Literature DB >> 23125654

6-Bromo-4-[2-(4-fluoro-benzyl-idene)hydrazin-1-yl-idene]-1-methyl-3,4-dihydro-1H-2λ(6),1-benzothia-zine-2,2-dione.

Muhammad Shafiq1, Islam Ullah Khan, William T A Harrison, Ajaz Hussain, Hina Ashraf.   

Abstract

In the title compound, C(16)H(13)BrFN(3)O(2)S, the dihedral angle between the aromatic rings is 2.55 (19)° and the C=N-N=C torsion angle is 178.9 (3)°. The conformation of the thia-zine ring is an envelope, with the S atom displaced by -0.811 (3) Å from the mean plane of the other five atoms (r.m.s. deviation = 0.042 Å). In the crystal, C-H⋯O inter-actions link the mol-ecules and weak aromatic π-π stacking between the fluoro-benzene and bromo-benzene rings [centroid-centroid separation = 3.720 (2) Å and inter-planar angle = 2.6 (2)°] is also observed.

Entities:  

Year:  2012        PMID: 23125654      PMCID: PMC3470210          DOI: 10.1107/S1600536812037403

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and for the biological activity of related materials, see: Shafiq, Zia-Ur-Rehman et al. (2011 ▶). For a related structure, see: Shafiq, Khan et al. (2011 ▶)

