Literature DB >> 23125738

N-(4-Chloro-phen-yl)-1-(5-{[(2-phenyl-ethen-yl)sulfon-yl]meth-yl}-1,3,4-oxadiazol-2-yl)methane-sulfonamide.

A Muralikrishna1, M Kannan, V Padmavathi, A Padmaja, R Krishna.   

Abstract

In the title compound, C(18)H(16)ClN(3)O(5)S(2), the dihedral angles between the oxadiazole ring and the phenyl and chloro-benzene rings are 23.4 (2) and 45.4 (2)°, respectively. The C-S-N-C and C(ox)-C-S-C (ox = oxadiazole) torsion angles are 89.3 (5) and -69.1 (3)°, respectively. A short intra-molecular C-H⋯O contact closes an S(6) ring. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, generating C(10) chains propagating in [001]. The packing is consolidated by C-H⋯O, C-H⋯π and very weak aromatic π-π stacking inter-actions [centroid-centroid separation = 4.085 (2) Å].

Entities:  

Year:  2012        PMID: 23125738      PMCID: PMC3470325          DOI: 10.1107/S1600536812037300

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and biological activity of the title compound, see: Padmaja et al. (2011 ▶); Muralikrishna et al. (2012 ▶). For related structures, see: Ranjith et al. (2009 ▶); You et al. (2004 ▶).

Experimental

Crystal data

C18H16ClN3O5S2 M = 453.93 Monoclinic, a = 21.1387 (12) Å b = 5.4443 (2) Å c = 18.3484 (11) Å β = 107.810 (7)° V = 2010.4 (2) Å3 Z = 4 Mo Kα radiation μ = 0.43 mm−1 T = 293 K 0.20 × 0.20 × 0.06 mm

Data collection

Oxford Diffraction Xcalibur Eos diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.917, T max = 0.974 8939 measured reflections 3541 independent reflections 2114 reflections with I > 2σ(I) R int = 0.052

