Literature DB >> 23130836

Blood chromatin as a biosensor of the epigenetic milieu: a tool for studies in living psychiatric patients.

Rajiv P Sharma1.   

Abstract

This article constructs an argument for using blood chromatin (contained in nucleated blood cells) as a protein biosensor to integrate the ambient epigenetic influences in the internal milieu. An analogy is made to blood glycated hemoglobin (HbA1c) in diabetes as an integrated proxy for glucose levels and body-wide protein glycation. Genome-wide chromatin can serve as an organizing principle that bridges the central and peripheral compartments by entraining commensurable gene networks. Chromatin deposition along these networks will be imposed by the totality of epigenetic influences, which incorporates significant contributions from biochemicals that readily traverse the blood-brain barrier. In a clinical trial, these influences would be dominated by pharmaceuticals designed to override pathophysiological signals. In practice, mRNA readouts would be limited to nonsynaptic gene networks whose critical nodes are occupied by a site-specific chromatin modification. Finally, chromatin measurements in peripheral tissue will retain the influences of a patient's lifestyle and unique genomic background.

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Year:  2012        PMID: 23130836      PMCID: PMC3556639          DOI: 10.2217/epi.12.46

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  57 in total

1.  Reduced baseline acetylated histone 3 levels, and a blunted response to HDAC inhibition in lymphocyte cultures from schizophrenia subjects.

Authors:  David P Gavin; Saritha Kartan; Kayla Chase; Dennis R Grayson; Rajiv P Sharma
Journal:  Schizophr Res       Date:  2008-06-09       Impact factor: 4.939

2.  Transcriptome alterations in the prefrontal cortex of subjects with schizophrenia who committed suicide.

Authors:  Krassimira Garbett; Rodica Gal-Chis; Gabor Gaszner; David A Lewis; Károly Mirnics
Journal:  Neuropsychopharmacol Hung       Date:  2008-03

3.  Combinatorial patterns of histone acetylations and methylations in the human genome.

Authors:  Zhibin Wang; Chongzhi Zang; Jeffrey A Rosenfeld; Dustin E Schones; Artem Barski; Suresh Cuddapah; Kairong Cui; Tae-Young Roh; Weiqun Peng; Michael Q Zhang; Keji Zhao
Journal:  Nat Genet       Date:  2008-06-15       Impact factor: 38.330

4.  Brain chromatin remodeling: a novel mechanism of alcoholism.

Authors:  Subhash C Pandey; Rajesh Ugale; Huaibo Zhang; Lei Tang; Anand Prakash
Journal:  J Neurosci       Date:  2008-04-02       Impact factor: 6.167

5.  Histone deacetylase inhibitors and candidate gene expression: An in vivo and in vitro approach to studying chromatin remodeling in a clinical population.

Authors:  David P Gavin; Saritha Kartan; Kayla Chase; Sundararajan Jayaraman; Rajiv P Sharma
Journal:  J Psychiatr Res       Date:  2009-02-01       Impact factor: 4.791

Review 6.  Basic and clinical aspects of non-neuronal acetylcholine: expression of an independent, non-neuronal cholinergic system in lymphocytes and its clinical significance in immunotherapy.

Authors:  Takeshi Fujii; Yuki Takada-Takatori; Koichiro Kawashima
Journal:  J Pharmacol Sci       Date:  2008-02-16       Impact factor: 3.337

7.  Molecular evidence for increased expression of genes related to immune and chaperone function in the prefrontal cortex in schizophrenia.