Experimental

Crystal data

C16H13BrFN3O2S M = 410.26 Triclinic, a = 7.8996 (4) Å b = 9.0070 (4) Å c = 13.5057 (7) Å α = 104.176 (3)° β = 90.977 (3)° γ = 113.466 (3)° V = 847.51 (7) Å3 Z = 2 Mo Kα radiation μ = 2.57 mm−1 T = 296 K 0.37 × 0.16 × 0.14 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.450, T max = 0.715 17622 measured reflections 4186 independent reflections 2331 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.118 S = 0.99 4186 reflections 218 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.78 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812037403/kj2209sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812037403/kj2209Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812037403/kj2209Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H13BrFN3O2SZ = 2
Mr = 410.26F(000) = 412
Triclinic, P1Dx = 1.608 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.8996 (4) ÅCell parameters from 4416 reflections
b = 9.0070 (4) Åθ = 2.6–22.8°
c = 13.5057 (7) ŵ = 2.57 mm1
α = 104.176 (3)°T = 296 K
β = 90.977 (3)°Needle, yellow
γ = 113.466 (3)°0.37 × 0.16 × 0.14 mm
V = 847.51 (7) Å3
Bruker APEXII CCD diffractometer4186 independent reflections
Radiation source: fine-focus sealed tube2331 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.038
ω scansθmax = 28.3°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −10→10
Tmin = 0.450, Tmax = 0.715k = −12→12
17622 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.118H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0479P)2 + 0.5245P] where P = (Fo2 + 2Fc2)/3
4186 reflections(Δ/σ)max = 0.001
218 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.78 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.9739 (4)0.8291 (4)0.2392 (2)0.0408 (7)
C21.0591 (5)0.8914 (4)0.3410 (2)0.0515 (8)
H21.08040.81940.37340.062*
C31.1121 (5)1.0568 (4)0.3941 (2)0.0535 (9)
H31.17201.09730.46120.064*
C41.0757 (5)1.1622 (4)0.3472 (2)0.0512 (8)
C50.9894 (4)1.1042 (4)0.2476 (2)0.0432 (7)
H50.96541.17710.21720.052*
C60.9377 (4)0.9379 (3)0.1919 (2)0.0354 (6)
C70.8470 (4)0.8820 (3)0.0850 (2)0.0345 (6)
C80.8201 (5)0.7111 (3)0.0194 (2)0.0458 (8)
H8A0.93510.7173−0.00750.055*
H8B0.72480.6743−0.03840.055*
C90.6595 (4)1.0158 (4)−0.0800 (2)0.0379 (7)
H90.68181.1194−0.03440.045*
C100.5657 (4)0.9726 (4)−0.1840 (2)0.0409 (7)
C110.5109 (5)0.8138 (4)−0.2507 (2)0.0552 (9)
H110.53090.7307−0.22960.066*
C120.4260 (5)0.7788 (6)−0.3493 (3)0.0735 (12)
H120.38770.6722−0.39480.088*
C130.3996 (5)0.9026 (7)−0.3781 (3)0.0741 (13)
C140.4504 (5)1.0597 (6)−0.3152 (3)0.0725 (12)
H140.43001.1416−0.33770.087*
C150.5335 (5)1.0944 (5)−0.2165 (3)0.0564 (9)
H150.56821.2009−0.17130.068*
C160.9850 (6)0.5539 (5)0.2319 (3)0.0817 (13)
H16A1.11670.60670.25350.122*
H16B0.95310.44690.18270.122*
H16C0.92020.53780.29060.122*
S10.75433 (14)0.56638 (10)0.09239 (7)0.0548 (3)
N10.9317 (4)0.6609 (3)0.1849 (2)0.0542 (7)
N20.7961 (3)0.9817 (3)0.05209 (17)0.0383 (6)
N30.7109 (3)0.9153 (3)−0.05055 (17)0.0407 (6)
O10.7609 (4)0.4128 (3)0.0372 (2)0.0824 (9)
O20.5862 (3)0.5604 (3)0.1320 (2)0.0672 (7)
F10.3170 (4)0.8672 (4)−0.47568 (18)0.1185 (11)
Br11.14956 (8)1.39006 (5)0.42019 (3)0.0926 (2)
U11U22U33U12U13U23
C10.0408 (18)0.0441 (16)0.0416 (17)0.0197 (15)0.0030 (14)0.0151 (13)
C20.054 (2)0.064 (2)0.0436 (18)0.0272 (18)−0.0006 (15)0.0233 (16)
C30.057 (2)0.069 (2)0.0319 (17)0.0243 (18)−0.0045 (15)0.0115 (15)
C40.060 (2)0.0507 (18)0.0361 (17)0.0231 (17)−0.0059 (15)0.0009 (14)
C50.0503 (19)0.0433 (16)0.0337 (15)0.0197 (15)−0.0039 (14)0.0066 (13)
C60.0375 (17)0.0377 (14)0.0306 (14)0.0149 (13)0.0023 (12)0.0099 (12)
C70.0352 (16)0.0314 (13)0.0329 (15)0.0100 (13)0.0015 (12)0.0086 (11)
C80.056 (2)0.0360 (15)0.0395 (17)0.0171 (15)−0.0020 (15)0.0041 (13)
C90.0393 (17)0.0373 (15)0.0335 (15)0.0142 (13)0.0010 (13)0.0068 (12)
C100.0352 (17)0.0536 (18)0.0359 (16)0.0182 (15)0.0000 (13)0.0164 (13)
C110.056 (2)0.057 (2)0.0431 (19)0.0166 (18)−0.0090 (16)0.0091 (15)
C120.064 (3)0.089 (3)0.041 (2)0.015 (2)−0.0131 (18)0.004 (2)
C130.050 (2)0.129 (4)0.043 (2)0.031 (3)−0.0069 (17)0.034 (2)
