Literature DB >> 23143251

Crystallization and X-ray diffraction studies of crustacean proliferating cell nuclear antigen.

Jesus S Carrasco-Miranda1, Cesar S Cardona-Felix, Alonso A Lopez-Zavala, Enrique de-la-Re-Vega, Eugenio De la Mora, Enrique Rudiño-Piñera, Rogerio R Sotelo-Mundo, Luis G Brieba.   

Abstract

Proliferating cell nuclear antigen (PCNA), a member of the sliding clamp family of proteins, interacts specifically with DNA replication and repair proteins through a small peptide motif called the PCNA-interacting protein or PIP box. PCNA is recognized as one of the key proteins involved in DNA metabolism. In the present study, the recombinant PCNA from Litopenaeus vannamei (LvPCNA) was heterologously overexpressed and purified using metal ion-affinity chromatography. Crystals suitable for diffraction grew overnight using the hanging-drop vapour-diffusion method. LvPCNA crystals belong to space group C2 with unit-cell parameters a=144.6, b=83.4, c=74.3 Å, β=117.6°. One data set was processed to 3 Å resolution, with an overall Rmeas of 0.09 and a completeness of 93.3%. Initial phases were obtained by molecular replacement using a homology model of LvPCNA as the search model. Refinement and structural analysis are underway. This report is the first successful crystallographic analysis of a marine crustacean decapod shrimp (L. vannamei) proliferating cell nuclear antigen.

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Year:  2012        PMID: 23143251      PMCID: PMC3515383          DOI: 10.1107/S1744309112040444

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  26 in total

Review 1.  PCNA, the maestro of the replication fork.

Authors:  George-Lucian Moldovan; Boris Pfander; Stefan Jentsch
Journal:  Cell       Date:  2007-05-18       Impact factor: 41.582

2.  Architecture of the DNA polymerase B-proliferating cell nuclear antigen (PCNA)-DNA ternary complex.

Authors:  Kouta Mayanagi; Shinichi Kiyonari; Hirokazu Nishida; Mihoko Saito; Daisuke Kohda; Yoshizumi Ishino; Tsuyoshi Shirai; Kosuke Morikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-18       Impact factor: 11.205

3.  Identification, mRNA expression and characterization of proliferating cell nuclear antigen gene from Chinese mitten crab Eriocheir japonica sinensis.

Authors:  Peng Li; Jie Zha; Yi Kong; Ce Chen; Hongying Sun; Daxiang Song; Kaiya Zhou
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2010-06-10       Impact factor: 2.320

4.  Molecular cloning and characterization of proliferating cell nuclear antigen (PCNA) from Chinese shrimp Fenneropenaeus chinensis.

Authors:  Yusu Xie; Bing Wang; Fuhua Li; Hao Jiang; Jianhai Xiang
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2008-07-16       Impact factor: 2.231

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Crystal structures of the Arabidopsis thaliana proliferating cell nuclear antigen 1 and 2 proteins complexed with the human p21 C-terminal segment.

Authors:  Wojciech Strzalka; Takuji Oyama; Kazuo Tori; Kosuke Morikawa
Journal:  Protein Sci       Date:  2009-05       Impact factor: 6.725

7.  Cyclin/PCNA is the auxiliary protein of DNA polymerase-delta.

Authors:  R Bravo; R Frank; P A Blundell; H Macdonald-Bravo
Journal:  Nature       Date:  1987 Apr 2-8       Impact factor: 49.962

8.  Identification of a novel, widespread, and functionally important PCNA-binding motif.

Authors:  Karin M Gilljam; Emadoldin Feyzi; Per A Aas; Mirta M L Sousa; Rebekka Müller; Cathrine B Vågbø; Tara C Catterall; Nina B Liabakk; Geir Slupphaug; Finn Drabløs; Hans E Krokan; Marit Otterlei
Journal:  J Cell Biol       Date:  2009-09-07       Impact factor: 10.539

9.  Proliferating cell nuclear antigen loaded onto double-stranded DNA: dynamics, minor groove interactions and functional implications.

Authors:  Ivaylo Ivanov; Brian R Chapados; J Andrew McCammon; John A Tainer
Journal:  Nucleic Acids Res       Date:  2006-10-27       Impact factor: 16.971

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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