Literature DB >> 23125701

(E)-1-[4-(Hex-yloxy)phen-yl]-3-(2-hy-droxy-phen-yl)prop-2-en-1-one.

Siti Muhaini Haris Fadzillah1, Zainab Ngaini, Hasnain Hussain, Ibrahim Abdul Razak, Safra Izuani Jama Asik.   

Abstract

In the title compound, C(21)H(24)O(3), the enone moiety adopts an s-cis conformation and the dihedral angle between the benzene rings is 12.89 (6)°. The hex-yloxy tail adopts an extended conformation. In the crystal, inversion dimers are linked by pairs of O-H⋯O hydrogen bonds and pairs of C-H⋯O inter-actions, forming two R(2) (2)(7) and one R(2) (2)(10) loops. The dimers are then arranged into sheets lying parallel to (201) and weak C-H⋯π inter-actions consolidate the packing.

Entities:  

Year:  2012        PMID: 23125701      PMCID: PMC3470257          DOI: 10.1107/S1600536812038007

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure and background to the biological properties of chalcones, see: Ngaini et al. (2011 ▶). For related structures, see: Razak et al. (2009 ▶); Ngaini et al. (2010 ▶). For graph-set theory, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986) ▶.

Experimental

Crystal data

C21H24O3 M = 324.40 Triclinic, a = 7.485 (2) Å b = 10.834 (3) Å c = 11.673 (3) Å α = 73.858 (5)° β = 77.961 (6)° γ = 76.941 (6)° V = 874.9 (4) Å3 Z = 2 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.47 × 0.14 × 0.12 mm

