| Literature DB >> 23125816 |
Hoong-Kun Fun1, Tze Shyang Chia, Shobhitha Shetty, Balakrishna Kalluraya.
Abstract
In the title compound, C(22)H(19)N(5)OS·H(2)O, the naphthalene ring system and the benzene ring [dihedral angle = 85.19 (8)°] make dihedral angles of 87.02 (9) and 14.41 (10)°, respectively, with the pyrazole ring. The mean plane through the 2-methyl-enehydrazinecarbothio-amide group [C-N-N-C(=S)-N; maximum deviation = 0.022 (1) Å] is slightly twisted from the pyrazole ring [dihedral angle = 5.60 (11)°]. In the crystal, mol-ecules are linked by N-H⋯S, N-H⋯O, O-H⋯S, O-H⋯N and C-H⋯S hydrogen bonds into sheets parallel to the ab plane. π-π inter-actions are also observed [centroid-to-centroid distances = 3.7778 (12) and 3.7010 (12) Å].Entities:
Year: 2012 PMID: 23125816 PMCID: PMC3470403 DOI: 10.1107/S1600536812039815
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C22H19N5OS·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 5898 reflections | |
| θ = 2.7–29.9° | |
| µ = 0.19 mm−1 | |
| α = 113.481 (1)° | |
| β = 90.942 (1)° | Block, yellow |
| γ = 107.359 (1)° | 0.41 × 0.22 × 0.17 mm |
| Bruker SMART APEXII CCD diffractometer | 4542 independent reflections |
| Radiation source: fine-focus sealed tube | 3499 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 27.5°, θmin = 1.7° |
| Absorption correction: multi-scan ( | |
| 15860 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4542 reflections | (Δ/σ)max < 0.001 |
| 292 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.33 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.57687 (7) | 0.72177 (5) | 0.01468 (4) | 0.02486 (14) | |
| O1 | −0.19366 (17) | 0.59419 (13) | 0.21670 (11) | 0.0213 (3) | |
| O1W | 0.3788 (2) | 1.05291 (17) | 0.10581 (15) | 0.0346 (4) | |
| N1 | −0.3199 (2) | 0.39469 (16) | 0.25166 (13) | 0.0191 (3) | |
| N2 | −0.2933 (2) | 0.27084 (16) | 0.23124 (14) | 0.0206 (3) | |
| N3 | 0.1454 (2) | 0.55365 (17) | 0.11750 (14) | 0.0232 (4) | |
| N4 | 0.3012 (2) | 0.57326 (18) | 0.07115 (14) | 0.0233 (4) | |
| N5 | 0.3021 (2) | 0.79095 (19) | 0.10655 (15) | 0.0248 (4) | |
| C1 | 0.0100 (2) | 0.7186 (2) | 0.39444 (16) | 0.0198 (4) | |
| H1A | −0.0239 | 0.6386 | 0.4094 | 0.024* | |
| C2 | 0.1399 (2) | 0.84368 (19) | 0.47281 (16) | 0.0197 (4) | |
| C3 | 0.2230 (3) | 0.8533 (2) | 0.57417 (16) | 0.0216 (4) | |
| H3A | 0.1904 | 0.7752 | 0.5916 | 0.026* | |
| C4 | 0.3494 (3) | 0.9740 (2) | 0.64713 (17) | 0.0245 (4) | |
| H4A | 0.4040 | 0.9788 | 0.7147 | 0.029* | |
| C5 | 0.3998 (3) | 1.0916 (2) | 0.62329 (17) | 0.0237 (4) | |
