| Literature DB >> 23125737 |
Sohail Saeed1, Naghmana Rashid, Ray J Butcher, Sema Oztürk Yildirim, Rizwan Hussain.
Abstract
In the title compound, C(19)H(25)N(3)O(5), the benzene ring is not coplanar with the amide group [dihedral angle = 61.90 (5)°]. The cyclo-hexyl rings are in chair conformations. There is a strong inter-molecular inter-action between the C=O group of the amide group and the nitro group of an adjoining mol-ecule, with a short O⋯N distance of 2.7862 (17) Å. In the crystal, C-H⋯O inter-actions occur along the [100] direction.Entities:
Year: 2012 PMID: 23125737 PMCID: PMC3470324 DOI: 10.1107/S1600536812038500
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H25N3O5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Cu |
| Cell parameters from 2277 reflections | |
| θ = 3.0–75.2° | |
| µ = 0.79 mm−1 | |
| α = 92.512 (8)° | |
| β = 98.898 (8)° | `needle-plate`, colorless |
| γ = 99.704 (9)° | 0.51 × 0.17 × 0.04 mm |
| Agilent Xcalibur Ruby Gemini diffractometer | 3811 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 3144 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 75.4°, θmin = 3.0° |
| ω scans | |
| Absorption correction: multi-scan [ | |
| 6078 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3811 reflections | (Δ/σ)max < 0.001 |
| 244 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Experimental. Absorption correction: CrysAlis RED, (Agilent, 2011) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. (Clark & Reid, 1995). |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.23442 (17) | 0.94242 (13) | 0.55223 (8) | 0.0308 (3) | |
| O2 | 0.4677 (2) | 0.98065 (14) | 0.67312 (8) | 0.0362 (3) | |
| O3 | 1.03595 (18) | 0.75165 (13) | 0.69435 (7) | 0.0325 (3) | |
| O4 | 1.08761 (16) | 0.63134 (13) | 0.57626 (8) | 0.0303 (3) | |
| O5 | 0.29440 (16) | 0.51429 (12) | 0.34083 (7) | 0.0274 (3) | |
| N1 | 0.3957 (2) | 0.92478 (14) | 0.59620 (9) | 0.0259 (3) | |
| N2 | 0.98833 (19) | 0.70201 (14) | 0.61477 (8) | 0.0252 (3) | |
| N3 | 0.54384 (18) | 0.61099 (13) | 0.26430 (8) | 0.0220 (3) | |
| C1 | 0.5115 (2) | 0.83290 (15) | 0.55400 (10) | 0.0234 (3) | |
| C2 | 0.6958 (2) | 0.81731 (16) | 0.60284 (9) | 0.0234 (3) | |
| H2A | 0.7478 | 0.8646 | 0.6615 | 0.028* | |
| C3 | 0.7997 (2) | 0.72959 (16) | 0.56194 (10) | 0.0226 (3) | |
| C4 | 0.7312 (2) | 0.66292 (16) | 0.47469 (9) | 0.0228 (3) | |
| H4A | 0.8090 | 0.6051 | 0.4479 | 0.027* | |
| C5 | 0.5460 (2) | 0.68296 (16) | 0.42755 (9) | 0.0227 (3) | |