Data collection

Bruker APEX DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.963, T max = 0.991 17565 measured reflections 4576 independent reflections 3781 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.133 S = 1.02 4576 reflections 222 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.39 e Å−3 Δρmin = −0.23 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812038007/hb6948sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812038007/hb6948Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812038007/hb6948Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H24O3Z = 2
Mr = 324.40F(000) = 348
Triclinic, P1Dx = 1.231 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.485 (2) ÅCell parameters from 6758 reflections
b = 10.834 (3) Åθ = 2.4–31.7°
c = 11.673 (3) ŵ = 0.08 mm1
α = 73.858 (5)°T = 100 K
β = 77.961 (6)°Block, yellow
γ = 76.941 (6)°0.47 × 0.14 × 0.12 mm
V = 874.9 (4) Å3
Bruker APEX DUO CCD diffractometer4576 independent reflections
Radiation source: fine-focus sealed tube3781 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.026
φ and ω scansθmax = 29.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→10
Tmin = 0.963, Tmax = 0.991k = −14→14
17565 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.133H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.077P)2 + 0.2082P] where P = (Fo2 + 2Fc2)/3
4576 reflections(Δ/σ)max < 0.001
222 parametersΔρmax = 0.39 e Å3
0 restraintsΔρmin = −0.23 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.10199 (12)0.82681 (7)0.77465 (7)0.02537 (19)
O20.05000 (12)1.13926 (7)1.00412 (7)0.02580 (19)
O30.26974 (11)0.74559 (8)0.24879 (7)0.02478 (19)
C10.23994 (15)1.29725 (10)0.70042 (10)0.0229 (2)
H1A0.28481.27730.62600.027*
C20.24424 (16)1.41983 (11)0.71304 (11)0.0261 (2)
H2A0.29221.48120.64770.031*
C30.17661 (16)1.45074 (10)0.82374 (11)0.0256 (2)
H3A0.17631.53380.83180.031*
C40.10963 (15)1.35851 (10)0.92229 (10)0.0232 (2)
H4A0.06551.37940.99640.028*
C50.10858 (14)1.23422 (10)0.91002 (10)0.0198 (2)
C60.16962 (14)1.20282 (10)0.79729 (10)0.0194 (2)
C70.15502 (14)1.07449 (10)0.78689 (10)0.0205 (2)
H7A0.12111.01450.85810.025*
C80.18600 (15)1.03496 (10)0.68408 (10)0.0226 (2)
H8A0.22661.09120.61190.027*
C90.15789 (14)0.90539 (10)0.68181 (10)0.0201 (2)
C100.19366 (14)0.86986 (10)0.56431 (10)0.0199 (2)
C110.14263 (15)0.75378 (10)0.56113 (10)0.0223 (2)
H11A0.08960.70180.63200.027*
C120.17005 (15)0.71606 (11)0.45458 (10)0.0239 (2)
H12A0.13490.63920.45410.029*
C130.25034 (14)0.79245 (10)0.34708 (10)0.0213 (2)
C140.30205 (15)0.90824 (11)0.34783 (10)0.0235 (2)
H14A0.35500.96000.27670.028*
C150.27332 (15)0.94525 (10)0.45625 (10)0.0232 (2)
H15A0.30821.02220.45670.028*
C160.35636 (15)0.81399 (11)0.13354 (10)0.0226 (2)
H16A0.46990.83760.14150.027*
H16B0.27340.89290.10060.027*
C170.39770 (15)0.72005 (10)0.05308 (10)0.0225 (2)
H17A0.28200.69850.04640.027*
