Literature DB >> 23144218

Arabidopsis ribosomal proteins control developmental programs through translational regulation of auxin response factors.

Abel Rosado1, Ruixi Li, Wilhelmina van de Ven, Emily Hsu, Natasha V Raikhel.   

Abstract

Upstream ORFs are elements found in the 5'-leader sequences of specific mRNAs that modulate the translation of downstream ORFs encoding major gene products. In Arabidopsis, the translational control of auxin response factors (ARFs) by upstream ORFs has been proposed as a regulatory mechanism required to respond properly to complex auxin-signaling inputs. In this study, we identify and characterize the aberrant auxin responses in specific ribosomal protein mutants in which multiple ARF transcription factors are simultaneously repressed at the translational level. This characteristic lends itself to the use of these mutants as genetic tools to bypass the genetic redundancy among members of the ARF family in Arabidopsis. Using this approach, we were able to assign unique functions for ARF2, ARF3, and ARF6 in plant development.

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Year:  2012        PMID: 23144218      PMCID: PMC3511758          DOI: 10.1073/pnas.1214774109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  83 in total

1.  Auxin inhibits endocytosis and promotes its own efflux from cells.

Authors:  Tomasz Paciorek; Eva Zazímalová; Nadia Ruthardt; Jan Petrásek; York-Dieter Stierhof; Jürgen Kleine-Vehn; David A Morris; Neil Emans; Gerd Jürgens; Niko Geldner; Jirí Friml
Journal:  Nature       Date:  2005-06-30       Impact factor: 49.962

Review 2.  Dynamic integration of auxin transport and signalling.

Authors:  Ottoline Leyser
Journal:  Curr Biol       Date:  2006-06-06       Impact factor: 10.834

3.  Asymmetric leaves1 mediates leaf patterning and stem cell function in Arabidopsis.

Authors:  M E Byrne; R Barley; M Curtis; J M Arroyo; M Dunham; A Hudson; R A Martienssen
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

4.  Physical evidence for distinct mechanisms of translational control by upstream open reading frames.

Authors:  A Gaba; Z Wang; T Krishnamoorthy; A G Hinnebusch; M S Sachs
Journal:  EMBO J       Date:  2001-11-15       Impact factor: 11.598

5.  The shoot meristem identity gene TFL1 is involved in flower development and trafficking to the protein storage vacuole.

Authors:  Eun Ju Sohn; Marcela Rojas-Pierce; Songqin Pan; Clay Carter; Antonio Serrano-Mislata; Francisco Madueño; Enrique Rojo; Marci Surpin; Natasha V Raikhel
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-14       Impact factor: 11.205

6.  DORNROSCHEN is a direct target of the auxin response factor MONOPTEROS in the Arabidopsis embryo.

Authors:  Melanie Cole; John Chandler; Dolf Weijers; Bianca Jacobs; Petra Comelli; Wolfgang Werr
Journal:  Development       Date:  2009-04-15       Impact factor: 6.868

7.  Three PIGGYBACK genes that specifically influence leaf patterning encode ribosomal proteins.

Authors:  Violaine Pinon; J Peter Etchells; Pascale Rossignol; Sarah A Collier; Juana M Arroyo; Robert A Martienssen; Mary E Byrne
Journal:  Development       Date:  2008-02-27       Impact factor: 6.868

8.  The auxin signalling network translates dynamic input into robust patterning at the shoot apex.

Authors:  Teva Vernoux; Géraldine Brunoud; Etienne Farcot; Valérie Morin; Hilde Van den Daele; Jonathan Legrand; Marina Oliva; Pradeep Das; Antoine Larrieu; Darren Wells; Yann Guédon; Lynne Armitage; Franck Picard; Soazig Guyomarc'h; Coralie Cellier; Geraint Parry; Rachil Koumproglou; John H Doonan; Mark Estelle; Christophe Godin; Stefan Kepinski; Malcolm Bennett; Lieven De Veylder; Jan Traas
Journal:  Mol Syst Biol       Date:  2011-07-05       Impact factor: 11.429

9.  Roles of PIN-FORMED1 and MONOPTEROS in pattern formation of the apical region of the Arabidopsis embryo.

Authors:  Mitsuhiro Aida; Teva Vernoux; Masahiko Furutani; Jan Traas; Masao Tasaka
Journal:  Development       Date:  2002-09       Impact factor: 6.868

10.  Conserved upstream open reading frames in higher plants.

Authors:  Michael K Tran; Carolyn J Schultz; Ute Baumann
Journal:  BMC Genomics       Date:  2008-07-31       Impact factor: 3.969

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  44 in total

1.  Translational landscape of photomorphogenic Arabidopsis.

Authors:  Ming-Jung Liu; Szu-Hsien Wu; Jing-Fen Wu; Wen-Dar Lin; Yi-Chen Wu; Tsung-Ying Tsai; Huang-Lung Tsai; Shu-Hsing Wu
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

2.  Mechanism of cytoplasmic mRNA translation.

Authors:  Karen S Browning; Julia Bailey-Serres
Journal:  Arabidopsis Book       Date:  2015-04-24

3.  Arabidopsis ribosomal proteins control vacuole trafficking and developmental programs through the regulation of lipid metabolism.

Authors:  Ruixi Li; Ruobai Sun; Glenn R Hicks; Natasha V Raikhel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-22       Impact factor: 11.205

4.  GTPase ROP2 binds and promotes activation of target of rapamycin, TOR, in response to auxin.

Authors:  Mikhail Schepetilnikov; Joelle Makarian; Ola Srour; Angèle Geldreich; Zhenbiao Yang; Johana Chicher; Philippe Hammann; Lyubov A Ryabova
Journal:  EMBO J       Date:  2017-02-28       Impact factor: 11.598

5.  Auxin perception: in the IAA of the beholder.

Authors:  Bastiaan O R Bargmann; Mark Estelle
Journal:  Physiol Plant       Date:  2014-05       Impact factor: 4.500

6.  SMALL AUXIN UP RNA62/75 Are Required for the Translation of Transcripts Essential for Pollen Tube Growth.

Authors:  Siou-Luan He; Hsu-Liang Hsieh; Guang-Yuh Jauh
Journal:  Plant Physiol       Date:  2018-08-09       Impact factor: 8.340

7.  Balance between Cytosolic and Chloroplast Translation Affects Leaf Variegation.

Authors:  Ruijuan Wang; Jun Zhao; Min Jia; Ni Xu; Shuang Liang; Jingxia Shao; Yafei Qi; Xiayan Liu; Lijun An; Fei Yu
Journal:  Plant Physiol       Date:  2017-11-15       Impact factor: 8.340

8.  Ribosome biogenesis factor OLI2 and its interactor BRX1-2 are associated with morphogenesis and lifespan extension in Arabidopsis thaliana.

Authors:  Shugo Maekawa; Shuichi Yanagisawa
Journal:  Plant Biotechnol (Tokyo)       Date:  2021-03-25       Impact factor: 1.133

9.  Genome-Wide Mapping of Uncapped and Cleaved Transcripts Reveals a Role for the Nuclear mRNA Cap-Binding Complex in Cotranslational RNA Decay in Arabidopsis.

Authors:  Xiang Yu; Matthew R Willmann; Stephen J Anderson; Brian D Gregory
Journal:  Plant Cell       Date:  2016-10-07       Impact factor: 11.277

10.  Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis.

Authors:  Piyada Juntawong; Thomas Girke; Jérémie Bazin; Julia Bailey-Serres
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-23       Impact factor: 11.205

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