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.171 S = 0.87 3541 reflections 262 parameters H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.29 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812037300/hb6934sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812037300/hb6934Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812037300/hb6934Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H16ClN3O5S2F(000) = 936
Mr = 453.93Dx = 1.513 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.7107 Å
Hall symbol: -P 2ybcCell parameters from 2041 reflections
a = 21.1387 (12) Åθ = 2.6–29.2°
b = 5.4443 (2) ŵ = 0.43 mm1
c = 18.3484 (11) ÅT = 293 K
β = 107.810 (7)°Plate, colourless
V = 2010.4 (2) Å30.20 × 0.20 × 0.06 mm
Z = 4
Oxford Diffraction Xcalibur Eos diffractometer3541 independent reflections
Radiation source: Enhance (Mo) X-ray Source2114 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.052
Detector resolution: 15.9821 pixels mm-1θmax = 25.0°, θmin = 2.6°
ω scansh = −25→22
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −6→6
Tmin = 0.917, Tmax = 0.974l = −2→21
8939 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.171H-atom parameters constrained
S = 0.87w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
3541 reflections(Δ/σ)max < 0.001
262 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.10737 (6)0.1465 (2)0.99341 (7)0.0506 (4)
S20.20592 (5)−0.11531 (16)0.70760 (6)0.0365 (3)
Cl0.40975 (8)0.2776 (3)0.90563 (11)0.0990 (6)
O10.09206 (13)−0.0641 (5)0.80065 (15)0.0409 (7)
O50.21845 (15)−0.2584 (5)0.64804 (18)0.0506 (8)
O40.22585 (15)−0.2151 (5)0.78332 (18)0.0558 (9)
O20.08523 (16)0.0536 (7)1.05419 (19)0.0720 (10)
N10.07298 (17)0.2839 (6)0.7363 (2)0.0450 (9)
C10.09493 (18)0.0632 (7)0.7380 (2)0.0348 (9)
O30.11247 (18)0.4033 (6)0.9846 (2)0.0719 (10)
N30.17730 (17)0.0164 (7)1.0028 (2)0.0574 (11)
H30.1836−0.11711.02910.069*
N20.05241 (18)0.3095 (7)0.8019 (2)0.0500 (10)
C100.11833 (19)−0.0673 (7)0.6803 (2)0.0403 (10)
H10A0.10500.02600.63310.048*
H10B0.0963−0.22560.67010.048*
C130.3483 (2)0.0561 (7)0.6906 (3)0.0454 (11)
C140.3805 (2)0.0969 (8)0.6365 (3)0.0577 (13)
H140.36840.23160.60400.069*
C70.3391 (2)0.1971 (9)0.9301 (3)0.0568 (13)
C60.2849 (3)0.3435 (8)0.9081 (3)0.0530 (12)
H60.28470.48180.87830.064*
C80.3399 (2)−0.0127 (9)0.9717 (3)0.0557 (13)
H80.3767−0.11580.98390.067*
C90.2858 (2)−0.0691 (8)0.9950 (3)0.0496 (11)
H90.2863−0.20971.02390.059*
C180.3694 (2)−0.1416 (8)0.7403 (3)0.0526 (13)
H180.3497−0.17150.77830.063*
C30.0515 (2)0.0242 (9)0.9082 (2)0.0534 (12)
H3A0.0535−0.15370.91120.064*
H3B0.00670.07300.90540.064*
C120.2957 (2)0.2238 (7)0.6963 (3)0.0539 (13)
H120.30470.38940.69210.065*
C110.2379 (2)0.1785 (7)0.7066 (3)0.0464 (12)
H110.21270.31120.71370.056*
C50.2297 (2)0.2862 (8)0.9301 (3)0.0513 (12)
H50.19200.38480.91440.062*
C20.06481 (19)0.1027 (8)0.8369 (2)0.0412 (10)
C40.2303 (2)0.0831 (7)0.9755 (2)0.0442 (11)
C170.4193 (2)−0.2922 (9)0.7334 (3)0.0633 (15)
H170.4330−0.42300.76710.076*
C150.4302 (2)−0.0575 (10)0.6295 (3)0.0667 (15)
H150.4507−0.02830.59210.080*
C160.4491 (2)−0.2543 (9)0.6781 (4)0.0674 (16)
H160.4820−0.36100.67330.081*
U11U22U33U12U13U23
S10.0458 (7)0.0765 (9)0.0334 (7)0.0029 (6)0.0177 (5)−0.0018 (6)
S20.0403 (6)0.0290 (5)0.0402 (7)0.0032 (4)0.0122 (5)−0.0008 (5)
Cl0.0756 (11)0.1391 (14)0.1018 (13)−0.0272 (9)0.0562 (10)−0.0005 (10)
O10.0424 (17)0.0491 (16)0.0336 (17)0.0029 (13)0.0153 (14)0.0082 (13)
O50.0518 (19)0.0459 (16)0.056 (2)0.0031 (13)0.0189 (16)−0.0183 (14)
O40.053 (2)0.0610 (18)0.050 (2)0.0075 (14)0.0103 (16)0.0195 (16)
O20.059 (2)0.123 (3)0.042 (2)0.000 (2)0.0281 (17)0.003 (2)
N10.048 (2)0.050 (2)0.040 (2)0.0115 (17)0.0184 (18)0.0058 (17)
C10.030 (2)0.043 (2)0.029 (2)−0.0014 (17)0.0059 (18)0.0037 (18)
O30.091 (3)0.063 (2)0.066 (3)0.0071 (18)0.032 (2)−0.0110 (17)
N30.039 (2)0.078 (3)0.057 (3)0.0039 (19)0.0164 (19)0.027 (2)
N20.051 (2)0.060 (2)0.042 (2)0.0137 (18)0.0184 (19)−0.0010 (19)
C100.043 (3)0.043 (2)0.037 (3)0.0001 (19)0.015 (2)0.0014 (19)
C130.039 (3)0.038 (2)0.059 (3)−0.0046 (19)0.014 (2)−0.004 (2)
C140.050 (3)0.054 (3)0.067 (4)0.001 (2)0.014 (3)0.013 (2)
C70.060 (3)0.070 (3)0.048 (3)−0.019 (3)0.027 (3)−0.014 (3)
C60.069 (4)0.052 (3)0.042 (3)−0.006 (2)0.023 (3)0.008 (2)
C80.050 (3)0.063 (3)0.057 (3)0.006 (2)0.022 (3)−0.005 (3)