| C6 | 0.4320 (2) | 0.76562 (16) | 0.46813 (10) | 0.0233 (3) | |
| H6A | 0.3025 | 0.7759 | 0.4377 | 0.028* | |
| C7 | 0.4509 (2) | 0.59667 (16) | 0.33856 (9) | 0.0222 (3) | |
| C8 | 0.4805 (2) | 0.50539 (16) | 0.18488 (9) | 0.0230 (3) | |
| H8A | 0.5724 | 0.5316 | 0.1394 | 0.028* | |
| C9 | 0.5117 (2) | 0.36144 (17) | 0.21379 (10) | 0.0291 (3) | |
| H9A | 0.4270 | 0.3328 | 0.2609 | 0.035* | |
| H9B | 0.6545 | 0.3654 | 0.2415 | 0.035* | |
| C10 | 0.4561 (3) | 0.25421 (18) | 0.13107 (11) | 0.0329 (4) | |
| H10A | 0.5498 | 0.2776 | 0.0868 | 0.040* | |
| H10B | 0.4701 | 0.1610 | 0.1519 | 0.040* | |
| C11 | 0.2403 (3) | 0.25131 (18) | 0.08358 (11) | 0.0338 (4) | |
| H11A | 0.2087 | 0.1835 | 0.0293 | 0.041* | |
| H11B | 0.1458 | 0.2211 | 0.1264 | 0.041* | |
| C12 | 0.2126 (3) | 0.39444 (18) | 0.05318 (10) | 0.0325 (4) | |
| H12A | 0.0709 | 0.3907 | 0.0237 | 0.039* | |
| H12B | 0.3004 | 0.4216 | 0.0070 | 0.039* | |
| C13 | 0.2648 (2) | 0.50401 (17) | 0.13510 (10) | 0.0270 (3) | |
| H13A | 0.2535 | 0.5969 | 0.1130 | 0.032* | |
| H13B | 0.1683 | 0.4825 | 0.1784 | 0.032* | |
| C14 | 0.7089 (2) | 0.72822 (15) | 0.25786 (9) | 0.0216 (3) | |
| H14A | 0.7252 | 0.7921 | 0.3144 | 0.026* | |
| C15 | 0.6558 (2) | 0.81222 (16) | 0.17448 (9) | 0.0236 (3) | |
| H15A | 0.6357 | 0.7516 | 0.1171 | 0.028* | |
| H15B | 0.5283 | 0.8461 | 0.1784 | 0.028* | |
| C16 | 0.8253 (2) | 0.93638 (17) | 0.17186 (10) | 0.0275 (3) | |
| H16A | 0.7932 | 0.9849 | 0.1154 | 0.033* | |
| H16B | 0.8334 | 1.0027 | 0.2255 | 0.033* | |
| C17 | 1.0291 (2) | 0.89085 (18) | 0.17335 (11) | 0.0294 (3) | |
| H17A | 1.1359 | 0.9739 | 0.1764 | 0.035* | |
| H17B | 1.0269 | 0.8340 | 0.1159 | 0.035* | |
| C18 | 1.0770 (2) | 0.80630 (17) | 0.25612 (10) | 0.0276 (3) | |
| H18A | 1.0916 | 0.8660 | 0.3136 | 0.033* | |
| H18C | 1.2067 | 0.7745 | 0.2542 | 0.033* | |
| C19 | 0.9104 (2) | 0.68002 (16) | 0.25653 (10) | 0.0251 (3) | |
| H19C | 0.9008 | 0.6170 | 0.2010 | 0.030* | |
| H19A | 0.9432 | 0.6283 | 0.3114 | 0.030* |
| O1 | 0.0303 (6) | 0.0312 (6) | 0.0329 (6) | 0.0102 (5) | 0.0063 (4) | 0.0034 (5) |
| O2 | 0.0422 (7) | 0.0403 (7) | 0.0264 (5) | 0.0109 (5) | 0.0059 (5) | −0.0091 (5) |
| O3 | 0.0332 (6) | 0.0371 (6) | 0.0230 (5) | 0.0058 (5) | −0.0054 (4) | −0.0046 (5) |
| O4 | 0.0261 (5) | 0.0339 (6) | 0.0309 (5) | 0.0080 (5) | 0.0028 (4) | −0.0002 (5) |
| O5 | 0.0273 (5) | 0.0304 (6) | 0.0222 (5) | −0.0011 (4) | 0.0046 (4) | 0.0000 (4) |
| N1 | 0.0297 (6) | 0.0251 (6) | 0.0239 (6) | 0.0046 (5) | 0.0075 (5) | 0.0031 (5) |
