Literature DB >> 23144371

First genome sequence of a Burkholderia pseudomallei Isolate in China, strain BPC006, obtained from a melioidosis patient in Hainan.

Yao Fang1, Yong Huang, Qian Li, Hai Chen, Zhen Yao, Jin Pan, Jiang Gu, Bin Tang, Hai-guang Wang, Bo Yu, Yi-gang Tong, Quan-ming Zou, Xu-hu Mao.   

Abstract

Melioidosis, caused by Burkholderia pseudomallei, is considered to be endemic to Northern Australia and Southeast Asia, with high mortality and relapse rates, regardless of powerful antibiotic therapy. Here we report the first genome sequence of Burkholderia pseudomallei strain BPC006, obtained from a melioidosis patient in Hainan, China. The genome sizes of the 2 chromosomes were determined to be 4,001,777 bp and 3,153,284 bp.

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Year:  2012        PMID： 23144371      PMCID： PMC3497521          DOI： 10.1128/JB.01577-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  6 in total

1.  Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei.

Authors:  Matthew T G Holden; Richard W Titball; Sharon J Peacock; Ana M Cerdeño-Tárraga; Timothy Atkins; Lisa C Crossman; Tyrone Pitt; Carol Churcher; Karen Mungall; Stephen D Bentley; Mohammed Sebaihia; Nicholas R Thomson; Nathalie Bason; Ifor R Beacham; Karen Brooks; Katherine A Brown; Nat F Brown; Greg L Challis; Inna Cherevach; Tracy Chillingworth; Ann Cronin; Ben Crossett; Paul Davis; David DeShazer; Theresa Feltwell; Audrey Fraser; Zahra Hance; Heidi Hauser; Simon Holroyd; Kay Jagels; Karen E Keith; Mark Maddison; Sharon Moule; Claire Price; Michael A Quail; Ester Rabbinowitsch; Kim Rutherford; Mandy Sanders; Mark Simmonds; Sirirurg Songsivilai; Kim Stevens; Sarinna Tumapa; Monkgol Vesaratchavest; Sally Whitehead; Corin Yeats; Bart G Barrell; Petra C F Oyston; Julian Parkhill
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

2.  Prevalence of Burkholderia pseudomallei in Guangxi, China.

Authors:  G Ma; D Zheng; Q Cai; Z Yuan
Journal:  Epidemiol Infect       Date:  2009-06-19       Impact factor: 2.451

Review 3.  Melioidosis: insights into the pathogenicity of Burkholderia pseudomallei.

Authors:  W Joost Wiersinga; Tom van der Poll; Nicholas J White; Nicholas P Day; Sharon J Peacock
Journal:  Nat Rev Microbiol       Date:  2006-04       Impact factor: 60.633

4.  The global distribution of Burkholderia pseudomallei and melioidosis: an update.

Authors:  Bart J Currie; David A B Dance; Allen C Cheng
Journal:  Trans R Soc Trop Med Hyg       Date:  2008-12       Impact factor: 2.184

5.  xBASE, a collection of online databases for bacterial comparative genomics.

Authors:  Roy R Chaudhuri; Mark J Pallen
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

6.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  6 in total
  12 in total

1.  Crystallization and preliminary crystallographic studies of the hypothetical protein BPSL1038 from Burkholderia pseudomallei.

Authors:  Sofiyah Shaibullah; Nurhikmah Mohd-Sharif; Kok Lian Ho; Mohd Firdaus-Raih; Sheila Nathan; Rahmah Mohamed; Chyan Leong Ng
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-11-28       Impact factor: 1.056

2.  Burkholderia pseudomallei survival in lung epithelial cells benefits from miRNA-mediated suppression of ATG10.

Authors:  Qian Li; Yao Fang; Pan Zhu; Chun-Yan Ren; Hai Chen; Jiang Gu; Yin-Ping Jia; Kun Wang; Wen-de Tong; Wei-Jun Zhang; Jing Pan; Dong-Shui Lu; Bin Tang; Xu-Hu Mao
Journal:  Autophagy       Date:  2015       Impact factor: 16.016

3.  Burkholderia pseudomallei-derived miR-3473 enhances NF-κB via targeting TRAF3 and is associated with different inflammatory responses compared to Burkholderia thailandensis in murine macrophages.

