Literature DB >> 23132114

ORCAE: online resource for community annotation of eukaryotes.

Lieven Sterck, Kenny Billiau, Thomas Abeel, Pierre Rouzé, Yves Van de Peer.   

Abstract

Mesh：

Year:  2012        PMID： 23132114     DOI： 10.1038/nmeth.2242

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  5 in total

1.  Community-based gene structure annotation.

Authors:  Shannon D Schlueter; Matthew D Wilkerson; Eva Huala; Seung Y Rhee; Volker Brendel
Journal:  Trends Plant Sci       Date:  2005-01       Impact factor: 18.313

2.  yrGATE: a web-based gene-structure annotation tool for the identification and dissemination of eukaryotic genes.

Authors:  Matthew D Wilkerson; Shannon D Schlueter; Volker Brendel
Journal:  Genome Biol       Date:  2006       Impact factor: 13.583

3.  Genomic information infrastructure after the deluge.

Authors:  Julian Parkhill; Ewan Birney; Paul Kersey
Journal:  Genome Biol       Date:  2010-07-26       Impact factor: 13.583

4.  Chado controller: advanced annotation management with a community annotation system.

Authors:  Valentin Guignon; Gaëtan Droc; Michael Alaux; Franc-Christophe Baurens; Olivier Garsmeur; Claire Poiron; Tim Carver; Mathieu Rouard; Stéphanie Bocs
Journal:  Bioinformatics       Date:  2012-01-28       Impact factor: 6.937

5.  Genome re-annotation: a wiki solution?

Authors:  Steven L Salzberg
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583
  5 in total
  72 in total

1.  Long-Term Population Studies Uncover the Genome Structure and Genetic Basis of Xenobiotic and Host Plant Adaptation in the Herbivore Tetranychus urticae.

Authors:  Nicky Wybouw; Olivia Kosterlitz; Andre H Kurlovs; Sabina Bajda; Robert Greenhalgh; Simon Snoeck; Huyen Bui; Astrid Bryon; Wannes Dermauw; Thomas Van Leeuwen; Richard M Clark
Journal:  Genetics       Date:  2019-02-11       Impact factor: 4.562

Review 2.  Insights into conifer giga-genomes.

Authors:  Amanda R De La Torre; Inanc Birol; Jean Bousquet; Pär K Ingvarsson; Stefan Jansson; Steven J M Jones; Christopher I Keeling; John MacKay; Ove Nilsson; Kermit Ritland; Nathaniel Street; Alvin Yanchuk; Philipp Zerbe; Jörg Bohlmann
Journal:  Plant Physiol       Date:  2014-10-27       Impact factor: 8.340

3.  MicroRNA156: a potential graft-transmissible microRNA that modulates plant architecture and tuberization in Solanum tuberosum ssp. andigena.

Authors:  Sneha Bhogale; Ameya S Mahajan; Bhavani Natarajan; Mohit Rajabhoj; Hirekodathakallu V Thulasiram; Anjan K Banerjee
Journal:  Plant Physiol       Date:  2013-12-18       Impact factor: 8.340

4.  Photo-enzymatic repair of UVB-induced DNA damage in the two-spotted spider mite Tetranychus urticae.

Authors:  Yasumasa Murata; Masahiro Osakabe
Journal:  Exp Appl Acarol       Date:  2016-11-21       Impact factor: 2.132

5.  Anaerobic peroxisomes in Mastigamoeba balamuthi.

Authors:  Tien Le; Vojtěch Žárský; Eva Nývltová; Petr Rada; Karel Harant; Marie Vancová; Zdeněk Verner; Ivan Hrdý; Jan Tachezy
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-13       Impact factor: 11.205

6.  Deciphering evolutionary strata on plant sex chromosomes and fungal mating-type chromosomes through compositional segmentation.

Authors:  Ravi S Pandey; Rajeev K Azad
Journal:  Plant Mol Biol       Date:  2015-12-22       Impact factor: 4.076

7.  A Magnesium Transport Protein Related to Mammalian SLC41 and Bacterial MgtE Contributes to Circadian Timekeeping in a Unicellular Green Alga.

Authors:  Helen K Feord; Frederick E G Dear; Darren J Obbard; Gerben van Ooijen
Journal:  Genes (Basel)       Date:  2019-02-19       Impact factor: 4.096

8.  Evidence for the plasticity of arthropod signal transduction pathways.

Authors:  Ryan M Pace; P Cole Eskridge; Miodrag Grbić; Lisa M Nagy
Journal:  Dev Genes Evol       Date:  2014-09-12       Impact factor: 0.900

9.  Structure/function analysis of a type iii polyketide synthase in the brown alga Ectocarpus siliculosus reveals a biochemical pathway in phlorotannin monomer biosynthesis.

Authors:  Laurence Meslet-Cladière; Ludovic Delage; Cédric J-J Leroux; Sophie Goulitquer; Catherine Leblanc; Emeline Creis; Erwan Ar Gall; Valérie Stiger-Pouvreau; Mirjam Czjzek; Philippe Potin
Journal:  Plant Cell       Date:  2013-08-27       Impact factor: 11.277

10.  Disruption of a horizontally transferred phytoene desaturase abolishes carotenoid accumulation and diapause in Tetranychus urticae.

Authors:  Astrid Bryon; Andre H Kurlovs; Wannes Dermauw; Robert Greenhalgh; Maria Riga; Miodrag Grbić; Luc Tirry; Masahiro Osakabe; John Vontas; Richard M Clark; Thomas Van Leeuwen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-03       Impact factor: 11.205
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