| N2 | 0.0251 (6) | 0.0250 (6) | 0.0236 (6) | 0.0010 (5) | 0.0018 (5) | 0.0018 (5) |
| N3 | 0.0231 (6) | 0.0238 (6) | 0.0178 (5) | 0.0020 (5) | 0.0022 (4) | −0.0009 (4) |
| C1 | 0.0281 (7) | 0.0222 (7) | 0.0208 (6) | 0.0032 (6) | 0.0077 (5) | 0.0030 (5) |
| C2 | 0.0281 (7) | 0.0239 (7) | 0.0171 (6) | 0.0007 (5) | 0.0048 (5) | 0.0006 (5) |
| C3 | 0.0223 (6) | 0.0241 (7) | 0.0204 (6) | 0.0009 (5) | 0.0031 (5) | 0.0031 (5) |
| C4 | 0.0248 (7) | 0.0243 (7) | 0.0195 (6) | 0.0030 (5) | 0.0065 (5) | 0.0006 (5) |
| C5 | 0.0266 (7) | 0.0248 (7) | 0.0158 (6) | 0.0009 (5) | 0.0045 (5) | 0.0024 (5) |
| C6 | 0.0241 (6) | 0.0264 (7) | 0.0192 (6) | 0.0030 (5) | 0.0033 (5) | 0.0051 (5) |
| C7 | 0.0242 (6) | 0.0230 (7) | 0.0194 (6) | 0.0055 (5) | 0.0020 (5) | 0.0017 (5) |
| C8 | 0.0272 (7) | 0.0239 (7) | 0.0167 (6) | 0.0021 (5) | 0.0035 (5) | −0.0013 (5) |
| C9 | 0.0344 (8) | 0.0282 (8) | 0.0234 (7) | 0.0087 (6) | −0.0021 (6) | −0.0001 (6) |
| C10 | 0.0441 (9) | 0.0260 (8) | 0.0292 (8) | 0.0103 (7) | 0.0044 (7) | −0.0024 (6) |
| C11 | 0.0447 (9) | 0.0268 (8) | 0.0249 (7) | 0.0002 (7) | −0.0009 (7) | −0.0044 (6) |
| C12 | 0.0403 (9) | 0.0312 (8) | 0.0213 (7) | 0.0040 (7) | −0.0050 (6) | −0.0033 (6) |
| C13 | 0.0308 (7) | 0.0273 (8) | 0.0213 (7) | 0.0073 (6) | −0.0017 (6) | −0.0021 (6) |
| C14 | 0.0242 (6) | 0.0230 (7) | 0.0169 (6) | 0.0026 (5) | 0.0032 (5) | 0.0006 (5) |
| C15 | 0.0267 (7) | 0.0250 (7) | 0.0191 (6) | 0.0053 (5) | 0.0027 (5) | 0.0021 (5) |
| C16 | 0.0323 (7) | 0.0251 (7) | 0.0245 (7) | 0.0027 (6) | 0.0045 (6) | 0.0043 (6) |
| C17 | 0.0288 (7) | 0.0309 (8) | 0.0271 (7) | −0.0007 (6) | 0.0065 (6) | 0.0038 (6) |
| C18 | 0.0228 (7) | 0.0316 (8) | 0.0270 (7) | 0.0023 (6) | 0.0025 (5) | 0.0032 (6) |
| C19 | 0.0235 (7) | 0.0275 (7) | 0.0244 (7) | 0.0045 (6) | 0.0042 (5) | 0.0034 (5) |
| O1—N1 | 1.2300 (18) | C10—H10A | 0.9900 |
| O2—N1 | 1.2284 (18) | C10—H10B | 0.9900 |
| O3—N2 | 1.2235 (17) | C11—C12 | 1.522 (2) |
| O4—N2 | 1.2253 (18) | C11—H11A | 0.9900 |
| O5—C7 | 1.2299 (19) | C11—H11B | 0.9900 |
| N1—C1 | 1.470 (2) | C12—C13 | 1.536 (2) |
| N2—C3 | 1.4696 (19) | C12—H12A | 0.9900 |
| N3—C7 | 1.3486 (19) | C12—H12B | 0.9900 |
| N3—C14 | 1.4831 (18) | C13—H13A | 0.9900 |
| N3—C8 | 1.4874 (17) | C13—H13B | 0.9900 |
| C1—C2 | 1.384 (2) | C14—C19 | 1.528 (2) |
| C1—C6 | 1.387 (2) | C14—C15 | 1.5392 (19) |
| C2—C3 | 1.376 (2) | C14—H14A | 1.0000 |
| C2—H2A | 0.9500 | C15—C16 | 1.536 (2) |