H17B0.47420.64000.09070.027*
C180.49635 (15)0.77343 (11)−0.07282 (10)0.0227 (2)
H18A0.60550.8039−0.06670.027*
H18B0.41440.8473−0.11470.027*
C190.55427 (16)0.66941 (11)−0.14528 (10)0.0243 (2)
H19A0.63620.5961−0.10270.029*
H19B0.44460.6381−0.14910.029*
C200.65178 (16)0.71628 (12)−0.27296 (10)0.0275 (2)
H20A0.75970.7501−0.26990.033*
H20B0.56850.7871−0.31710.033*
C210.7131 (2)0.60782 (14)−0.34014 (12)0.0375 (3)
H21A0.78170.6400−0.41800.056*
H21B0.60580.5795−0.35000.056*
H21C0.79040.5356−0.29470.056*
H1O20.001 (3)1.1676 (18)1.0758 (18)0.058 (5)*
U11U22U33U12U13U23
O10.0357 (4)0.0204 (4)0.0196 (4)−0.0082 (3)−0.0005 (3)−0.0046 (3)
O20.0370 (4)0.0201 (4)0.0197 (4)−0.0094 (3)0.0018 (3)−0.0052 (3)
O30.0294 (4)0.0283 (4)0.0181 (4)−0.0101 (3)0.0017 (3)−0.0081 (3)
C10.0254 (5)0.0209 (5)0.0214 (5)−0.0045 (4)−0.0036 (4)−0.0033 (4)
C20.0300 (5)0.0200 (5)0.0266 (6)−0.0080 (4)−0.0036 (4)−0.0009 (4)
C30.0291 (5)0.0180 (5)0.0315 (6)−0.0062 (4)−0.0065 (4)−0.0058 (4)
C40.0258 (5)0.0209 (5)0.0252 (6)−0.0040 (4)−0.0051 (4)−0.0084 (4)
C50.0207 (5)0.0183 (5)0.0203 (5)−0.0048 (4)−0.0036 (4)−0.0032 (4)
C60.0200 (4)0.0173 (4)0.0211 (5)−0.0030 (4)−0.0041 (4)−0.0043 (4)
C70.0226 (5)0.0164 (4)0.0220 (5)−0.0038 (4)−0.0032 (4)−0.0038 (4)
C80.0285 (5)0.0184 (5)0.0205 (5)−0.0052 (4)−0.0037 (4)−0.0035 (4)
C90.0214 (5)0.0184 (5)0.0198 (5)−0.0023 (4)−0.0028 (4)−0.0048 (4)
C100.0214 (5)0.0179 (5)0.0197 (5)−0.0018 (4)−0.0027 (4)−0.0051 (4)
C110.0267 (5)0.0193 (5)0.0193 (5)−0.0054 (4)−0.0006 (4)−0.0035 (4)
C120.0274 (5)0.0218 (5)0.0239 (6)−0.0078 (4)−0.0007 (4)−0.0074 (4)
C130.0209 (5)0.0234 (5)0.0197 (5)−0.0022 (4)−0.0028 (4)−0.0073 (4)
C140.0279 (5)0.0222 (5)0.0194 (5)−0.0076 (4)0.0000 (4)−0.0036 (4)
C150.0276 (5)0.0201 (5)0.0220 (5)−0.0073 (4)−0.0013 (4)−0.0051 (4)
C160.0236 (5)0.0263 (5)0.0168 (5)−0.0056 (4)−0.0002 (4)−0.0047 (4)
C170.0227 (5)0.0238 (5)0.0205 (5)−0.0028 (4)−0.0022 (4)−0.0064 (4)
C180.0241 (5)0.0233 (5)0.0198 (5)−0.0029 (4)−0.0039 (4)−0.0044 (4)
C190.0287 (5)0.0251 (5)0.0192 (5)−0.0080 (4)−0.0010 (4)−0.0052 (4)
C200.0303 (6)0.0317 (6)0.0202 (5)−0.0099 (5)−0.0004 (4)−0.0049 (4)
C210.0431 (7)0.0501 (8)0.0255 (6)−0.0195 (6)0.0053 (5)−0.0180 (6)
O1—C91.2382 (13)C12—C131.3976 (15)
O2—C51.3534 (13)C12—H12A0.9300
O2—H1O20.94 (2)C13—C141.3967 (15)
O3—C131.3477 (13)C14—C151.3922 (15)
O3—C161.4416 (13)C14—H14A0.9300
C1—C21.3844 (15)C15—H15A0.9300
C1—C61.3978 (15)C16—C171.5106 (15)
C1—H1A0.9300C16—H16A0.9700
C2—C31.3891 (17)C16—H16B0.9700
C2—H2A0.9300C17—C181.5189 (16)
C3—C41.3856 (16)C17—H17A0.9700
C3—H3A0.9300C17—H17B0.9700
C4—C51.3951 (14)C18—C191.5263 (15)
C4—H4A0.9300C18—H18A0.9700
C5—C61.4086 (15)C18—H18B0.9700
C6—C71.4587 (14)C19—C201.5181 (16)
C7—C81.3424 (15)C19—H19A0.9700
C7—H7A0.9300C19—H19B0.9700
C8—C91.4738 (14)C20—C211.5247 (17)
C8—H8A0.9300C20—H20A0.9700
C9—C101.4815 (15)C20—H20B0.9700
C10—C151.3953 (15)C21—H21A0.9600
