Literature DB >> 23144389

Draft genome sequence of Brevibacillus brevis strain X23, a biocontrol agent against bacterial wilt.

Wu Chen1, Yunsheng Wang, Dingjun Li, Lin Li, Qiming Xiao, Qingming Zhou.   

Abstract

Brevibacillus brevis X23 is an appropriate biocontrol agent against bacterial wilt caused by Ralstonia solanacearum. We report herein the draft genome sequence (6,566,879 bp) and a circular plasmid (6,600 bp) of B. brevis X23, data which may be helpful for mining the antagonistic activity against R. solanacearum.

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Year:  2012        PMID： 23144389      PMCID： PMC3497470          DOI： 10.1128/JB.01312-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  Identifying bacterial genes and endosymbiont DNA with Glimmer.

Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

2.  SOAP2: an improved ultrafast tool for short read alignment.

Authors:  Ruiqiang Li; Chang Yu; Yingrui Li; Tak-Wah Lam; Siu-Ming Yiu; Karsten Kristiansen; Jun Wang
Journal:  Bioinformatics       Date:  2009-06-03       Impact factor: 6.937

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Experimental basis for a stable plasmid, pLS30, to shuttle between Bacillus subtilis species by conjugational transfer.

Authors:  Nagayoshi Sakaya; Shinya Kaneko; Satoko Matsunaga; Mitsuhiro Itaya
Journal:  J Biochem       Date:  2006-03       Impact factor: 3.387

5.  Synthetic studies on gratisin. II.

Authors:  M Tamaki; M Takimoto; S Sofuku; I Muramatsu
Journal:  J Antibiot (Tokyo)       Date:  1983-06       Impact factor: 2.649

6.  Structure activity relationship studies on the antimicrobial activity of novel edeine A and D analogues.

Authors:  Zbigniew Czajgucki; Ryszard Andruszkiewicz; Wojciech Kamysz
Journal:  J Pept Sci       Date:  2006-10       Impact factor: 1.905

7.  Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology.

Authors:  Thomas D Otto; Mandy Sanders; Matthew Berriman; Chris Newbold
Journal:  Bioinformatics       Date:  2010-06-18       Impact factor: 6.937
  7 in total
  5 in total

1.  Draft Genome Sequence of Brevibacillus brevis DZQ7, a Plant Growth-Promoting Rhizobacterium with Broad-Spectrum Antimicrobial Activity.

Authors:  Qihui Hou; Chengqiang Wang; Xiaoyang Hou; Zhilin Xia; Jiangping Ye; Kai Liu; Hu Liu; Jun Wang; Haimeng Guo; Xiaoning Yu; Yanan Yang; Binghai Du; Yanqin Ding
Journal:  Genome Announc       Date:  2015-08-20

2.  Draft Genome Sequence of Brevibacillus panacihumi Strain W25, a Halotolerant Hydrocarbon-Degrading Bacterium.

Authors:  Xinxin Wang; Decai Jin; Lisha Zhou; Liang Wu; Wei An; Yu Chen; Lin Zhao
Journal:  Genome Announc       Date:  2014-01-23

3.  Culturing Simpler and Bacterial Wilt Suppressive Microbial Communities from Tomato Rhizosphere.

Authors:  Nazish Roy; Kihyuck Choi; Raees Khan; Seon-Woo Lee
Journal:  Plant Pathol J       Date:  2019-08-01       Impact factor: 1.795

4.  Simple and rapid direct cloning and heterologous expression of natural product biosynthetic gene cluster in Bacillus subtilis via Red/ET recombineering.

Authors:  Qingshu Liu; Qiyao Shen; Xiaoying Bian; Hanna Chen; Jun Fu; Hailong Wang; Ping Lei; Zhaohui Guo; Wu Chen; Dingjun Li; Youming Zhang
Journal:  Sci Rep       Date:  2016-09-30       Impact factor: 4.379

5.  Enhancement of edeine production in Brevibacillus brevis X23 via in situ promoter engineering.

Authors:  Qingshu Liu; Liang Zhang; Yunsheng Wang; Cuiyang Zhang; Tianbo Liu; Caichen Duan; Xiaoying Bian; Zhaohui Guo; Qingshan Long; Ying Tang; Jie Du; Aiyu Liu; Liangying Dai; Dingjun Li; Wu Chen
Journal:  Microb Biotechnol       Date:  2021-07-26       Impact factor: 5.813
  5 in total

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