| C3—C4 | 1.391 (2) | C15—H15A | 0.9900 |
| C4—C5 | 1.393 (2) | C15—H15B | 0.9900 |
| C4—H4A | 0.9500 | C16—C17 | 1.526 (2) |
| C5—C6 | 1.389 (2) | C16—H16A | 0.9900 |
| C5—C7 | 1.5199 (19) | C16—H16B | 0.9900 |
| C6—H6A | 0.9500 | C17—C18 | 1.529 (2) |
| C8—C9 | 1.529 (2) | C17—H17A | 0.9900 |
| C8—C13 | 1.536 (2) | C17—H17B | 0.9900 |
| C8—H8A | 1.0000 | C18—C19 | 1.532 (2) |
| C9—C10 | 1.531 (2) | C18—H18A | 0.9900 |
| C9—H9A | 0.9900 | C18—H18C | 0.9900 |
| C9—H9B | 0.9900 | C19—H19C | 0.9900 |
| C10—C11 | 1.523 (2) | C19—H19A | 0.9900 |
| O2—N1—O1 | 123.96 (14) | C12—C11—H11B | 109.5 |
| O2—N1—C1 | 117.72 (13) | C10—C11—H11B | 109.5 |
| O1—N1—C1 | 118.31 (13) | H11A—C11—H11B | 108.1 |
| O3—N2—O4 | 124.38 (13) | C11—C12—C13 | 111.33 (13) |
| O3—N2—C3 | 117.65 (13) | C11—C12—H12A | 109.4 |
| O4—N2—C3 | 117.97 (12) | C13—C12—H12A | 109.4 |
| C7—N3—C14 | 122.84 (12) | C11—C12—H12B | 109.4 |
| C7—N3—C8 | 119.34 (12) | C13—C12—H12B | 109.4 |
| C14—N3—C8 | 117.82 (11) | H12A—C12—H12B | 108.0 |
| C2—C1—C6 | 123.08 (15) | C8—C13—C12 | 110.00 (13) |
| C2—C1—N1 | 117.81 (13) | C8—C13—H13A | 109.7 |
| C6—C1—N1 | 119.12 (14) | C12—C13—H13A | 109.7 |
| C3—C2—C1 | 116.45 (13) | C8—C13—H13B | 109.7 |
| C3—C2—H2A | 121.8 | C12—C13—H13B | 109.7 |
| C1—C2—H2A | 121.8 | H13A—C13—H13B | 108.2 |
| C2—C3—C4 | 123.15 (14) | N3—C14—C19 | 112.10 (12) |
| C2—C3—N2 | 117.98 (13) | N3—C14—C15 | 111.61 (11) |
| C4—C3—N2 | 118.84 (14) | C19—C14—C15 | 111.05 (12) |
| C3—C4—C5 | 118.39 (14) | N3—C14—H14A | 107.3 |
| C3—C4—H4A | 120.8 | C19—C14—H14A | 107.3 |
| C5—C4—H4A | 120.8 | C15—C14—H14A | 107.3 |
| C6—C5—C4 | 120.26 (13) | C16—C15—C14 | 110.47 (12) |
| C6—C5—C7 | 118.74 (13) | C16—C15—H15A | 109.6 |
| C4—C5—C7 | 120.25 (14) | C14—C15—H15A | 109.6 |
| C1—C6—C5 | 118.57 (14) | C16—C15—H15B | 109.6 |
| C1—C6—H6A | 120.7 | C14—C15—H15B | 109.6 |
| C5—C6—H6A | 120.7 | H15A—C15—H15B | 108.1 |
| O5—C7—N3 | 124.41 (13) | C17—C16—C15 | 111.74 (13) |
| O5—C7—C5 | 116.40 (12) | C17—C16—H16A | 109.3 |
| N3—C7—C5 | 119.15 (12) | C15—C16—H16A | 109.3 |
| N3—C8—C9 | 110.96 (11) | C17—C16—H16B | 109.3 |
| N3—C8—C13 | 113.26 (12) | C15—C16—H16B | 109.3 |
| C9—C8—C13 | 111.99 (13) | H16A—C16—H16B | 107.9 |
| N3—C8—H8A | 106.7 | C16—C17—C18 | 110.80 (13) |
| C9—C8—H8A | 106.7 | C16—C17—H17A | 109.5 |
| C13—C8—H8A | 106.7 | C18—C17—H17A | 109.5 |
| C8—C9—C10 | 110.91 (12) | C16—C17—H17B | 109.5 |
| C8—C9—H9A | 109.5 | C18—C17—H17B | 109.5 |
| C10—C9—H9A | 109.5 | H17A—C17—H17B | 108.1 |
