Literature DB >> 23125804

1-Benzyl-piperidin-4-one O-(2-bromo-benz-yl)oxime.

Rodolfo Moreno-Fuquen1, Alix E Loaiza, John Diaz-Velandia, Alan R Kennedy, Catriona A Morrison.   

Abstract

In the title mol-ecule, C(19)H(21)BrN(2)O, the piperidone ring adopts a chair conformation with a total puckering amplitude Q(T) of 0.554 (2) Å. The dihedral angle between the benzene rings is 64.10 (7)°. There are no significant inter-molecular inter-actions.

Entities:  

Year:  2012        PMID: 23125804      PMCID: PMC3470391          DOI: 10.1107/S1600536812040263

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the use of the oxime function in organic synthesis, see: Mikhaleva et al. (2006 ▶). For properties of the oxime function, see: Parthiban et al. (2011 ▶); Jayabharathi et al. (2011 ▶); Picard et al. (2000 ▶); For related structures, see: Parthiban et al. (2009 ▶); For details of ring-puckering conformational analysis, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C19H21BrN2O M = 373.29 Monoclinic, a = 21.1586 (5) Å b = 5.6731 (2) Å c = 14.6425 (4) Å β = 103.037 (3)° V = 1712.31 (9) Å3 Z = 4 Mo Kα radiation μ = 2.41 mm−1 T = 123 K 0.40 × 0.12 × 0.05 mm