| H5A | 0.4885 | 1.1748 | 0.6744 | 0.028* | |
| C6 | 0.3209 (3) | 1.0856 (2) | 0.52650 (17) | 0.0226 (4) | |
| H6A | 0.3550 | 1.1652 | 0.5111 | 0.027* | |
| C7 | 0.1886 (2) | 0.96195 (19) | 0.44872 (16) | 0.0192 (4) | |
| C8 | 0.1020 (3) | 0.9522 (2) | 0.34795 (16) | 0.0220 (4) | |
| H8A | 0.1321 | 1.0312 | 0.3317 | 0.026* | |
| C9 | −0.0238 (3) | 0.8314 (2) | 0.27380 (16) | 0.0217 (4) | |
| H9A | −0.0822 | 0.8266 | 0.2074 | 0.026* | |
| C10 | −0.0654 (2) | 0.71408 (19) | 0.29778 (16) | 0.0193 (4) | |
| C11 | −0.5279 (3) | 0.5262 (2) | 0.30213 (16) | 0.0229 (4) | |
| H11A | −0.4700 | 0.5811 | 0.2646 | 0.027* | |
| C12 | −0.6720 (3) | 0.5495 (2) | 0.35584 (17) | 0.0248 (4) | |
| H12A | −0.7104 | 0.6229 | 0.3569 | 0.030* | |
| C13 | −0.7608 (3) | 0.4676 (2) | 0.40784 (17) | 0.0258 (4) | |
| H13A | −0.8606 | 0.4835 | 0.4431 | 0.031* | |
| C14 | −0.7026 (3) | 0.3621 (2) | 0.40795 (17) | 0.0252 (4) | |
| H14A | −0.7634 | 0.3053 | 0.4432 | 0.030* | |
| C15 | −0.5566 (3) | 0.3391 (2) | 0.35700 (16) | 0.0222 (4) | |
| H15A | −0.5162 | 0.2675 | 0.3582 | 0.027* | |
| C16 | −0.4695 (2) | 0.42118 (19) | 0.30412 (16) | 0.0190 (4) | |
| C17 | −0.1488 (2) | 0.2736 (2) | 0.18121 (16) | 0.0203 (4) | |
| C18 | −0.0785 (2) | 0.3980 (2) | 0.16783 (16) | 0.0205 (4) | |
| C19 | −0.1928 (2) | 0.47093 (19) | 0.21273 (16) | 0.0191 (4) | |
| C20 | 0.0800 (3) | 0.4335 (2) | 0.11819 (16) | 0.0223 (4) | |
| H20A | 0.1373 | 0.3665 | 0.0853 | 0.027* | |
| C21 | 0.3835 (3) | 0.6963 (2) | 0.06758 (15) | 0.0196 (4) | |
| C22 | −0.0798 (3) | 0.1541 (2) | 0.14558 (18) | 0.0269 (4) | |
| H22A | −0.1585 | 0.0808 | 0.1632 | 0.040* | |
| H22B | 0.0410 | 0.1853 | 0.1863 | 0.040* | |
| H22C | −0.0768 | 0.1180 | 0.0639 | 0.040* | |
| H1N4 | 0.353 (3) | 0.504 (3) | 0.044 (2) | 0.039 (7)* | |
| H2N5 | 0.346 (4) | 0.872 (3) | 0.103 (2) | 0.049 (8)* | |
| H1N5 | 0.206 (3) | 0.770 (3) | 0.137 (2) | 0.039 (7)* | |
| H2W1 | 0.367 (4) | 1.077 (3) | 0.045 (3) | 0.066 (10)* | |
| H1W1 | 0.478 (4) | 1.114 (4) | 0.152 (3) | 0.071 (10)* |
| S1 | 0.0260 (3) | 0.0226 (3) | 0.0313 (3) | 0.0092 (2) | 0.0110 (2) | 0.0157 (2) |
| O1 | 0.0210 (7) | 0.0147 (7) | 0.0275 (7) | 0.0045 (5) | 0.0013 (5) | 0.0095 (6) |
| O1W | 0.0398 (9) | 0.0229 (8) | 0.0378 (9) | 0.0026 (7) | −0.0007 (8) | 0.0156 (7) |
| N1 | 0.0204 (8) | 0.0158 (8) | 0.0233 (8) | 0.0078 (6) | 0.0040 (6) | 0.0092 (7) |
| N2 | 0.0230 (8) | 0.0155 (8) | 0.0258 (8) | 0.0080 (7) | 0.0042 (7) | 0.0098 (7) |
| N3 | 0.0234 (8) | 0.0221 (9) | 0.0245 (8) | 0.0069 (7) | 0.0065 (7) | 0.0106 (7) |
