Literature DB >> 23150486

Writing and rewriting the epigenetic code of cancer cells: from engineered proteins to small molecules.

Pilar Blancafort1, Jian Jin, Stephen Frye.   

Abstract

The epigenomic era has revealed a well-connected network of molecular processes that shape the chromatin landscape. These processes comprise abnormal methylomes, transcriptosomes, genome-wide histone post-transcriptional modifications patterns, histone variants, and noncoding RNAs. The mapping of these processes in large scale by chromatin immunoprecipitation sequencing and other methodologies in both cancer and normal cells reveals novel therapeutic opportunities for anticancer intervention. The goal of this minireview is to summarize pharmacological strategies to modify the epigenetic landscape of cancer cells. These approaches include the use of novel small molecule inhibitors of epigenetic processes specifically deregulated in cancer cells and the design of engineered proteins able to stably reprogram the epigenetic code in cancer cells in a way that is similar to normal cells.

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Year:  2012        PMID: 23150486      PMCID: PMC3920093          DOI: 10.1124/mol.112.080697

Source DB:  PubMed          Journal:  Mol Pharmacol        ISSN: 0026-895X            Impact factor:   4.436


  204 in total

Review 1.  The adjustable nucleosome: an epigenetic signaling module.

Authors:  Bryan M Turner
Journal:  Trends Genet       Date:  2012-05-24       Impact factor: 11.639

2.  Heritable gene repression through the action of a directed DNA methyltransferase at a chromosomal locus.

Authors:  Alexander E Smith; Paul J Hurd; Andrew J Bannister; Tony Kouzarides; Kevin G Ford
Journal:  J Biol Chem       Date:  2008-02-13       Impact factor: 5.157

3.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

Review 4.  Coordinated chromatin control: structural and functional linkage of DNA and histone methylation.

Authors:  Xiaodong Cheng; Robert M Blumenthal
Journal:  Biochemistry       Date:  2010-04-13       Impact factor: 3.162

Review 5.  Current and potential anticancer drugs targeting members of the UHRF1 complex including epigenetic modifiers.

Authors:  Motoko Unoki
Journal:  Recent Pat Anticancer Drug Discov       Date:  2011-01       Impact factor: 4.169

6.  Reactivation of MASPIN in non-small cell lung carcinoma (NSCLC) cells by artificial transcription factors (ATFs).

Authors:  Adriana S Beltran; Pilar Blancafort
Journal:  Epigenetics       Date:  2011-02-01       Impact factor: 4.528

7.  Maspin, a serpin with tumor-suppressing activity in human mammary epithelial cells.

Authors:  Z Zou; A Anisowicz; M J Hendrix; A Thor; M Neveu; S Sheng; K Rafidi; E Seftor; R Sager
Journal:  Science       Date:  1994-01-28       Impact factor: 47.728

8.  Meta-analysis of human lung cancer microRNA expression profiling studies comparing cancer tissues with normal tissues.

Authors:  Peng Guan; Zhihua Yin; Xuelian Li; Wei Wu; Baosen Zhou
Journal:  J Exp Clin Cancer Res       Date:  2012-06-06

9.  Suppression of breast tumor growth and metastasis by an engineered transcription factor.

Authors:  Adriana S Beltran; Angela Russo; Haydee Lara; Cheng Fan; Paul M Lizardi; Pilar Blancafort
Journal:  PLoS One       Date:  2011-09-13       Impact factor: 3.240

10.  CpG island hypermethylation of BRCA1 and loss of pRb as co-occurring events in basal/triple-negative breast cancer.

Authors:  Olafur Andri Stefansson; Jon Gunnlaugur Jonasson; Kristrun Olafsdottir; Holmfridur Hilmarsdottir; Gudridur Olafsdottir; Manel Esteller; Oskar Thor Johannsson; Jorunn Erla Eyfjord
Journal:  Epigenetics       Date:  2011-05       Impact factor: 4.528

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  14 in total

Review 1.  Beyond standard therapy: drugs under investigation for the treatment of gastrointestinal stromal tumor.

Authors:  Hani J Alturkmani; Ziyan Y Pessetto; Andrew K Godwin
Journal:  Expert Opin Investig Drugs       Date:  2015-06-22       Impact factor: 6.206

2.  Exploiting an allosteric binding site of PRMT3 yields potent and selective inhibitors.

Authors:  Feng Liu; Fengling Li; Anqi Ma; Elena Dobrovetsky; Aiping Dong; Cen Gao; Ilia Korboukh; Jing Liu; David Smil; Peter J Brown; Stephen V Frye; Cheryl H Arrowsmith; Matthieu Schapira; Masoud Vedadi; Jian Jin
Journal:  J Med Chem       Date:  2013-02-27       Impact factor: 7.446

3.  Histones: Controlling Tumor Signaling Circuitry.

Authors:  Manoela D Martins; Rogerio M Castilho
Journal:  J Carcinog Mutagen       Date:  2013-07-29

Review 4.  Epigenetic regulation of persistent pain.

Authors:  Guang Bai; Ke Ren; Ronald Dubner
Journal:  Transl Res       Date:  2014-05-29       Impact factor: 7.012

Review 5.  Epigenome engineering in cancer: fairytale or a realistic path to the clinic?

Authors:  Fahimeh Falahi; Agustin Sgro; Pilar Blancafort
Journal:  Front Oncol       Date:  2015-02-06       Impact factor: 6.244

6.  Synthetic epigenetics-towards intelligent control of epigenetic states and cell identity.

Authors:  Tomasz P Jurkowski; Mirunalini Ravichandran; Peter Stepper
Journal:  Clin Epigenetics       Date:  2015-03-04       Impact factor: 6.551

7.  Computational and experimental methods to decipher the epigenetic code.

Authors:  Stefano de Pretis; Mattia Pelizzola
Journal:  Front Genet       Date:  2014-09-23       Impact factor: 4.599

Review 8.  A comprehensive view of the epigenetic landscape. Part II: Histone post-translational modification, nucleosome level, and chromatin regulation by ncRNAs.

Authors:  Anna Sadakierska-Chudy; Małgorzata Filip
Journal:  Neurotox Res       Date:  2014-12-17       Impact factor: 3.911

Review 9.  Regulation of epigenetic traits of the glutathione S-transferase P1 gene: from detoxification toward cancer prevention and diagnosis.

Authors:  Michael Schnekenburger; Tommy Karius; Marc Diederich
Journal:  Front Pharmacol       Date:  2014-07-16       Impact factor: 5.810

10.  Novel adeno-associated viral vector delivering the utrophin gene regulator jazz counteracts dystrophic pathology in mdx mice.

Authors:  Georgios Strimpakos; Nicoletta Corbi; Cinzia Pisani; Maria Grazia Di Certo; Annalisa Onori; Siro Luvisetto; Cinzia Severini; Francesca Gabanella; Lucia Monaco; Elisabetta Mattei; Claudio Passananti
Journal:  J Cell Physiol       Date:  2014-09       Impact factor: 6.384

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