Data collection

Oxford Diffraction Xcalibur E diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.448, T max = 1.000 9090 measured reflections 4525 independent reflections 3556 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.078 S = 1.03 4525 reflections 208 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.69 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SIR92 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812040263/gg2101sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812040263/gg2101Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812040263/gg2101Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H21BrN2OF(000) = 768
Mr = 373.29Dx = 1.448 Mg m3
Monoclinic, P21/cMelting point: 341(1) K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 21.1586 (5) ÅCell parameters from 4022 reflections
b = 5.6731 (2) Åθ = 3.2–30.0°
c = 14.6425 (4) ŵ = 2.41 mm1
β = 103.037 (3)°T = 123 K
V = 1712.31 (9) Å3Cut from large needle, colourless
Z = 40.40 × 0.12 × 0.05 mm
Oxford Diffraction Xcalibur E diffractometer4525 independent reflections
Radiation source: fine-focus sealed tube3556 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
ω scansθmax = 30.0°, θmin = 3.2°
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)h = −29→28
Tmin = 0.448, Tmax = 1.000k = −7→7
9090 measured reflectionsl = −20→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.078H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0294P)2 + 0.3261P] where P = (Fo2 + 2Fc2)/3
4525 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.69 e Å3
Experimental. Absorption correction: CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.34.40 (release 27-08-2010 CrysAlis171 .NET) (compiled Aug 27 2010,11:50:40) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.089592 (10)0.38045 (4)0.610086 (15)0.02227 (8)
O10.19320 (7)0.9868 (3)0.78376 (10)0.0186 (3)
N10.25028 (8)0.8872 (3)0.84339 (13)0.0182 (4)
N20.31211 (8)1.2442 (3)1.08828 (12)0.0178 (4)
C10.15948 (10)0.8022 (4)0.72769 (15)0.0185 (5)
H1A0.19120.70230.70520.022*
H1B0.12990.87160.67210.022*
C20.12070 (9)0.6498 (4)0.77892 (14)0.0141 (4)
C30.08859 (9)0.4501 (4)0.73724 (14)0.0155 (4)
C40.05440 (10)0.3014 (4)0.78332 (16)0.0200 (5)
H40.03380.16450.75310.024*
C50.05072 (10)0.3551 (4)0.87379 (16)0.0223 (5)
H50.02780.25380.90670.027*
C60.08033 (10)0.5564 (4)0.91680 (15)0.0212 (5)
H60.07690.59500.97860.025*
C70.11498 (10)0.7015 (4)0.86974 (15)0.0183 (5)
H70.13530.83890.90000.022*
C80.27666 (10)1.0359 (4)0.90613 (15)0.0164 (4)
C90.25232 (10)1.2752 (4)0.92308 (15)0.0202 (5)
H9A0.20851.29900.88270.024*
H9B0.28151.39680.90680.024*
C100.24949 (10)1.3006 (4)1.02568 (15)0.0214 (5)
H10A0.23721.46431.03750.026*
H10B0.21581.19391.03930.026*
C110.32969 (10)0.9998 (4)1.07409 (15)0.0188 (5)
H11A0.29570.89341.08710.023*
H11B0.37100.96101.11870.023*
C120.33726 (10)0.9598 (4)0.97427 (15)0.0188 (5)
H12A0.37471.05120.96340.023*
H12B0.34550.79070.96490.023*
C130.30752 (11)1.2827 (5)1.18558 (15)0.0246 (5)
H13A0.27781.16391.20240.030*
