Literature DB >> 23143255

Crystallization of uridine phosphorylase from Shewanella oneidensis MR-1 in the laboratory and under microgravity and preliminary X-ray diffraction analysis.

Tatyana N Safonova1, Nadezhda N Mordkovich, Konstantin M Polyakov, Valentin A Manuvera, Vladimir P Veiko, Vladimir O Popov.   

Abstract

Uridine phosphorylase (UDP, EC 2.4.2.3), a key enzyme in the pyrimidine salvage pathway, catalyses the reversible phosphorolysis of uridine to uracil and ribose 1-phosphate. The gene expression of UDP from Shewanella oneidensis MR-1 was performed in the recipient strain Escherichia coli. The UDP protein was crystallized on earth (in the free form and in complex with uridine as the substrate) by the hanging-drop vapour-diffusion method at 296 K and under microgravity conditions (in the free form) aboard the Russian Segment of the International Space Station by the capillary counter-diffusion method. The data sets were collected to a resolution of 1.9 Å from crystals of the free form grown on earth, 1.6 Å from crystals of the complex with uridine and 0.95 Å from crystals of the free form grown under microgravity. All crystals belong to the space group P2(1) and have similar unit-cell parameters. The crystal of uridine phosphorylase grown under microgravity diffracted to ultra-high resolution and gave high-quality X-ray diffraction data.

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Year:  2012        PMID: 23143255      PMCID: PMC3515387          DOI: 10.1107/S1744309112041784

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

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  2 in total

1.  Physicochemical characterization of uridine phosphorylase from Shewanella oneidensis MR-1.

Authors:  N N Mordkovich; T N Safonova; V A Manuvera; V P Veiko; K M Polyakov; K S Alekseev; S N Mikhailov; V O Popov
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2.  Identification of the ligand in the structure of the protein with unknown function STM4435 from Salmonella typhimurium.

Authors:  K M Boyko; M A Gorbacheva; T V Rakitina; D A Korzhenevsky; P V Dorovatovsky; A V Lipkin; V O Popov
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  2 in total

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