C10—C111.4064 (14)C21—H21B0.9600
C11—C121.3763 (15)C21—H21C0.9600
C11—H11A0.9300
C5—O2—H1O2113.6 (11)C15—C14—H14A120.4
C13—O3—C16119.91 (8)C13—C14—H14A120.4
C2—C1—C6121.38 (11)C14—C15—C10121.74 (10)
C2—C1—H1A119.3C14—C15—H15A119.1
C6—C1—H1A119.3C10—C15—H15A119.1
C1—C2—C3119.72 (10)O3—C16—C17105.61 (9)
C1—C2—H2A120.1O3—C16—H16A110.6
C3—C2—H2A120.1C17—C16—H16A110.6
C4—C3—C2120.39 (10)O3—C16—H16B110.6
C4—C3—H3A119.8C17—C16—H16B110.6
C2—C3—H3A119.8H16A—C16—H16B108.7
C3—C4—C5119.82 (10)C16—C17—C18113.53 (9)
C3—C4—H4A120.1C16—C17—H17A108.9
C5—C4—H4A120.1C18—C17—H17A108.9
O2—C5—C4122.26 (10)C16—C17—H17B108.9
O2—C5—C6117.18 (9)C18—C17—H17B108.9
C4—C5—C6120.56 (10)H17A—C17—H17B107.7
C1—C6—C5118.05 (9)C17—C18—C19111.28 (9)
C1—C6—C7123.26 (10)C17—C18—H18A109.4
C5—C6—C7118.68 (9)C19—C18—H18A109.4
C8—C7—C6126.09 (10)C17—C18—H18B109.4
C8—C7—H7A117.0C19—C18—H18B109.4
C6—C7—H7A117.0H18A—C18—H18B108.0
C7—C8—C9122.19 (10)C20—C19—C18114.28 (9)
C7—C8—H8A118.9C20—C19—H19A108.7
C9—C8—H8A118.9C18—C19—H19A108.7
O1—C9—C8121.95 (10)C20—C19—H19B108.7
O1—C9—C10119.27 (9)C18—C19—H19B108.7
C8—C9—C10118.76 (9)H19A—C19—H19B107.6
C15—C10—C11117.94 (10)C19—C20—C21112.35 (10)
C15—C10—C9123.98 (9)C19—C20—H20A109.1
C11—C10—C9118.07 (9)C21—C20—H20A109.1
C12—C11—C10120.94 (10)C19—C20—H20B109.1
C12—C11—H11A119.5C21—C20—H20B109.1
C10—C11—H11A119.5H20A—C20—H20B107.9
C11—C12—C13120.47 (10)C20—C21—H21A109.5
C11—C12—H12A119.8C20—C21—H21B109.5
C13—C12—H12A119.8H21A—C21—H21B109.5
O3—C13—C14125.30 (10)C20—C21—H21C109.5
O3—C13—C12115.01 (9)H21A—C21—H21C109.5
C14—C13—C12119.69 (10)H21B—C21—H21C109.5
C15—C14—C13119.22 (10)
C6—C1—C2—C3−0.37 (17)C8—C9—C10—C11−171.57 (9)
C1—C2—C3—C41.75 (17)C15—C10—C11—C12−0.18 (16)
C2—C3—C4—C5−0.56 (16)C9—C10—C11—C12179.21 (9)
C3—C4—C5—O2177.95 (9)C10—C11—C12—C130.31 (17)
C3—C4—C5—C6−2.02 (16)C16—O3—C13—C142.51 (16)
C2—C1—C6—C5−2.13 (16)C16—O3—C13—C12−178.00 (9)
C2—C1—C6—C7177.29 (10)C11—C12—C13—O3−179.89 (9)
O2—C5—C6—C1−176.65 (9)C11—C12—C13—C14−0.37 (16)
C4—C5—C6—C13.32 (15)O3—C13—C14—C15179.78 (10)
O2—C5—C6—C73.90 (14)C12—C13—C14—C150.31 (16)
C4—C5—C6—C7−176.13 (9)C13—C14—C15—C10−0.19 (17)
C1—C6—C7—C8−7.76 (17)C11—C10—C15—C140.12 (16)
C5—C6—C7—C8171.66 (10)C9—C10—C15—C14−179.23 (10)
C6—C7—C8—C9−176.61 (9)C13—O3—C16—C17166.42 (9)
C7—C8—C9—O10.88 (17)O3—C16—C17—C18−178.07 (8)
C7—C8—C9—C10179.45 (10)C16—C17—C18—C19173.51 (9)
O1—C9—C10—C15−173.62 (10)C17—C18—C19—C20179.26 (9)
C8—C9—C10—C157.77 (15)C18—C19—C20—C21177.93 (10)
O1—C9—C10—C117.04 (15)
D—H···AD—HH···AD···AD—H···A
O2—H1O2···O1i0.94 (2)1.78 (2)2.6862 (15)163.3 (19)
C7—H7A···O2i0.932.373.2526 (18)158
C16—H16A···Cg1ii0.972.913.6117 (16)130
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H1O2⋯O1i 0.94 (2)1.78 (2)2.6862 (15)163.3 (19)
C7—H7A⋯O2i 0.932.373.2526 (18)158
C16—H16ACg1ii 0.972.913.6117 (16)130

Symmetry codes: (i) ; (ii) .

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