| N4 | 0.0250 (9) | 0.0214 (9) | 0.0271 (9) | 0.0100 (7) | 0.0104 (7) | 0.0118 (7) |
| N5 | 0.0272 (9) | 0.0199 (9) | 0.0307 (9) | 0.0092 (7) | 0.0101 (8) | 0.0129 (8) |
| C1 | 0.0203 (9) | 0.0176 (9) | 0.0258 (10) | 0.0082 (8) | 0.0084 (8) | 0.0118 (8) |
| C2 | 0.0197 (9) | 0.0185 (9) | 0.0243 (10) | 0.0097 (8) | 0.0081 (7) | 0.0098 (8) |
| C3 | 0.0245 (10) | 0.0190 (10) | 0.0261 (10) | 0.0102 (8) | 0.0071 (8) | 0.0119 (8) |
| C4 | 0.0255 (10) | 0.0247 (11) | 0.0240 (10) | 0.0104 (8) | 0.0040 (8) | 0.0097 (9) |
| C5 | 0.0229 (10) | 0.0193 (10) | 0.0267 (10) | 0.0064 (8) | 0.0040 (8) | 0.0079 (8) |
| C6 | 0.0243 (10) | 0.0165 (9) | 0.0295 (10) | 0.0085 (8) | 0.0091 (8) | 0.0108 (8) |
| C7 | 0.0201 (9) | 0.0183 (9) | 0.0227 (9) | 0.0097 (7) | 0.0087 (7) | 0.0095 (8) |
| C8 | 0.0261 (10) | 0.0181 (9) | 0.0269 (10) | 0.0099 (8) | 0.0091 (8) | 0.0124 (8) |
| C9 | 0.0243 (10) | 0.0208 (10) | 0.0235 (10) | 0.0091 (8) | 0.0064 (8) | 0.0117 (8) |
| C10 | 0.0157 (9) | 0.0167 (9) | 0.0255 (10) | 0.0058 (7) | 0.0061 (7) | 0.0084 (8) |
| C11 | 0.0243 (10) | 0.0219 (10) | 0.0253 (10) | 0.0095 (8) | 0.0052 (8) | 0.0115 (8) |
| C12 | 0.0256 (10) | 0.0225 (10) | 0.0302 (11) | 0.0125 (8) | 0.0046 (8) | 0.0116 (9) |
| C13 | 0.0230 (10) | 0.0276 (11) | 0.0288 (11) | 0.0111 (9) | 0.0083 (8) | 0.0119 (9) |
| C14 | 0.0247 (10) | 0.0219 (10) | 0.0292 (11) | 0.0060 (8) | 0.0073 (8) | 0.0122 (9) |
| C15 | 0.0234 (10) | 0.0184 (10) | 0.0257 (10) | 0.0076 (8) | 0.0033 (8) | 0.0098 (8) |
| C16 | 0.0177 (9) | 0.0178 (9) | 0.0202 (9) | 0.0064 (7) | 0.0029 (7) | 0.0063 (8) |
| C17 | 0.0210 (9) | 0.0167 (9) | 0.0212 (9) | 0.0055 (7) | 0.0012 (7) | 0.0068 (8) |
| C18 | 0.0218 (9) | 0.0177 (9) | 0.0226 (9) | 0.0061 (8) | 0.0037 (7) | 0.0094 (8) |
| C19 | 0.0190 (9) | 0.0152 (9) | 0.0220 (9) | 0.0033 (7) | 0.0014 (7) | 0.0086 (8) |
| C20 | 0.0237 (10) | 0.0199 (10) | 0.0257 (10) | 0.0091 (8) | 0.0053 (8) | 0.0106 (8) |
| C21 | 0.0251 (10) | 0.0169 (9) | 0.0168 (9) | 0.0065 (8) | 0.0016 (7) | 0.0077 (8) |
| C22 | 0.0270 (10) | 0.0210 (10) | 0.0348 (11) | 0.0108 (8) | 0.0083 (9) | 0.0116 (9) |
| S1—C21 | 1.6859 (19) | C6—C7 | 1.421 (3) |
| O1—C19 | 1.357 (2) | C6—H6A | 0.9500 |
| O1—C10 | 1.403 (2) | C7—C8 | 1.422 (3) |
| O1W—H2W1 | 0.94 (3) | C8—C9 | 1.369 (3) |
| O1W—H1W1 | 0.88 (3) | C8—H8A | 0.9500 |
| N1—C19 | 1.359 (2) | C9—C10 | 1.410 (3) |
| N1—N2 | 1.380 (2) | C9—H9A | 0.9500 |
| N1—C16 | 1.428 (2) | C11—C12 | 1.388 (3) |
| N2—C17 | 1.327 (2) | C11—C16 | 1.391 (3) |
| N3—C20 | 1.289 (2) | C11—H11A | 0.9500 |
| N3—N4 | 1.383 (2) | C12—C13 | 1.384 (3) |
