Literature DB >> 23139194

Novel activity-based probes for broad-spectrum profiling of retaining β-exoglucosidases in situ and in vivo.

Wouter W Kallemeijn1, Kah-Yee Li, Martin D Witte, André R A Marques, Jan Aten, Saskia Scheij, Jianbing Jiang, Lianne I Willems, Tineke M Voorn-Brouwer, Cindy P A A van Roomen, Roelof Ottenhoff, Rolf G Boot, Hans van den Elst, Marthe T C Walvoort, Bogdan I Florea, Jeroen D C Codée, Gijsbert A van der Marel, Johannes M F G Aerts, Herman S Overkleeft.   

Abstract

A high-end label: Cyclophellitol aziridine-type activity-based probes allow for ultra-sensitive visualization of mammalian β-glucosidases (GBA1, GBA2, GBA3, and LPH) as well as several non-mammalian β-glucosidases (see picture). These probes offer new ways to study β-exoglucosidases, and configurational isomers of the cyclophellitol aziridine core may give activity-based probes targeting other retaining glycosidase families.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID： 23139194     DOI： 10.1002/anie.201207771

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


  36 in total

Review 1.  Current and Novel Aspects on the Non-lysosomal β-Glucosylceramidase GBA2.

Authors:  Aureli Massimo; Samarani Maura; Loberto Nicoletta; Mancini Giulia; Murdica Valentina; Chiricozzi Elena; Prinetti Alessandro; Bassi Rosaria; Sonnino Sandro
Journal:  Neurochem Res       Date:  2015-11-24       Impact factor: 3.996

2.  Relative quantification of proteasome activity by activity-based protein profiling and LC-MS/MS.

Authors:  Nan Li; Chi-Lin Kuo; Guillem Paniagua; Hans van den Elst; Martijn Verdoes; Lianne I Willems; Wouter A van der Linden; Mark Ruben; Eric van Genderen; Jacob Gubbens; Gilles P van Wezel; Herman S Overkleeft; Bogdan I Florea
Journal:  Nat Protoc       Date:  2013-05-23       Impact factor: 13.491

3.  Broad-range glycosidase activity profiling.

Authors:  Balakumaran Chandrasekar; Thomas Colby; Asif Emran Khan Emon; Jianbing Jiang; Tram Ngoc Hong; Joji Grace Villamor; Anne Harzen; Herman S Overkleeft; Renier A L van der Hoorn
Journal:  Mol Cell Proteomics       Date:  2014-07-23       Impact factor: 5.911

4.  Organelle-specific activity-based protein profiling in living cells.

Authors:  Susan D Wiedner; Lindsey N Anderson; Natalie C Sadler; William B Chrisler; Vamsi K Kodali; Richard D Smith; Aaron T Wright
Journal:  Angew Chem Int Ed Engl       Date:  2014-02-06       Impact factor: 15.336

5.  A sensitive gel-based method combining distinct cyclophellitol-based probes for the identification of acid/base residues in human retaining β-glucosidases.

Authors:  Wouter W Kallemeijn; Martin D Witte; Tineke M Voorn-Brouwer; Marthe T C Walvoort; Kah-Yee Li; Jeroen D C Codée; Gijsbert A van der Marel; Rolf G Boot; Herman S Overkleeft; Johannes M F G Aerts
Journal:  J Biol Chem       Date:  2014-10-24       Impact factor: 5.157

6.  β-Glucosidase 2 (GBA2) activity and imino sugar pharmacology.

Authors:  Christina M Ridley; Karen E Thur; Jessica Shanahan; Nagendra Babu Thillaiappan; Ann Shen; Karly Uhl; Charlotte M Walden; Ahad A Rahim; Simon N Waddington; Frances M Platt; Aarnoud C van der Spoel
Journal:  J Biol Chem       Date:  2013-07-23       Impact factor: 5.157

7.  Activity-based probes for functional interrogation of retaining β-glucuronidases.

Authors:  Liang Wu; Jianbing Jiang; Yi Jin; Wouter W Kallemeijn; Chi-Lin Kuo; Marta Artola; Wei Dai; Cas van Elk; Marco van Eijk; Gijsbert A van der Marel; Jeroen D C Codée; Bogdan I Florea; Johannes M F G Aerts; Herman S Overkleeft; Gideon J Davies
Journal:  Nat Chem Biol       Date:  2017-06-05       Impact factor: 15.040

8.  Distinguishing the differences in β-glycosylceramidase folds, dynamics, and actions informs therapeutic uses.

Authors:  Fredj Ben Bdira; Marta Artola; Herman S Overkleeft; Marcellus Ubbink; Johannes M F G Aerts
Journal:  J Lipid Res       Date:  2018-10-02       Impact factor: 5.922

9.  Multiplex Fluorescent, Activity-Based Protein Profiling Identifies Active α-Glycosidases and Other Hydrolases in Plants.

Authors:  Amjad M Husaini; Kyoko Morimoto; Balakumaran Chandrasekar; Steven Kelly; Farnusch Kaschani; Daniel Palmero; Jianbing Jiang; Markus Kaiser; Oussama Ahrazem; Hermen S Overkleeft; Renier A L van der Hoorn
Journal:  Plant Physiol       Date:  2018-03-19       Impact factor: 8.340

10.  Role of β-glucosidase 2 in aberrant glycosphingolipid metabolism: model of glucocerebrosidase deficiency in zebrafish.

Authors:  Lindsey T Lelieveld; Mina Mirzaian; Chi-Lin Kuo; Marta Artola; Maria J Ferraz; Remco E A Peter; Hisako Akiyama; Peter Greimel; Richard J B H N van den Berg; Herman S Overkleeft; Rolf G Boot; Annemarie H Meijer; Johannes M F G Aerts
Journal:  J Lipid Res       Date:  2019-09-27       Impact factor: 5.922
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