C140.065 (3)0.116 (4)0.065 (3)0.050 (3)0.009 (2)0.052 (3)
C150.054 (2)0.075 (2)0.052 (2)0.0337 (19)0.0086 (17)0.0260 (18)
C160.102 (3)0.059 (2)0.096 (3)0.042 (2)−0.015 (3)0.030 (2)
S10.0655 (6)0.0316 (4)0.0608 (5)0.0150 (4)−0.0081 (4)0.0115 (4)
N10.0662 (19)0.0447 (15)0.0571 (17)0.0273 (14)−0.0093 (14)0.0170 (13)
N20.0437 (15)0.0375 (12)0.0291 (12)0.0151 (12)−0.0052 (10)0.0048 (10)
N30.0495 (15)0.0401 (13)0.0294 (12)0.0173 (12)−0.0045 (11)0.0070 (10)
O10.113 (2)0.0376 (13)0.090 (2)0.0338 (14)−0.0166 (17)0.0037 (12)
O20.0524 (16)0.0561 (15)0.0801 (18)0.0050 (12)0.0048 (13)0.0266 (13)
F10.0919 (18)0.199 (3)0.0528 (14)0.043 (2)−0.0233 (13)0.0460 (18)
Br10.1381 (5)0.0639 (3)0.0568 (3)0.0455 (3)−0.0405 (3)−0.01902 (18)
C1—C21.395 (4)C10—C111.381 (4)
C1—C61.405 (4)C10—C151.385 (4)
C1—N11.411 (4)C11—C121.384 (5)
C2—C31.370 (5)C11—H110.9300
C2—H20.9300C12—C131.355 (6)
C3—C41.375 (5)C12—H120.9300
C3—H30.9300C13—C141.354 (6)
C4—C51.373 (4)C13—F11.365 (4)
C4—Br11.887 (3)C14—C151.382 (5)
C5—C61.388 (4)C14—H140.9300
C5—H50.9300C15—H150.9300
C6—C71.475 (4)C16—N11.457 (4)
C7—N21.281 (3)C16—H16A0.9600
C7—C81.505 (4)C16—H16B0.9600
C8—S11.746 (3)C16—H16C0.9600
C8—H8A0.9700S1—O11.423 (3)
C8—H8B0.9700S1—O21.426 (3)
C9—N31.268 (3)S1—N11.649 (3)
C9—C101.463 (4)N2—N31.405 (3)
C9—H90.9300
C2—C1—C6118.9 (3)C10—C11—C12119.8 (3)
C2—C1—N1119.7 (3)C10—C11—H11120.1
C6—C1—N1121.3 (3)C12—C11—H11120.1
C3—C2—C1121.3 (3)C13—C12—C11118.8 (4)
C3—C2—H2119.4C13—C12—H12120.6
C1—C2—H2119.4C11—C12—H12120.6
C2—C3—C4119.4 (3)C14—C13—C12123.5 (3)
C2—C3—H3120.3C14—C13—F1118.2 (4)
C4—C3—H3120.3C12—C13—F1118.4 (4)
C5—C4—C3120.8 (3)C13—C14—C15117.8 (4)
C5—C4—Br1119.9 (2)C13—C14—H14121.1
C3—C4—Br1119.3 (2)C15—C14—H14121.1
C4—C5—C6120.7 (3)C14—C15—C10120.8 (4)
C4—C5—H5119.7C14—C15—H15119.6
C6—C5—H5119.7C10—C15—H15119.6
C5—C6—C1118.9 (3)N1—C16—H16A109.5
C5—C6—C7118.7 (2)N1—C16—H16B109.5
C1—C6—C7122.4 (2)H16A—C16—H16B109.5
N2—C7—C6118.5 (2)N1—C16—H16C109.5
N2—C7—C8123.1 (2)H16A—C16—H16C109.5
C6—C7—C8118.4 (2)H16B—C16—H16C109.5
C7—C8—S1110.0 (2)O1—S1—O2118.54 (17)
C7—C8—H8A109.7O1—S1—N1107.04 (16)
S1—C8—H8A109.7O2—S1—N1110.83 (16)
C7—C8—H8B109.7O1—S1—C8110.49 (17)
S1—C8—H8B109.7O2—S1—C8108.71 (16)
H8A—C8—H8B108.2N1—S1—C899.57 (14)
N3—C9—C10121.5 (3)C1—N1—C16120.7 (3)
N3—C9—H9119.2C1—N1—S1117.5 (2)
C10—C9—H9119.2C16—N1—S1117.2 (2)
C11—C10—C15119.4 (3)C7—N2—N3113.6 (2)
C11—C10—C9121.5 (3)C9—N3—N2111.9 (2)
C15—C10—C9119.1 (3)
C6—C1—C2—C3−1.7 (5)C11—C12—C13—C14−0.7 (6)
N1—C1—C2—C3176.1 (3)C11—C12—C13—F1179.5 (3)
C1—C2—C3—C41.9 (5)C12—C13—C14—C150.0 (6)
C2—C3—C4—C5−0.9 (5)F1—C13—C14—C15179.8 (3)
C2—C3—C4—Br1−179.8 (3)C13—C14—C15—C100.9 (6)
C3—C4—C5—C6−0.3 (5)C11—C10—C15—C14−1.2 (5)
Br1—C4—C5—C6178.6 (2)C9—C10—C15—C14178.1 (3)
C4—C5—C6—C10.4 (5)C7—C8—S1—O1−169.6 (2)
C4—C5—C6—C7−179.4 (3)C7—C8—S1—O258.7 (3)
C2—C1—C6—C50.6 (4)C7—C8—S1—N1−57.2 (2)
N1—C1—C6—C5−177.2 (3)C2—C1—N1—C16−3.3 (5)
C2—C1—C6—C7−179.6 (3)C6—C1—N1—C16174.5 (3)
N1—C1—C6—C72.6 (5)C2—C1—N1—S1152.0 (3)
C5—C6—C7—N2−9.5 (4)C6—C1—N1—S1−30.2 (4)
C1—C6—C7—N2170.6 (3)O1—S1—N1—C1169.3 (3)
C5—C6—C7—C8170.0 (3)O2—S1—N1—C1−60.1 (3)
C1—C6—C7—C8−9.8 (4)C8—S1—N1—C154.3 (3)
N2—C7—C8—S1−140.5 (3)O1—S1—N1—C16−34.5 (3)
C6—C7—C8—S140.0 (3)O2—S1—N1—C1696.1 (3)
N3—C9—C10—C117.3 (5)C8—S1—N1—C16−149.5 (3)
N3—C9—C10—C15−171.9 (3)C6—C7—N2—N3−179.8 (2)
C15—C10—C11—C120.5 (5)C8—C7—N2—N30.7 (4)
C9—C10—C11—C12−178.7 (3)C10—C9—N3—N2−179.4 (3)
C10—C11—C12—C130.4 (6)C7—N2—N3—C9178.9 (3)
D—H···AD—HH···AD···AD—H···A
C8—H8B···O2i0.972.563.397 (4)145
C9—H9···O1ii0.932.393.292 (4)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C8—H8B⋯O2i 0.972.563.397 (4)145
C9—H9⋯O1ii 0.932.393.292 (4)163

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  6-Bromo-1-methyl-4-[2-(4-methyl-benzyl-idene)hydrazinyl-idene]-3H-2λ,1-benzothia-zine-2,2-dione.

Authors:  Muhammad Shafiq; Islam Ullah Khan; Muhammad Zia-Ur-Rehman; Muhammad Nadeem Arshad; Abdullah M Asiri
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-07-23
  2 in total

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