| C8—C9—H9B | 109.5 | C17—C18—C19 | 111.27 (12) |
| C10—C9—H9B | 109.5 | C17—C18—H18A | 109.4 |
| H9A—C9—H9B | 108.0 | C19—C18—H18A | 109.4 |
| C11—C10—C9 | 110.78 (14) | C17—C18—H18C | 109.4 |
| C11—C10—H10A | 109.5 | C19—C18—H18C | 109.4 |
| C9—C10—H10A | 109.5 | H18A—C18—H18C | 108.0 |
| C11—C10—H10B | 109.5 | C14—C19—C18 | 109.64 (13) |
| C9—C10—H10B | 109.5 | C14—C19—H19C | 109.7 |
| H10A—C10—H10B | 108.1 | C18—C19—H19C | 109.7 |
| C12—C11—C10 | 110.67 (14) | C14—C19—H19A | 109.7 |
| C12—C11—H11A | 109.5 | C18—C19—H19A | 109.7 |
| C10—C11—H11A | 109.5 | H19C—C19—H19A | 108.2 |
| O2—N1—C1—C2 | −1.2 (2) | C6—C5—C7—N3 | 124.80 (15) |
| O1—N1—C1—C2 | 177.97 (13) | C4—C5—C7—N3 | −65.11 (19) |
| O2—N1—C1—C6 | 178.46 (14) | C7—N3—C8—C9 | −60.72 (17) |
| O1—N1—C1—C6 | −2.4 (2) | C14—N3—C8—C9 | 119.11 (14) |
| C6—C1—C2—C3 | −0.3 (2) | C7—N3—C8—C13 | 66.24 (17) |
| N1—C1—C2—C3 | 179.38 (12) | C14—N3—C8—C13 | −113.94 (14) |
| C1—C2—C3—C4 | 2.5 (2) | N3—C8—C9—C10 | −177.25 (12) |
| C1—C2—C3—N2 | −175.35 (13) | C13—C8—C9—C10 | 55.10 (17) |
| O3—N2—C3—C2 | 4.5 (2) | C8—C9—C10—C11 | −56.00 (18) |
| O4—N2—C3—C2 | −175.30 (13) | C9—C10—C11—C12 | 57.49 (18) |
| O3—N2—C3—C4 | −173.47 (13) | C10—C11—C12—C13 | −57.87 (19) |
| O4—N2—C3—C4 | 6.7 (2) | N3—C8—C13—C12 | 178.94 (12) |
| C2—C3—C4—C5 | −1.8 (2) | C9—C8—C13—C12 | −54.65 (17) |
| N2—C3—C4—C5 | 176.03 (13) | C11—C12—C13—C8 | 55.91 (18) |
| C3—C4—C5—C6 | −1.2 (2) | C7—N3—C14—C19 | 113.34 (15) |
| C3—C4—C5—C7 | −171.14 (13) | C8—N3—C14—C19 | −66.48 (16) |
| C2—C1—C6—C5 | −2.6 (2) | C7—N3—C14—C15 | −121.37 (14) |
| N1—C1—C6—C5 | 177.76 (13) | C8—N3—C14—C15 | 58.81 (16) |
| C4—C5—C6—C1 | 3.3 (2) | N3—C14—C15—C16 | 177.61 (12) |
| C7—C5—C6—C1 | 173.39 (13) | C19—C14—C15—C16 | −56.51 (16) |
| C14—N3—C7—O5 | 168.10 (14) | C14—C15—C16—C17 | 54.76 (16) |
| C8—N3—C7—O5 | −12.1 (2) | C15—C16—C17—C18 | −54.88 (17) |
| C14—N3—C7—C5 | −14.2 (2) | C16—C17—C18—C19 | 56.63 (18) |
| C8—N3—C7—C5 | 165.61 (13) | N3—C14—C19—C18 | −176.37 (11) |
| C6—C5—C7—O5 | −57.32 (19) | C15—C14—C19—C18 | 58.03 (15) |
| C4—C5—C7—O5 | 112.77 (16) | C17—C18—C19—C14 | −58.10 (17) |
| H··· | ||||
| C9—H9 | 0.99 | 2.46 | 3.050 (2) | 118 |
| C13—H13 | 0.99 | 2.40 | 3.0043 (18) | 119 |
| C4—H4 | 0.95 | 2.56 | 3.418 (2) | 151 |
| C16—H16 | 0.99 | 2.58 | 3.468 (2) | 149 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C4—H4 | 0.95 | 2.56 | 3.418 (2) | 151 |
| C16—H16 | 0.99 | 2.58 | 3.468 (2) | 149 |
Symmetry codes: (i) ; (ii) .