C90.053 (3)0.048 (2)0.048 (3)0.005 (2)0.016 (2)0.007 (2)
C180.039 (3)0.049 (3)0.069 (4)−0.001 (2)0.015 (2)0.007 (2)
C30.044 (3)0.083 (3)0.037 (3)−0.005 (2)0.020 (2)0.002 (2)
C120.051 (3)0.034 (2)0.080 (4)0.002 (2)0.026 (3)0.006 (2)
C110.042 (3)0.032 (2)0.069 (3)0.0069 (18)0.023 (2)−0.003 (2)
C50.047 (3)0.053 (3)0.053 (3)0.000 (2)0.013 (2)0.013 (2)
C20.031 (2)0.059 (3)0.034 (3)0.0007 (19)0.0091 (19)0.001 (2)
C40.041 (3)0.057 (3)0.033 (3)−0.009 (2)0.010 (2)0.000 (2)
C170.039 (3)0.057 (3)0.087 (4)0.005 (2)0.010 (3)0.015 (3)
C150.046 (3)0.085 (4)0.075 (4)−0.003 (3)0.027 (3)−0.010 (3)
C160.043 (3)0.061 (3)0.096 (5)0.002 (2)0.018 (3)−0.013 (3)
S1—O31.415 (3)C7—C61.353 (7)
S1—O21.428 (3)C7—C81.370 (7)
S1—N31.600 (4)C6—C51.383 (6)
S1—C31.775 (5)C6—H60.9300
S2—O41.430 (3)C8—C91.373 (6)
S2—O51.431 (3)C8—H80.9300
S2—C111.739 (4)C9—C41.391 (6)
S2—C101.783 (4)C9—H90.9300
Cl—C71.741 (5)C18—C171.371 (6)
O1—C21.354 (5)C18—H180.9300
O1—C11.359 (4)C3—C21.484 (6)
N1—C11.285 (5)C3—H3A0.9700
N1—N21.406 (5)C3—H3B0.9700
C1—C101.480 (5)C12—C111.315 (6)
N3—C41.409 (5)C12—H120.9300
N3—H30.8600C11—H110.9300
N2—C21.283 (5)C5—C41.381 (6)
C10—H10A0.9700C5—H50.9300
C10—H10B0.9700C17—C161.365 (7)
C13—C141.382 (6)C17—H170.9300
C13—C181.393 (6)C15—C161.373 (7)
C13—C121.468 (6)C15—H150.9300
C14—C151.382 (6)C16—H160.9300
C14—H140.9300
O3—S1—O2119.6 (2)C5—C6—H6120.2
O3—S1—O2119.6 (2)C7—C8—C9119.4 (4)
O3—S1—N3110.4 (2)C7—C8—H8120.3
O3—S1—N3110.4 (2)C9—C8—H8120.3
O2—S1—N3105.8 (2)C8—C9—C4120.3 (4)
O3—S1—C3108.9 (2)C8—C9—H9119.9
O3—S1—C3108.9 (2)C4—C9—H9119.9
O2—S1—C3105.4 (2)C17—C18—C13120.1 (5)
N3—S1—C3105.8 (2)C17—C18—H18119.9
O4—S2—O5117.81 (18)C13—C18—H18119.9
O4—S2—C11111.1 (2)C2—C3—S1114.5 (3)
O5—S2—C11109.2 (2)C2—C3—H3A108.6
O4—S2—C10107.48 (19)S1—C3—H3A108.6
O5—S2—C10106.52 (18)C2—C3—H3B108.6
C11—S2—C10103.63 (19)S1—C3—H3B108.6
C2—O1—C1102.1 (3)H3A—C3—H3B107.6
C1—N1—N2106.0 (3)C11—C12—C13130.7 (4)
N1—C1—O1112.8 (4)C11—C12—H12114.7
N1—C1—C10129.0 (4)C13—C12—H12114.7
O1—C1—C10118.1 (3)C12—C11—S2123.7 (3)
C4—N3—S1131.0 (3)C12—C11—H11118.1
C4—N3—H3114.5S2—C11—H11118.1
S1—N3—H3114.5C4—C5—C6120.2 (4)
C2—N2—N1105.8 (3)C4—C5—H5119.9
C1—C10—S2114.5 (3)C6—C5—H5119.9
C1—C10—H10A108.6N2—C2—O1113.3 (4)
S2—C10—H10A108.6N2—C2—C3129.0 (4)
C1—C10—H10B108.6O1—C2—C3117.7 (4)
S2—C10—H10B108.6C5—C4—C9118.9 (4)
H10A—C10—H10B107.6C5—C4—N3124.0 (4)
C14—C13—C18117.8 (4)C9—C4—N3117.1 (4)
C14—C13—C12120.1 (4)C16—C17—C18121.5 (5)
C18—C13—C12122.0 (4)C16—C17—H17119.3
C15—C14—C13121.6 (5)C18—C17—H17119.3
C15—C14—H14119.2C16—C15—C14119.5 (5)
C13—C14—H14119.2C16—C15—H15120.2
C6—C7—C8121.5 (4)C14—C15—H15120.2
C6—C7—Cl119.3 (4)C17—C16—C15119.5 (5)
C8—C7—Cl119.2 (4)C17—C16—H16120.3
C7—C6—C5119.6 (4)C15—C16—H16120.3
C7—C6—H6120.2
N2—N1—C1—O1−1.1 (4)O2—S1—C3—C2178.8 (3)
N2—N1—C1—C10175.3 (4)N3—S1—C3—C2−69.4 (4)
C2—O1—C1—N10.9 (4)C14—C13—C12—C11138.1 (6)
C2—O1—C1—C10−175.9 (3)C18—C13—C12—C11−44.4 (8)
O3—S1—N3—C4−28.4 (5)C13—C12—C11—S2−6.0 (9)
O3—S1—N3—C4−28.4 (5)O4—S2—C11—C1289.9 (5)
O2—S1—N3—C4−159.1 (4)O5—S2—C11—C12−41.7 (5)
C3—S1—N3—C489.3 (5)C10—S2—C11—C12−154.9 (5)
C1—N1—N2—C20.8 (4)C7—C6—C5—C41.1 (7)
N1—C1—C10—S2108.0 (4)N1—N2—C2—O1−0.2 (5)
O1—C1—C10—S2−75.8 (4)N1—N2—C2—C3−178.2 (4)
O4—S2—C10—C148.6 (3)C1—O1—C2—N2−0.4 (4)
O5—S2—C10—C1175.8 (3)C1—O1—C2—C3177.8 (3)
C11—S2—C10—C1−69.1 (3)S1—C3—C2—N2−76.1 (6)
C18—C13—C14—C152.5 (7)S1—C3—C2—O1106.1 (4)
C12—C13—C14—C15−179.9 (5)C6—C5—C4—C9−3.4 (7)
C8—C7—C6—C52.4 (7)C6—C5—C4—N3177.6 (4)
Cl—C7—C6—C5−177.2 (4)C8—C9—C4—C52.3 (7)
C6—C7—C8—C9−3.5 (7)C8—C9—C4—N3−178.6 (4)
Cl—C7—C8—C9176.2 (4)S1—N3—C4—C5−2.1 (7)
C7—C8—C9—C41.1 (7)S1—N3—C4—C9178.9 (3)
C14—C13—C18—C17−1.8 (7)C13—C18—C17—C16−0.3 (7)
C12—C13—C18—C17−179.3 (4)C13—C14—C15—C16−1.1 (8)
O3—S1—C3—C249.3 (4)C18—C17—C16—C151.8 (8)
O3—S1—C3—C249.3 (4)C14—C15—C16—C17−1.0 (8)
D—H···AD—HH···AD···AD—H···A
C5—H5···O30.932.413.010 (6)122
N3—H3···O5i0.862.192.900 (5)140
C3—H3B···O2ii0.972.383.198 (5)141
C6—H6···O4iii0.932.453.290 (5)151
C12—H12···O5iii0.932.603.242 (5)127
C14—H14···Cgiv0.932.903.670 (5)141
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C4–C9 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯O30.932.413.010 (6)122
N3—H3⋯O5i 0.862.192.900 (5)140
C3—H3B⋯O2ii 0.972.383.198 (5)141
C6—H6⋯O4iii 0.932.453.290 (5)151
C12—H12⋯O5iii 0.932.603.242 (5)127
C14—H14⋯Cg iv 0.932.903.670 (5)141

