Literature DB >> 23144419

Genome sequence of Roseomonas sp. strain B5, a quorum-quenching N-acylhomoserine lactone-degrading bacterium isolated from Malaysian tropical soil.

Jian-Woon Chen1, Han Ming Gan, Wai-Fong Yin, Kok-Gan Chan.   

Abstract

Roseomonas sp. strain B5 was isolated from Malaysian tropical soil that showed N-acylhomoserine lactone degradation. This is the first genome announcement of a member from the genus of Roseomonas and the first report on the quorum-quenching activity of Roseomonas spp.

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Year:  2012        PMID： 23144419      PMCID： PMC3497497          DOI： 10.1128/JB.01866-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  18 in total

1.  UniProt: the Universal Protein knowledgebase.

Authors:  Rolf Apweiler; Amos Bairoch; Cathy H Wu; Winona C Barker; Brigitte Boeckmann; Serenella Ferro; Elisabeth Gasteiger; Hongzhan Huang; Rodrigo Lopez; Michele Magrane; Maria J Martin; Darren A Natale; Claire O'Donovan; Nicole Redaschi; Lai-Su L Yeh
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

3.  Peritonitis due to Roseomonas fauriae in a patient undergoing continuous ambulatory peritoneal dialysis.

Authors:  E Bibashi; D Sofianou; K Kontopoulou; E Mitsopoulos; E Kokolina
Journal:  J Clin Microbiol       Date:  2000-01       Impact factor: 5.948

4.  Roseomonas lacus sp. nov., isolated from freshwater lake sediment.

Authors:  Cheng-Ying Jiang; Xin Dai; Bao-Jun Wang; Yu-Guang Zhou; Shuang-Jiang Liu
Journal:  Int J Syst Evol Microbiol       Date:  2006-01       Impact factor: 2.747

5.  Roseomonas, a new genus associated with bacteremia and other human infections.

Authors:  J D Rihs; D J Brenner; R E Weaver; A G Steigerwalt; D G Hollis; V L Yu
Journal:  J Clin Microbiol       Date:  1993-12       Impact factor: 5.948

Review 6.  Pink-pigmented non-fermentative gram-negative rods associated with human infections: a clinical and diagnostic challenge.

Authors:  R Hogue; M Graves; S Moler; J M Janda
Journal:  Infection       Date:  2007-06       Impact factor: 3.553

7.  Clinical significance of Roseomonas species isolated from catheter and blood samples: analysis of 36 cases in patients with cancer.

Authors:  Indra Dé; Kenneth V I Rolston; Xiang Y Han
Journal:  Clin Infect Dis       Date:  2004-05-07       Impact factor: 9.079

8.  Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.

Authors:  Ana Conesa; Stefan Götz; Juan Miguel García-Gómez; Javier Terol; Manuel Talón; Montserrat Robles
Journal:  Bioinformatics       Date:  2005-08-04       Impact factor: 6.937

Review 9.  Quorum quenching revisited--from signal decays to signalling confusion.

Authors:  Kar-Wai Hong; Chong-Lek Koh; Choon-Kook Sam; Wai-Fong Yin; Kok-Gan Chan
Journal:  Sensors (Basel)       Date:  2012-04-10       Impact factor: 3.576

10.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
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  8 in total

1.  Quorum sensing system and influence on food spoilage in Pseudomonas fluorescens from turbot.

Authors:  Tingting Li; Bing Yang; Xuepeng Li; Jianrong Li; Guohua Zhao; Jianquan Kan
Journal:  J Food Sci Technol       Date:  2018-05-21       Impact factor: 2.701

2.  Metagenomic analysis of the dust particles collected from the suction tube and the suction funnel of a dermatological laser smoke evacuator system.

Authors:  Ga-Eun Lee; Jin Ju Kim; Hei Sung Kim; Woo Jun Sul
Journal:  Lasers Med Sci       Date:  2020-10-20       Impact factor: 3.161

3.  Genome Anatomy of Streptococcus parasanguinis Strain C1A, Isolated from a Patient with Acute Exacerbation of Chronic Obstructive Pulmonary Disease, Reveals Unusual Genomic Features.

Authors:  Kok-Gan Chan; Kim Tien Ng; Yong Kek Pang; Teik Min Chong; Adeeba Kamarulzaman; Wai-Fong Yin; Kok Keng Tee
Journal:  Genome Announc       Date:  2015-05-28

4.  Degradation of bacterial quorum sensing signaling molecules by the microscopic yeast Trichosporon loubieri isolated from tropical wetland waters.

Authors:  Cheng-Siang Wong; Chong-Lek Koh; Choon-Kook Sam; Jian Woon Chen; Yee Meng Chong; Wai-Fong Yin; Kok-Gan Chan
Journal:  Sensors (Basel)       Date:  2013-09-25       Impact factor: 3.576

5.  Pseudomonas cremoricolorata strain ND07 produces N-acyl homoserine lactones as quorum sensing molecules.

Authors:  Nina Yusrina Muhamad Yunos; Wen-Si Tan; Chong-Lek Koh; Choon-Kook Sam; Nur Izzati Mohamad; Pui-Wan Tan; Tan-Guan-Sheng Adrian; Wai-Fong Yin; Kok-Gan Chan
Journal:  Sensors (Basel)       Date:  2014-06-30       Impact factor: 3.576

6.  Novel quorum quenching enzymes identified from draft genome of Roseomonas sp. TAS13.

Authors:  Eri Nasuno; Tomohiro Suzuki; Ryoko Suzuki; Chigusa Okano; Takeshi Kurokura; Ken-Ichi Iimura; Norihiro Kato
Journal:  Genom Data       Date:  2017-02-21

7.  Whole-Genome Sequence and Fosfomycin Resistance of Bacillus sp. Strain G3(2015) Isolated from Seawater off the Coast of Malaysia.

Authors:  Xin-Yue Chan; Jian-Woon Chen; Tan-Guan-Sheng Adrian; Kar-Wai Hong; Chien-Yi Chang; Wai-Fong Yin; Kok-Gan Chan
Journal:  Genome Announc       Date:  2017-03-30

8.  Pantoea sp. isolated from tropical fresh water exhibiting N-acyl homoserine lactone production.

Authors:  Wen-Si Tan; Nina Yusrina Muhamad Yunos; Pui-Wan Tan; Nur Izzati Mohamad; Tan-Guan-Sheng Adrian; Wai-Fong Yin; Kok-Gan Chan
Journal:  ScientificWorldJournal       Date:  2014-08-12
  8 in total

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