fickentscher; Guennaelle Dieppois; Françoise Stutz
Journal:  Cell       Date:  2007-11-16       Impact factor: 41.582

5.  A transcription-independent role for TFIIB in gene looping.

Authors:  Badri Nath Singh; Michael Hampsey
Journal:  Mol Cell       Date:  2007-09-07       Impact factor: 17.970

Review 6.  Divergent transcription: a new feature of active promoters.

Authors:  Amy C Seila; Leighton J Core; John T Lis; Phillip A Sharp
Journal:  Cell Cycle       Date:  2009-08-19       Impact factor: 4.534

7.  Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells.

Authors:  Katie L Zobeck; Martin S Buckley; Warren R Zipfel; John T Lis
Journal:  Mol Cell       Date:  2010-12-22       Impact factor: 17.970

8.  Gene loops enhance transcriptional directionality.

Authors:  Sue Mei Tan-Wong; Judith B Zaugg; Jurgi Camblong; Zhenyu Xu; David W Zhang; Hannah E Mischo; Aseem Z Ansari; Nicholas M Luscombe; Lars M Steinmetz; Nick J Proudfoot
Journal:  Science       Date:  2012-09-27       Impact factor: 47.728

9.  Gene loops juxtapose promoters and terminators in yeast.

Authors:  Justin M O'Sullivan; Sue Mei Tan-Wong; Antonin Morillon; Barbara Lee; Joel Coles; Jane Mellor; Nick J Proudfoot
Journal:  Nat Genet       Date:  2004-08-15       Impact factor: 38.330

10.  Bidirectional promoters generate pervasive transcription in yeast.

Authors:  Zhenyu Xu; Wu Wei; Julien Gagneur; Fabiana Perocchi; Sandra Clauder-Münster; Jurgi Camblong; Elisa Guffanti; Françoise Stutz; Wolfgang Huber; Lars M Steinmetz
Journal:  Nature       Date:  2009-01-25       Impact factor: 49.962
  10 in total
  2 in total

1.  The landscape of accessible chromatin in mammalian preimplantation embryos.

Authors:  Jingyi Wu; Bo Huang; He Chen; Qiangzong Yin; Yang Liu; Yunlong Xiang; Bingjie Zhang; Bofeng Liu; Qiujun Wang; Weikun Xia; Wenzhi Li; Yuanyuan Li; Jing Ma; Xu Peng; Hui Zheng; Jia Ming; Wenhao Zhang; Jing Zhang; Geng Tian; Feng Xu; Zai Chang; Jie Na; Xuerui Yang; Wei Xie
Journal:  Nature       Date:  2016-06-15       Impact factor: 49.962

2.  The landscape of accessible chromatin in bovine oocytes and early embryos.

Authors:  Hao Ming; Jiangwen Sun; Rolando Pasquariello; Lauren Gatenby; Jason R Herrick; Ye Yuan; Carlos R Pinto; Kenneth R Bondioli; Rebecca L Krisher; Zongliang Jiang
Journal:  Epigenetics       Date:  2020-07-20       Impact factor: 4.528
  2 in total

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