Authors:  Dominique Arion; Travis Unger; David A Lewis; Pat Levitt; Károly Mirnics
Journal:  Biol Psychiatry       Date:  2007-06-13       Impact factor: 13.382

8.  Characterization of the action of antipsychotic subtypes on valproate-induced chromatin remodeling.

Authors:  Alessandro Guidotti; Erbo Dong; Marija Kundakovic; Rosalba Satta; Dennis R Grayson; Erminio Costa
Journal:  Trends Pharmacol Sci       Date:  2008-12-26       Impact factor: 14.819

9.  Dopamine receptors in human lymphocytes: radioligand binding and quantitative RT-PCR assays.

Authors:  Galina P Kirillova; Rebecca J Hrutkay; Michael R Shurin; Galina V Shurin; Irina L Tourkova; Michael M Vanyukov
Journal:  J Neurosci Methods       Date:  2008-08-05       Impact factor: 2.390

10.  Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells.

Authors:  Bo Wen; Hao Wu; Yoichi Shinkai; Rafael A Irizarry; Andrew P Feinberg
Journal:  Nat Genet       Date:  2009-01-18       Impact factor: 38.330

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  9 in total

Review 1.  Molecular insights into transgenerational non-genetic inheritance of acquired behaviours.

Authors:  Johannes Bohacek; Isabelle M Mansuy
Journal:  Nat Rev Genet       Date:  2015-09-29       Impact factor: 53.242

2.  Histone H3 phosphorylation is upregulated in PBMCs of schizophrenia patients in comparison to healthy controls.

Authors:  Rajiv P Sharma; Benjamin Feiner; Kayla A Chase
Journal:  Schizophr Res       Date:  2015-10-23       Impact factor: 4.939

Review 3.  Understanding epigenetic architecture of suicide neurobiology: A critical perspective.

Authors:  Bhaskar Roy; Yogesh Dwivedi
Journal:  Neurosci Biobehav Rev       Date:  2016-11-09       Impact factor: 8.989

Review 4.  Gene-environment interactions in Alzheimer disease: the emerging role of epigenetics.

Authors:  Lucia Migliore; Fabio Coppedè
Journal:  Nat Rev Neurol       Date:  2022-09-30       Impact factor: 44.711

5.  Histone methylation at H3K9: evidence for a restrictive epigenome in schizophrenia.

Authors:  Kayla A Chase; David P Gavin; Alessandro Guidotti; Rajiv P Sharma
Journal:  Schizophr Res       Date:  2013-06-28       Impact factor: 4.939

6.  Exon resequencing of H3K9 methyltransferase complex genes, EHMT1, EHTM2 and WIZ, in Japanese autism subjects.

Authors:  Shabeesh Balan; Yoshimi Iwayama; Motoko Maekawa; Tomoko Toyota; Tetsuo Ohnishi; Manabu Toyoshima; Chie Shimamoto; Kayoko Esaki; Kazuo Yamada; Yasuhide Iwata; Katsuaki Suzuki; Masayuki Ide; Motonori Ota; Satoshi Fukuchi; Masatsugu Tsujii; Norio Mori; Yoichi Shinkai; Takeo Yoshikawa
Journal:  Mol Autism       Date:  2014-10-06       Impact factor: 7.509

7.  The Relationship between DNA Methylation and Antidepressant Medications: A Systematic Review.

Authors:  Lauren M Webb; Kathryn E Phillips; Man Choi Ho; Marin Veldic; Caren J Blacker
Journal:  Int J Mol Sci       Date:  2020-01-28       Impact factor: 5.923

Review 8.  DNA Methylation and Type 2 Diabetes: Novel Biomarkers for Risk Assessment?

Authors:  Gregory Alexander Raciti; Antonella Desiderio; Michele Longo; Alessia Leone; Federica Zatterale; Immacolata Prevenzano; Claudia Miele; Raffaele Napoli; Francesco Beguinot
Journal:  Int J Mol Sci       Date:  2021-10-28       Impact factor: 5.923

9.  Association of NGF and Mitochondrial Respiration with Autism Spectrum Disorder.

Authors:  Maria Gevezova; Danail Minchev; Iliana Pacheva; Tatyana Todorova; Ralitsa Yordanova; Elena Timova; Ivan Ivanov; Victoria Sarafian
Journal:  Int J Mol Sci       Date:  2022-10-07       Impact factor: 6.208

  9 in total

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