Literature DB >> 23130093

The Zero-truncated Poisson with Right Censoring: an Application to Translational Breast Cancer Research.

Hung-Wen Yeh1, Byron Gajewski, Purna Mukhopadhyay, Fariba Behbod.   

Abstract

We propose to analyze positive count data with right censoring from Behbod et al. (2009) using the censored zero-truncated Poisson model (CZTP). The comparison in truncated means across subgroups in each cell line is carried out through a log-linear model that links the un-truncated Poisson parameter and regression covariates. We also perform simulation to evaluate the performance of the CZTP model in finite and large sample sizes. In general, the CZTP model provides accurate and precise estimates. However, for data with small means and small sample sizes, it may be more proper to make inference based on the mean counts rather than on the regression coefficients. For small sample sizes and moderate means, the likelihood ratio test is more reliable than the Wald test. We also demonstrate how power analysis can be used to justify and/or guide the choice of censoring thresholds in study design. A SAS macro is provided in Appendix for readers' reference.

Entities:  

Year:  2012        PMID: 23130093      PMCID: PMC3487170          DOI: 10.1080/19466315.2011.636279

Source DB:  PubMed          Journal:  Stat Biopharm Res        ISSN: 1946-6315            Impact factor:   1.452


  9 in total

1.  Modeling household fertility decisions: estimation and testing of censored regression models for count data.

Authors:  S B Caudill; F G Mixon
Journal:  Empir Econ       Date:  1995

2.  Generation of a functional mammary gland from a single stem cell.

Authors:  Mark Shackleton; François Vaillant; Kaylene J Simpson; John Stingl; Gordon K Smyth; Marie-Liesse Asselin-Labat; Li Wu; Geoffrey J Lindeman; Jane E Visvader
Journal:  Nature       Date:  2006-01-05       Impact factor: 49.962

3.  Point and interval estimation of the population size using a zero-truncated negative binomial regression model.

Authors:  Maarten J L F Cruyff; Peter G M van der Heijden
Journal:  Biom J       Date:  2008-12       Impact factor: 2.207

4.  An application of the truncated Poisson distribution to immunogold assay.

Authors:  J N Matthews; D R Appleton
Journal:  Biometrics       Date:  1993-06       Impact factor: 2.571

5.  A truncated poisson regression model with applications to occurrence of adenomatous polyps.

Authors:  T Xie; M Aickin
Journal:  Stat Med       Date:  1997-08-30       Impact factor: 2.373

6.  Ductal carcinoma in situ and the emergence of diversity during breast cancer evolution.

Authors:  D Craig Allred; Yun Wu; Sufeng Mao; Iris D Nagtegaal; Sangjun Lee; Charles M Perou; Syed K Mohsin; Peter O'Connell; Anna Tsimelzon; Dan Medina
Journal:  Clin Cancer Res       Date:  2008-01-15       Impact factor: 12.531

7.  Truncated negative binomial mixed regression modelling of ischaemic stroke hospitalizations.

Authors:  Andy H Lee; K Wang; Kelvin K W Yau; Peter J Somerford
Journal:  Stat Med       Date:  2003-04-15       Impact factor: 2.373

Review 8.  Current treatment and clinical trial developments for ductal carcinoma in situ of the breast.

Authors:  Judy C Boughey; Ricardo J Gonzalez; Everett Bonner; Henry M Kuerer
Journal:  Oncologist       Date:  2007-11

9.  An intraductal human-in-mouse transplantation model mimics the subtypes of ductal carcinoma in situ.

Authors:  Fariba Behbod; Frances S Kittrell; Heather LaMarca; David Edwards; Sofia Kerbawy; Jessica C Heestand; Evelin Young; Purna Mukhopadhyay; Hung-Wen Yeh; D Craig Allred; Min Hu; Kornelia Polyak; Jeffrey M Rosen; Daniel Medina
Journal:  Breast Cancer Res       Date:  2009       Impact factor: 6.466

  9 in total
  1 in total

1.  A Bayesian model for censored positive count data in evaluating breast cancer progression.

Authors:  Hung-Wen Yeh; Yu Jiang; Lili Garrard; Yang Lei; Byron Gajewski
Journal:  Model Assist Stat Appl       Date:  2013
  1 in total

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