| N4—C21 | 1.352 (2) | C12—H12A | 0.9500 |
| N4—H1N4 | 0.93 (3) | C13—C14 | 1.386 (3) |
| N5—C21 | 1.335 (3) | C13—H13A | 0.9500 |
| N5—H2N5 | 0.89 (3) | C14—C15 | 1.385 (3) |
| N5—H1N5 | 0.88 (3) | C14—H14A | 0.9500 |
| C1—C10 | 1.362 (3) | C15—C16 | 1.390 (3) |
| C1—C2 | 1.423 (3) | C15—H15A | 0.9500 |
| C1—H1A | 0.9500 | C17—C18 | 1.414 (3) |
| C2—C3 | 1.417 (3) | C17—C22 | 1.497 (3) |
| C2—C7 | 1.420 (3) | C18—C19 | 1.381 (3) |
| C3—C4 | 1.366 (3) | C18—C20 | 1.446 (3) |
| C3—H3A | 0.9500 | C20—H20A | 0.9500 |
| C4—C5 | 1.411 (3) | C22—H22A | 0.9800 |
| C4—H4A | 0.9500 | C22—H22B | 0.9800 |
| C5—C6 | 1.368 (3) | C22—H22C | 0.9800 |
| C5—H5A | 0.9500 | ||
| C19—O1—C10 | 116.98 (14) | C1—C10—C9 | 122.20 (18) |
| H2W1—O1W—H1W1 | 107 (3) | O1—C10—C9 | 115.16 (16) |
| C19—N1—N2 | 110.16 (15) | C12—C11—C16 | 118.91 (18) |
| C19—N1—C16 | 131.06 (16) | C12—C11—H11A | 120.5 |
| N2—N1—C16 | 118.75 (15) | C16—C11—H11A | 120.5 |
| C17—N2—N1 | 105.70 (15) | C13—C12—C11 | 121.09 (19) |
| C20—N3—N4 | 114.56 (16) | C13—C12—H12A | 119.5 |
| C21—N4—N3 | 119.81 (16) | C11—C12—H12A | 119.5 |
| C21—N4—H1N4 | 118.9 (16) | C12—C13—C14 | 119.39 (18) |
| N3—N4—H1N4 | 121.3 (16) | C12—C13—H13A | 120.3 |
| C21—N5—H2N5 | 120.8 (18) | C14—C13—H13A | 120.3 |
| C21—N5—H1N5 | 117.0 (17) | C15—C14—C13 | 120.44 (19) |
| H2N5—N5—H1N5 | 122 (2) | C15—C14—H14A | 119.8 |
| C10—C1—C2 | 119.59 (17) | C13—C14—H14A | 119.8 |
| C10—C1—H1A | 120.2 | C14—C15—C16 | 119.67 (18) |
| C2—C1—H1A | 120.2 | C14—C15—H15A | 120.2 |
| C3—C2—C7 | 119.00 (17) | C16—C15—H15A | 120.2 |
| C3—C2—C1 | 121.73 (17) | C15—C16—C11 | 120.46 (17) |
| C7—C2—C1 | 119.27 (17) | C15—C16—N1 | 118.54 (17) |
| C4—C3—C2 | 120.58 (18) | C11—C16—N1 | 121.00 (17) |
| C4—C3—H3A | 119.7 | N2—C17—C18 | 111.53 (16) |
| C2—C3—H3A | 119.7 | N2—C17—C22 | 120.73 (17) |
| C3—C4—C5 | 120.78 (19) | C18—C17—C22 | 127.74 (17) |
| C3—C4—H4A | 119.6 | C19—C18—C17 | 104.38 (16) |
| C5—C4—H4A | 119.6 | C19—C18—C20 | 130.63 (18) |
| C6—C5—C4 | 119.91 (19) | C17—C18—C20 | 124.98 (17) |
| C6—C5—H5A | 120.0 | O1—C19—N1 | 122.18 (16) |
| C4—C5—H5A | 120.0 | O1—C19—C18 | 129.54 (17) |
| C5—C6—C7 | 120.90 (18) | N1—C19—C18 | 108.22 (16) |
| C5—C6—H6A | 119.6 | N3—C20—C18 | 121.63 (18) |
| C7—C6—H6A | 119.6 | N3—C20—H20A | 119.2 |
| C2—C7—C6 | 118.82 (17) | C18—C20—H20A | 119.2 |
| C2—C7—C8 | 118.63 (17) | N5—C21—N4 | 116.22 (17) |
| C6—C7—C8 | 122.55 (17) | N5—C21—S1 | 123.99 (15) |
| C9—C8—C7 | 121.42 (18) | N4—C21—S1 | 119.79 (14) |
| C9—C8—H8A | 119.3 | C17—C22—H22A | 109.5 |