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  6 in total

1.  Synthesis and antimicrobial activity of pyrrolyl/pyrazolyl arylaminosulfonylmethyl 1,3,4-oxadiazoles, 1,3,4-thiadiazoles and 1,2,4-triazoles.

Authors:  Adivireddy Padmaja; Akkarapalli Muralikrishna; Chittoor Rajasekhar; Venkatapuram Padmavathi
Journal:  Chem Pharm Bull (Tokyo)       Date:  2011       Impact factor: 1.645

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  3,3'-(p-Phenyl-ene)bis-(3,4-dihydro-2H-1,3-benzoxazine).

Authors:  Sekaran Ranjith; Sundar Thenmozhi; Ramaiyan Manikannan; Shanmugam Muthusubramanian; Arunachalathevar Subbiahpandi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-25

4.  Synthesis, antimicrobial and cytotoxic activities of sulfone linked bis heterocycles.

Authors:  A Muralikrishna; B C Venkatesh; V Padmavathi; A Padmaja; P Kondaiah; N Siva Krishna
Journal:  Eur J Med Chem       Date:  2012-06-17       Impact factor: 6.514

5.  C-H...pi, pi-pi and C-H...Cl interactions in chloro-substituted Schiff bases and 4-chloro-N-[4-(dimethylamino)benzylidene]aniline.

Authors:  Xiu-Li You; Cheng-Rong Lu; Yong Zhang; De-Chun Zhang
Journal:  Acta Crystallogr C       Date:  2004-08-21       Impact factor: 1.172

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total
  1 in total

1.  Crystal structure and Hirshfeld surface analysis of N-{[5-(4-methyl-phen-yl)-1,2-oxazol-3-yl]meth-yl}-1-phenyl-N-(prop-2-en-1-yl)methane-sulfonamide.

Authors:  Victor N Khrustalev; Sevim Türktekin Çelikesir; Mehmet Akkurt; Irina A Kolesnik; Vladimir I Potkin; Sixberth Mlowe
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-05-17
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.