H13B0.28861.44031.19070.030*
C140.37229 (10)1.2669 (4)1.25436 (15)0.0198 (5)
C150.38856 (11)1.0734 (4)1.31350 (15)0.0222 (5)
H150.35880.94671.31020.027*
C160.44798 (12)1.0645 (4)1.37719 (16)0.0258 (5)
H160.45870.93161.41710.031*
C170.49166 (11)1.2485 (5)1.38284 (16)0.0263 (5)
H170.53211.24331.42720.032*
C180.47616 (11)1.4401 (4)1.32351 (17)0.0249 (5)
H180.50621.56581.32630.030*
C190.41685 (11)1.4481 (4)1.26022 (16)0.0229 (5)
H190.40651.58051.21990.027*
U11U22U33U12U13U23
Br10.02297 (11)0.02514 (14)0.01779 (12)−0.00154 (10)0.00266 (8)−0.00613 (10)
O10.0158 (7)0.0169 (8)0.0189 (8)−0.0016 (6)−0.0045 (6)0.0019 (7)
N10.0136 (8)0.0198 (10)0.0194 (9)0.0013 (7)−0.0002 (7)0.0026 (8)
N20.0140 (8)0.0219 (10)0.0160 (9)0.0038 (7)0.0006 (7)−0.0017 (8)
C10.0175 (10)0.0189 (11)0.0169 (11)−0.0036 (9)−0.0011 (8)−0.0009 (9)
C20.0122 (9)0.0140 (11)0.0142 (10)0.0022 (8)−0.0013 (7)0.0010 (9)
C30.0129 (9)0.0176 (11)0.0143 (10)0.0025 (8)−0.0006 (8)−0.0020 (9)
C40.0155 (10)0.0183 (11)0.0242 (12)0.0008 (9)0.0005 (9)0.0012 (10)
C50.0188 (10)0.0258 (13)0.0219 (11)−0.0007 (9)0.0033 (9)0.0071 (10)
C60.0207 (11)0.0283 (13)0.0139 (10)0.0031 (9)0.0025 (8)0.0033 (10)
C70.0159 (10)0.0199 (11)0.0167 (11)0.0003 (9)−0.0015 (8)−0.0018 (9)
C80.0147 (10)0.0184 (11)0.0159 (10)−0.0007 (8)0.0029 (8)0.0007 (9)
C90.0203 (10)0.0186 (12)0.0183 (11)0.0012 (9)−0.0027 (9)−0.0008 (10)
C100.0158 (10)0.0253 (12)0.0215 (11)0.0039 (9)0.0008 (9)−0.0029 (10)
C110.0160 (10)0.0214 (12)0.0175 (11)0.0010 (9)0.0006 (8)0.0001 (10)
C120.0139 (10)0.0209 (12)0.0199 (11)0.0030 (9)0.0004 (8)−0.0018 (10)
C130.0197 (11)0.0363 (14)0.0179 (11)0.0038 (10)0.0046 (9)−0.0026 (11)
C140.0184 (10)0.0271 (13)0.0144 (10)0.0033 (9)0.0050 (8)−0.0037 (10)
C150.0264 (11)0.0232 (13)0.0176 (11)−0.0035 (9)0.0060 (9)−0.0023 (10)
C160.0311 (13)0.0288 (14)0.0179 (11)0.0036 (10)0.0059 (10)0.0048 (10)
C170.0211 (11)0.0360 (15)0.0199 (12)0.0007 (10)0.0010 (9)−0.0027 (12)
C180.0242 (12)0.0246 (13)0.0258 (13)−0.0055 (10)0.0054 (10)−0.0013 (11)
C190.0241 (11)0.0227 (12)0.0223 (12)0.0039 (9)0.0059 (9)0.0038 (10)
Br1—C31.908 (2)C9—H9A0.9900
O1—C11.420 (2)C9—H9B0.9900
O1—N11.437 (2)C10—H10A0.9900
N1—C81.279 (3)C10—H10B0.9900
N2—C111.462 (3)C11—C121.523 (3)
N2—C131.466 (3)C11—H11A0.9900
N2—C101.466 (2)C11—H11B0.9900
C1—C21.504 (3)C12—H12A0.9900
C1—H1A0.9900C12—H12B0.9900
C1—H1B0.9900C13—C141.509 (3)
C2—C31.389 (3)C13—H13A0.9900
C2—C71.393 (3)C13—H13B0.9900
C3—C41.382 (3)C14—C191.384 (3)
C4—C51.379 (3)C14—C151.392 (3)
C4—H40.9500C15—C161.387 (3)
C5—C61.384 (3)C15—H150.9500
C5—H50.9500C16—C171.384 (3)
C6—C71.385 (3)C16—H160.9500
C6—H60.9500C17—C181.384 (3)
C7—H70.9500C17—H170.9500
C8—C91.492 (3)C18—C191.382 (3)
C8—C121.500 (3)C18—H180.9500
C9—C101.524 (3)C19—H190.9500
C1—O1—N1107.75 (15)C9—C10—H10A109.3
C8—N1—O1110.33 (17)N2—C10—H10B109.3
C11—N2—C13110.74 (18)C9—C10—H10B109.3
C11—N2—C10109.94 (17)H10A—C10—H10B108.0
C13—N2—C10109.04 (17)N2—C11—C12111.28 (18)
O1—C1—C2113.28 (18)N2—C11—H11A109.4
O1—C1—H1A108.9C12—C11—H11A109.4
C2—C1—H1A108.9N2—C11—H11B109.4
