Literature DB >> 23150433

Detecting and quantifying p53 isoforms at mRNA level in cell lines and tissues.

Marie P Khoury1, Virginie Marcel, Kenneth Fernandes, Alexandra Diot, David P Lane, Jean-Christophe Bourdon.   

Abstract

The TP53 gene expresses at least nine different mRNA variants (p53 isoform mRNAs), including the one encoding the canonical p53 tumor suppressor protein. We have developed scientific tools to specifically detect and quantify p53 isoform expression at mRNA level by nested RT-PCR (reverse transcription-polymerase chain reaction) and quantitative real-time RT-PCR (RT-qPCR using the TaqMan(®) chemistry). Here, we describe these two methods, while highlighting essential points with regard to the analysis of p53 isoform mRNA expression.

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Year:  2013        PMID: 23150433     DOI: 10.1007/978-1-62703-236-0_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  10 in total

1.  The Balance between p53 Isoforms Modulates the Efficiency of HIV-1 Infection in Macrophages.

Authors:  Yann Breton; Corinne Barat; Michel J Tremblay
Journal:  J Virol       Date:  2021-08-11       Impact factor: 5.103

Review 2.  p53 Isoforms: Key Regulators of the Cell Fate Decision.

Authors:  Sebastien M Joruiz; Jean-Christophe Bourdon
Journal:  Cold Spring Harb Perspect Med       Date:  2016-08-01       Impact factor: 6.915

Review 3.  Analysis of TP53 mutation status in human cancer cell lines: a reassessment.

Authors:  Bernard Leroy; Luc Girard; Antoinette Hollestelle; John D Minna; Adi F Gazdar; Thierry Soussi
Journal:  Hum Mutat       Date:  2014-05-06       Impact factor: 4.878

4.  TP53 drives invasion through expression of its Δ133p53β variant.

Authors:  Gilles Gadea; Nikola Arsic; Kenneth Fernandes; Alexandra Diot; Sébastien M Joruiz; Samer Abdallah; Valerie Meuray; Stéphanie Vinot; Christelle Anguille; Judit Remenyi; Marie P Khoury; Philip R Quinlan; Colin A Purdie; Lee B Jordan; Frances V Fuller-Pace; Marion de Toledo; Maïlys Cren; Alastair M Thompson; Jean-Christophe Bourdon; Pierre Roux
Journal:  Elife       Date:  2016-09-15       Impact factor: 8.140

5.  Identification of nonsense-mediated mRNA decay pathway as a critical regulator of p53 isoform β.

Authors:  Lauren E Cowen; Yi Tang
Journal:  Sci Rep       Date:  2017-12-13       Impact factor: 4.379

6.  SRSF1 promotes vascular smooth muscle cell proliferation through a Δ133p53/EGR1/KLF5 pathway.

Authors:  Ning Xie; Min Chen; Rilei Dai; Yan Zhang; Hanqing Zhao; Zhiming Song; Lufeng Zhang; Zhenyan Li; Yuanqing Feng; Hua Gao; Li Wang; Ting Zhang; Rui-Ping Xiao; Jianxin Wu; Chun-Mei Cao
Journal:  Nat Commun       Date:  2017-08-11       Impact factor: 14.919

7.  The dominant-negative interplay between p53, p63 and p73: A family affair.

Authors:  Olivier Billant; Alice Léon; Solenn Le Guellec; Gaëlle Friocourt; Marc Blondel; Cécile Voisset
Journal:  Oncotarget       Date:  2016-10-25

8.  Expression of p53 protein isoforms predicts survival in patients with multiple myeloma.

Authors:  Elizabeta A Rojas; Luis A Corchete; Cristina De Ramón; Patryk Krzeminski; Dalia Quwaider; Ramón García-Sanz; Joaquín Martínez-López; Albert Oriol; Laura Rosiñol; Joan Bladé; Juan José Lahuerta; Jesús F San Miguel; Marcos González; María Victoria Mateos; Jean-Christophe Bourdon; Irena Misiewicz-Krzeminska; Norma C Gutiérrez
Journal:  Am J Hematol       Date:  2022-03-01       Impact factor: 13.265

Review 9.  Role of p53 isoforms and aggregations in cancer.

Authors:  SeJin Kim; Seong Soo A An
Journal:  Medicine (Baltimore)       Date:  2016-06       Impact factor: 1.889

10.  Damage-inducible intragenic demethylation of the human TP53 tumor suppressor gene is associated with transcription from an alternative intronic promoter.

Authors:  James Blackburn; Daniel L Roden; Robert Ng; Jianmin Wu; Alexis Bosman; Richard J Epstein
Journal:  Mol Carcinog       Date:  2015-12-16       Impact factor: 4.784

  10 in total

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