Authors:  Yao Fang; Hai Chen; Yi Hu; Qian Li; Zhiqiang Hu; Tengfei Ma; Xuhu Mao
Journal:  BMC Microbiol       Date:  2016-11-28       Impact factor: 3.605

4.  Rab32 GTPase, as a direct target of miR-30b/c, controls the intracellular survival of Burkholderia pseudomallei by regulating phagosome maturation.

Authors:  Zhi-Qiang Hu; Cheng-Long Rao; Meng-Ling Tang; Yu Zhang; Xiao-Xue Lu; Jian-Gao Chen; Chan Mao; Ling Deng; Qian Li; Xu-Hu Mao
Journal:  PLoS Pathog       Date:  2019-06-14       Impact factor: 6.823

5.  Whole-Genome Sequence of Burkholderia pseudomallei Strain HNBP001, Isolated from a Melioidosis Patient in Hainan, China.

Authors:  Xun Kang; Zengzhen Fu; Mamy Jayne Nelly Rajaofera; Chenchu Li; Nan Zhang; Lin Liu; Qinghui Sun; Chuizhe Chen; Sufang Dong; Hao Xiu; Xiuyu Ou; Chengli Liu; Hua Pei; Na He; Qianfeng Xia
Journal:  Microbiol Resour Announc       Date:  2019-09-05

6.  Molecular epidemiology and antibiotic resistance of Burkholderia pseudomallei isolates from Hainan, China: A STROBE compliant observational study.

Authors:  Chenglong Rao; Zhiqiang Hu; Jiangao Chen; Mengling Tang; Hai Chen; Xiaoxue Lu; Liusu Cao; Ling Deng; Xuhu Mao; Qian Li
Journal:  Medicine (Baltimore)       Date:  2019-03       Impact factor: 1.889

7.  Tauroursodeoxycholic acid prevents Burkholderia pseudomallei-induced endoplasmic reticulum stress and is protective during melioidosis in mice.

Authors:  Siqi Yuan; Yao Fang; Mengling Tang; Zhiqiang Hu; Chenglong Rao; Jiangao Chen; Yupei Xia; Meijuan Zhang; Jingmin Yan; Bin Tang; Xiaoyi He; Jianping Xie; Xuhu Mao; Qian Li
Journal:  BMC Microbiol       Date:  2021-05-04       Impact factor: 3.605

8.  Evaluation of the Bruker Biotyper Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry System for Identification of Clinical and Environmental Isolates of Burkholderia pseudomallei.

Authors:  He Wang; Ya-Lei Chen; Shih-Hua Teng; Zhi-Peng Xu; Ying-Chun Xu; Po-Ren Hsueh
Journal:  Front Microbiol       Date:  2016-04-08       Impact factor: 5.640

9.  Reliable detection of Burkholderia pseudomallei using multiple cross displacement amplification label-based biosensor.

Authors:  Xiaoxia Wang; Licheng Wang; Huaxiong Zhu; Chongzhen Wang; Xiong Zhu
Journal:  BMC Microbiol       Date:  2022-03-10       Impact factor: 3.605

10.  Burkholderia pseudomallei interferes with host lipid metabolism via NR1D2-mediated PNPLA2/ATGL suppression to block autophagy-dependent inhibition of infection.

Authors:  Mengling Tang; Zhiqiang Hu; Chenglong Rao; Jiangao Chen; Siqi Yuan; Jiangang Zhang; Chan Mao; Jingmin Yan; Yupei Xia; Meijuan Zhang; Juanjuan Yue; Yang Xiang; Jianping Xie; Xuhu Mao; Qian Li
Journal:  Autophagy       Date:  2020-08-11       Impact factor: 16.016
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