O1—C1—H1B108.9C12—C11—H11B109.4
C2—C1—H1B108.9H11A—C11—H11B108.0
H1A—C1—H1B107.7C8—C12—C11109.66 (18)
C3—C2—C7116.8 (2)C8—C12—H12A109.7
C3—C2—C1121.16 (19)C11—C12—H12A109.7
C7—C2—C1121.99 (19)C8—C12—H12B109.7
C4—C3—C2122.8 (2)C11—C12—H12B109.7
C4—C3—Br1118.18 (16)H12A—C12—H12B108.2
C2—C3—Br1119.04 (16)N2—C13—C14112.97 (18)
C5—C4—C3118.9 (2)N2—C13—H13A109.0
C5—C4—H4120.5C14—C13—H13A109.0
C3—C4—H4120.5N2—C13—H13B109.0
C4—C5—C6120.1 (2)C14—C13—H13B109.0
C4—C5—H5119.9H13A—C13—H13B107.8
C6—C5—H5119.9C19—C14—C15118.5 (2)
C5—C6—C7120.0 (2)C19—C14—C13120.0 (2)
C5—C6—H6120.0C15—C14—C13121.4 (2)
C7—C6—H6120.0C16—C15—C14120.4 (2)
C6—C7—C2121.3 (2)C16—C15—H15119.8
C6—C7—H7119.4C14—C15—H15119.8
C2—C7—H7119.4C17—C16—C15120.3 (2)
N1—C8—C9127.48 (19)C17—C16—H16119.9
N1—C8—C12117.18 (19)C15—C16—H16119.9
C9—C8—C12115.27 (18)C18—C17—C16119.6 (2)
C8—C9—C10109.98 (18)C18—C17—H17120.2
C8—C9—H9A109.7C16—C17—H17120.2
C10—C9—H9A109.7C19—C18—C17119.8 (2)
C8—C9—H9B109.7C19—C18—H18120.1
C10—C9—H9B109.7C17—C18—H18120.1
H9A—C9—H9B108.2C18—C19—C14121.3 (2)
N2—C10—C9111.39 (18)C18—C19—H19119.3
N2—C10—H10A109.3C14—C19—H19119.3
C1—O1—N1—C8−169.11 (18)C13—N2—C10—C9177.2 (2)
N1—O1—C1—C278.7 (2)C8—C9—C10—N253.8 (3)
O1—C1—C2—C3−175.08 (17)C13—N2—C11—C12−177.74 (17)
O1—C1—C2—C75.1 (3)C10—N2—C11—C1261.7 (2)
C7—C2—C3—C4−2.5 (3)N1—C8—C12—C11−127.6 (2)
C1—C2—C3—C4177.67 (19)C9—C8—C12—C1149.4 (3)
C7—C2—C3—Br1175.90 (15)N2—C11—C12—C8−54.7 (2)
C1—C2—C3—Br1−3.9 (3)C11—N2—C13—C1468.1 (3)
C2—C3—C4—C51.4 (3)C10—N2—C13—C14−170.8 (2)
Br1—C3—C4—C5−177.08 (16)N2—C13—C14—C1974.1 (3)
C3—C4—C5—C60.7 (3)N2—C13—C14—C15−106.4 (3)
C4—C5—C6—C7−1.4 (3)C19—C14—C15—C160.5 (3)
C5—C6—C7—C20.2 (3)C13—C14—C15—C16−179.0 (2)
C3—C2—C7—C61.7 (3)C14—C15—C16—C170.2 (4)
C1—C2—C7—C6−178.5 (2)C15—C16—C17—C18−1.0 (4)
O1—N1—C8—C93.7 (3)C16—C17—C18—C191.0 (4)
O1—N1—C8—C12−179.76 (17)C17—C18—C19—C14−0.3 (4)
N1—C8—C9—C10127.6 (2)C15—C14—C19—C18−0.5 (3)
C12—C8—C9—C10−49.1 (3)C13—C14—C19—C18179.0 (2)
C11—N2—C10—C9−61.2 (2)
  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis of polyfunctionalized piperidone oxime ethers and their cytotoxicity on HeLa cells.

Authors:  Paramasivam Parthiban; Ramjee Pallela; Se-Kwon Kim; Dong Ho Park; Yeon Tae Jeong
Journal:  Bioorg Med Chem Lett       Date:  2011-09-21       Impact factor: 2.823

3.  Synthesis of N-substituted piperidine-4-(benzylidene-4-carboxylic acids) and evaluation as inhibitors of steroid-5alpha-reductase type 1 and 2.

Authors:  F Picard; E Baston; W Reichert; R W Hartmann
Journal:  Bioorg Med Chem       Date:  2000-06       Impact factor: 3.641

4.  Synthesis, spectral, crystal and antimicrobial studies of biologically potent oxime ethers of nitrogen, oxygen and sulfur heterocycles.

Authors:  Paramasivam Parthiban; Gopalakrishnan Aridoss; Paramasivam Rathika; Venkatachalam Ramkumar; Senthamaraikannan Kabilan
Journal:  Bioorg Med Chem Lett       Date:  2009-04-18       Impact factor: 2.823

  4 in total

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