Literature DB >> 23148131

Reply to Comment on "Sloppy models, parameter uncertainty, and the role of experimental design"

David R Hagen1, Joshua F Apgar, David K Witmer, Forest M White, Bruce Tidor.   

Abstract

Year:  2011        PMID： 23148131      PMCID： PMC3495004          DOI： 10.1039/C1MB05200D

Source DB:  PubMed          Journal:  Mol Biosyst        ISSN： 1742-2051


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  7 in total

1.  Optimal sampling time selection for parameter estimation in dynamic pathway modeling.

Authors:  Zoltán Kutalik; Kwang-Hyun Cho; Olaf Wolkenhauer
Journal:  Biosystems       Date:  2004-07       Impact factor: 1.973

2.  A kernel-based method to determine optimal sampling times for the simultaneous estimation of the parameters of rival mathematical models.

Authors:  Brecht M R Donckels; Dirk J W De Pauw; Peter A Vanrolleghem; Bernard De Baets
Journal:  J Comput Chem       Date:  2009-10       Impact factor: 3.376

3.  The statistical mechanics of complex signaling networks: nerve growth factor signaling.

Authors:  K S Brown; C C Hill; G A Calero; C R Myers; K H Lee; J P Sethna; R A Cerione
Journal:  Phys Biol       Date:  2004-12       Impact factor: 2.583

4.  Comment on "Sloppy models, parameter uncertainty, and the role of experimental design".

Authors:  Ricky Chachra; Mark K Transtrum; James P Sethna
Journal:  Mol Biosyst       Date:  2011-04-19

5.  Sloppy models, parameter uncertainty, and the role of experimental design.

Authors:  Joshua F Apgar; David K Witmer; Forest M White; Bruce Tidor
Journal:  Mol Biosyst       Date:  2010-06-17

6.  Optimal experimental design in an epidermal growth factor receptor signalling and down-regulation model.

Authors:  F P Casey; D Baird; Q Feng; R N Gutenkunst; J J Waterfall; C R Myers; K S Brown; R A Cerione; J P Sethna
Journal:  IET Syst Biol       Date:  2007-05       Impact factor: 1.615

7.  Universally sloppy parameter sensitivities in systems biology models.

Authors:  Ryan N Gutenkunst; Joshua J Waterfall; Fergal P Casey; Kevin S Brown; Christopher R Myers; James P Sethna
Journal:  PLoS Comput Biol       Date:  2007-08-15       Impact factor: 4.475
  7 in total
  2 in total

Review 1.  Reverse engineering and identification in systems biology: strategies, perspectives and challenges.

Authors:  Alejandro F Villaverde; Julio R Banga
Journal:  J R Soc Interface       Date:  2013-12-04       Impact factor: 4.118

2.  Convergence in parameters and predictions using computational experimental design.

Authors:  David R Hagen; Jacob K White; Bruce Tidor
Journal:  Interface Focus       Date:  2013-08-06       Impact factor: 3.906
  2 in total

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