Literature DB >> 23144374

Draft genome sequence of Pantoea sp. strain A4, a Rafflesia-associated bacterium that produces N-acylhomoserine lactones as quorum-sensing molecules.

Kar-Wai Hong1, Han Ming Gan, Siew-Moon Low, Patrick Kok Yuen Lee, Yee-Meng Chong, Wai-Fong Yin, Kok-Gan Chan.   

Abstract

Pantoea sp. strain A4 is a Gram-negative bacterium isolated from the Rafflesia flower. We present here, for the first time, the genome sequence of Rafflesia-associated Pantoea sp. strain A4, which exhibited quorum-sensing activity.

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Year:  2012        PMID： 23144374      PMCID： PMC3497480          DOI： 10.1128/JB.01619-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  Mitochondrial DNA sequences reveal the photosynthetic relatives of Rafflesia, the world's largest flower.

Authors:  Todd J Barkman; Seok-Hong Lim; Kamarudin Mat Salleh; Jamili Nais
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-08       Impact factor: 11.205

2.  Elucidating the evolutionary history of the Southeast Asian, holoparasitic, giant-flowered Rafflesiaceae: pliocene vicariance, morphological convergence and character displacement.

Authors:  Mika Bendiksby; Trond Schumacher; Galina Gussarova; Jamili Nais; Kamarudin Mat-Salleh; Nery Sofiyanti; Domingo Madulid; Stephen A Smith; Todd Barkman
Journal:  Mol Phylogenet Evol       Date:  2010-08-17       Impact factor: 4.286

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

4.  Cell aggregation is negatively regulated by N-acylhomoserine lactone-mediated quorum sensing in Pantoea ananatis SK-1.

Authors:  Tomohiro Morohoshi; Yuji Ogata; Tsukasa Ikeda
Journal:  J Biosci Bioeng       Date:  2011-09-06       Impact factor: 2.894

5.  The plant pathogen Pantoea ananatis produces N-acylhomoserine lactone and causes center rot disease of onion by quorum sensing.

Authors:  Tomohiro Morohoshi; Yuta Nakamura; Go Yamazaki; Akio Ishida; Norihiro Kato; Tsukasa Ikeda
Journal:  J Bacteriol       Date:  2007-09-07       Impact factor: 3.490

6.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

7.  A negative regulator mediates quorum-sensing control of exopolysaccharide production in Pantoea stewartii subsp. stewartii.

Authors:  S B von Bodman; D R Majerczak; D L Coplin
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

8.  GenBank.

Authors:  Dennis A Benson; Ilene Karsch-Mizrachi; Karen Clark; David J Lipman; James Ostell; Eric W Sayers
Journal:  Nucleic Acids Res       Date:  2011-12-05       Impact factor: 16.971

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  9 in total
  7 in total

1.  Analysis of Quorum-Sensing Pantoea stewartii Strain M073A through Whole-Genome Sequencing.

Authors:  Nur Izzati Mohamad; Wen-Si Tan; Chien-Yi Chang; Kok Keng Tee; Wai-Fong Yin; Kok-Gan Chan
Journal:  Genome Announc       Date:  2015-02-19

2.  Understanding the Quorum-Sensing Bacterium Pantoea stewartii Strain M009 with Whole-Genome Sequencing Analysis.

Authors:  Wen-Si Tan; Chien-Yi Chang; Wai-Fong Yin; Kok-Gan Chan
Journal:  Genome Announc       Date:  2015-01-29

3.  Whole-Genome Analysis of Aeromonas hydrophila Strain 187, Exhibiting Quorum-Sensing Activity.

Authors:  Xin-Yue Chan; Kek Heng Chua; Wai-Fong Yin; S D Puthucheary; Kok-Gan Chan
Journal:  Genome Announc       Date:  2014-12-24

4.  Whole-Genome Sequence and Fosfomycin Resistance of Bacillus sp. Strain G3(2015) Isolated from Seawater off the Coast of Malaysia.

Authors:  Xin-Yue Chan; Jian-Woon Chen; Tan-Guan-Sheng Adrian; Kar-Wai Hong; Chien-Yi Chang; Wai-Fong Yin; Kok-Gan Chan
Journal:  Genome Announc       Date:  2017-03-30

5.  Genome-Based Characterization of Biological Processes That Differentiate Closely Related Bacteria.

Authors:  Marike Palmer; Emma T Steenkamp; Martin P A Coetzee; Jochen Blom; Stephanus N Venter
Journal:  Front Microbiol       Date:  2018-02-06       Impact factor: 5.640

Review 6.  Beneficial Effect and Potential Risk of Pantoea on Rice Production.

Authors:  Luqiong Lv; Jinyan Luo; Temoor Ahmed; Haitham E M Zaki; Ye Tian; Muhammad Shafiq Shahid; Jianping Chen; Bin Li
Journal:  Plants (Basel)       Date:  2022-10-04

7.  N-acyl homoserine lactone-producing Pseudomonas putida strain T2-2 from human tongue surface.

Authors:  Jian-Woon Chen; Shenyang Chin; Kok Keng Tee; Wai-Fong Yin; Yeun Mun Choo; Kok-Gan Chan
Journal:  Sensors (Basel)       Date:  2013-09-30       Impact factor: 3.576
  7 in total

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