| C7—C8—H8A | 119.3 | C17—C22—H22B | 109.5 |
| C8—C9—C10 | 118.83 (18) | H22A—C22—H22B | 109.5 |
| C8—C9—H9A | 120.6 | C17—C22—H22C | 109.5 |
| C10—C9—H9A | 120.6 | H22A—C22—H22C | 109.5 |
| C1—C10—O1 | 122.62 (17) | H22B—C22—H22C | 109.5 |
| C19—N1—N2—C17 | 0.7 (2) | C14—C15—C16—C11 | 0.0 (3) |
| C16—N1—N2—C17 | 179.09 (16) | C14—C15—C16—N1 | −179.64 (17) |
| C20—N3—N4—C21 | −178.93 (17) | C12—C11—C16—C15 | 1.4 (3) |
| C10—C1—C2—C3 | −179.63 (17) | C12—C11—C16—N1 | −178.98 (17) |
| C10—C1—C2—C7 | 0.0 (3) | C19—N1—C16—C15 | −166.70 (19) |
| C7—C2—C3—C4 | −0.7 (3) | N2—N1—C16—C15 | 15.3 (2) |
| C1—C2—C3—C4 | 178.93 (18) | C19—N1—C16—C11 | 13.6 (3) |
| C2—C3—C4—C5 | 0.1 (3) | N2—N1—C16—C11 | −164.33 (17) |
| C3—C4—C5—C6 | 0.4 (3) | N1—N2—C17—C18 | −0.1 (2) |
| C4—C5—C6—C7 | −0.3 (3) | N1—N2—C17—C22 | −179.62 (17) |
| C3—C2—C7—C6 | 0.8 (3) | N2—C17—C18—C19 | −0.6 (2) |
| C1—C2—C7—C6 | −178.83 (16) | C22—C17—C18—C19 | 178.93 (19) |
| C3—C2—C7—C8 | −178.74 (16) | N2—C17—C18—C20 | 178.86 (17) |
| C1—C2—C7—C8 | 1.6 (3) | C22—C17—C18—C20 | −1.6 (3) |
| C5—C6—C7—C2 | −0.3 (3) | C10—O1—C19—N1 | 106.6 (2) |
| C5—C6—C7—C8 | 179.23 (18) | C10—O1—C19—C18 | −76.5 (2) |
| C2—C7—C8—C9 | −1.1 (3) | N2—N1—C19—O1 | 176.39 (16) |
| C6—C7—C8—C9 | 179.36 (18) | C16—N1—C19—O1 | −1.7 (3) |
| C7—C8—C9—C10 | −1.0 (3) | N2—N1—C19—C18 | −1.1 (2) |
| C2—C1—C10—O1 | 179.76 (16) | C16—N1—C19—C18 | −179.22 (18) |
| C2—C1—C10—C9 | −2.2 (3) | C17—C18—C19—O1 | −176.24 (18) |
| C19—O1—C10—C1 | −24.8 (2) | C20—C18—C19—O1 | 4.3 (3) |
| C19—O1—C10—C9 | 157.06 (16) | C17—C18—C19—N1 | 1.0 (2) |
| C8—C9—C10—C1 | 2.8 (3) | C20—C18—C19—N1 | −178.40 (19) |
| C8—C9—C10—O1 | −179.09 (16) | N4—N3—C20—C18 | 177.44 (17) |
| C16—C11—C12—C13 | −2.0 (3) | C19—C18—C20—N3 | 5.4 (3) |
| C11—C12—C13—C14 | 1.2 (3) | C17—C18—C20—N3 | −173.91 (19) |
| C12—C13—C14—C15 | 0.3 (3) | N3—N4—C21—N5 | −2.4 (3) |
| C13—C14—C15—C16 | −0.9 (3) | N3—N4—C21—S1 | 178.15 (13) |
| H··· | ||||
| N4—H1 | 0.93 (3) | 2.56 (3) | 3.466 (2) | 165 (3) |
| N5—H2 | 0.89 (3) | 1.94 (3) | 2.805 (3) | 164 (3) |
| O1 | 0.94 (4) | 2.58 (4) | 3.397 (2) | 145 (3) |
| O1 | 0.89 (4) | 2.01 (4) | 2.876 (3) | 167 (4) |
| C20—H20 | 0.95 | 2.87 | 3.741 (2) | 153 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N4—H1N4⋯S1i | 0.93 (3) | 2.56 (3) | 3.466 (2) | 165 (3) |
| N5—H2N5⋯O1 | 0.89 (3) | 1.94 (3) | 2.805 (3) | 164 (3) |
| O1 | 0.94 (4) | 2.58 (4) | 3.397 (2) | 145 (3) |
| O1 | 0.89 (4) | 2.01 (4) | 2.876 (3) | 167 (4) |
| C20—H20 | 0.95 | 2.87 | 3.741 (2) | 153 |
Symmetry codes: (i) ; (ii) ; (iii) .