Literature DB >> 23151793

Identification and characterization of a gene encoding a putative lysophosphatidyl acyltransferase from Arachis hypogaea.

Si-Long Chen1, Jia-Quan Huang, Yong Lei, Yue-Ting Zhang, Xiao-Ping Ren, Yu-Ning Chen, Hui-Fang Jiang, Li-Ying Yan, Yu-Rong Li, Bo-Shou Liao.   

Abstract

Lysophosphatidyl acyltransferase (LPAT) is the important enzyme responsible for the acylation of lysophosphatidic acid (LPA), leading to the generation of phosphatidic acid (PA) in plant. Its encoding gene is an essential candidate for oil crops to improve oil composition and increase seed oil content through genetic engineering. In this study, a full length AhLPAT4 gene was isolated via cDNA library screening and rapid amplification of cDNA ends (RACE); our data demonstrated that AhLPAT4 had 1631 nucleotides, encoding a putative 43.8 kDa protein with 383 amino acid residues. The deduced protein included a conserved acyltransferase domain and four motifs (I–IV) with putative LPA and acyl-CoA catalytic and binding sites. Bioinformatic analysis indicated that AhLPAT4 contained four transmembrane domains (TMDs), localized to the endoplasmic reticulum (ER) membrane; detailed analysis indicated that motif I and motifs II–III in AhLPAT4 were separated by the third TMD, which located on cytosolic and ER luminal side respectively, and hydrophobic residues on the surface of AhLPAT4 protein fold to form a hydrophobic tunnel to accommodate the acyl chain. Subcellular localization analysis confirmed that AhLPAT4 was a cytoplasm protein.Phylogenetic analysis revealed that AhLPAT4 had a high homology (63.7–78.3%) with putative LPAT4 proteins from Glycine max, Arabidopsis thaliana and Ricinus communis. AhLPAT4 was ubiquitously expressed in diverse tissues except in flower, which is almost undetectable. The expression analysis in different developmental stages in peanut seeds indicated that AhLPAT4 did not coincide with oil accumulation.

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Year:  2012        PMID: 23151793     DOI: 10.1007/s12038-012-9277-4

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  36 in total

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Review 4.  Lipid biosynthesis.

Authors:  J Ohlrogge; J Browse
Journal:  Plant Cell       Date:  1995-07       Impact factor: 11.277

5.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

Authors:  Koichiro Tamura; Daniel Peterson; Nicholas Peterson; Glen Stecher; Masatoshi Nei; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

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Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

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Journal:  Plant Cell       Date:  1997-06       Impact factor: 11.277

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Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

9.  Plastid lysophosphatidyl acyltransferase is essential for embryo development in Arabidopsis.

Authors:  Hyun Uk Kim; Anthony H C Huang
Journal:  Plant Physiol       Date:  2004-02-19       Impact factor: 8.340

10.  Identification of Transcripts Involved in Resistance Responses to Leaf Spot Disease Caused by Cercosporidium personatum in Peanut (Arachis hypogaea).

Authors:  M Luo; P Dang; M G Bausher; C C Holbrook; R D Lee; R E Lynch; B Z Guo
Journal:  Phytopathology       Date:  2005-04       Impact factor: 4.025

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  5 in total

1.  Genome-wide identification and evolutionary analysis of algal LPAT genes involved in TAG biosynthesis using bioinformatic approaches.

Authors:  Namrata Misra; Prasanna Kumar Panda; Bikram Kumar Parida
Journal:  Mol Biol Rep       Date:  2014-10-04       Impact factor: 2.316

2.  Genome-wide association mapping and Identification of candidate genes for fatty acid composition in Brassica napus L. using SNP markers.

Authors:  Cunmin Qu; Ledong Jia; Fuyou Fu; Huiyan Zhao; Kun Lu; Lijuan Wei; Xinfu Xu; Ying Liang; Shimeng Li; Rui Wang; Jiana Li
Journal:  BMC Genomics       Date:  2017-03-14       Impact factor: 3.969

Review 3.  The Structure and Function of Acylglycerophosphate Acyltransferase 4/ Lysophosphatidic Acid Acyltransferase Delta (AGPAT4/LPAATδ).

Authors:  Mikhail A Zhukovsky; Angela Filograna; Alberto Luini; Daniela Corda; Carmen Valente
Journal:  Front Cell Dev Biol       Date:  2019-08-02

4.  The Peanut (Arachis hypogaea L.) Gene AhLPAT2 Increases the Lipid Content of Transgenic Arabidopsis Seeds.

Authors:  Silong Chen; Yong Lei; Xian Xu; Jiaquan Huang; Huifang Jiang; Jin Wang; Zengshu Cheng; Jianan Zhang; Yahui Song; Boshou Liao; Yurong Li
Journal:  PLoS One       Date:  2015-08-24       Impact factor: 3.240

5.  PrLPAAT4, a Putative Lysophosphatidic Acid Acyltransferase from Paeonia rockii, Plays an Important Role in Seed Fatty Acid Biosynthesis.

Authors:  Qingyu Zhang; Rui Yu; Daoyang Sun; Zhangzhen Bai; Hong Li; Liang Xue; Yanlong Zhang; Lixin Niu
Journal:  Molecules       Date:  2017-10-10       Impact factor: 4.411

  5 in total

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