| Literature DB >> 23125646 |
P Murali Krishna1, G N Anilkumar, K Hussain Reddy, M K Kokila.
Abstract
The title compound, C(11)H(13)N(3)S, is close to being planar, with a dihedral angle of 9.64 (3)° between the benzene ring and the thio-semicarbazone mean plane, maintained by the presence of π-conjugation in the chain linking the the two systems. In the crystal, N-H⋯S hydrogen bonds form centrosymmetric dimers through a cyclic association [graph-set R(2) (2)(8)].Entities:
Year: 2012 PMID: 23125646 PMCID: PMC3470202 DOI: 10.1107/S1600536812037397
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H13N3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 290 reflections |
| θ = 1.5–26.8° | |
| µ = 0.25 mm−1 | |
| β = 91.206 (3)° | Needle, pale yellow |
| 0.45 × 0.26 × 0.24 mm | |
| Bruker SMART CCD area-detector diffractometer | 1564 reflections with |
| Radiation source: fine-focus sealed tube | |
| Graphite monochromator | θmax = 25.5°, θmin = 1.8° |
| ψ and ω scans | |
| 8363 measured reflections | |
| 2201 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2201 reflections | (Δ/σ)max = 0.001 |
| 137 parameters | Δρmax = 0.38 e Å−3 |
| 0 restraints | Δρmin = −0.32 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | −0.18251 (17) | 0.19579 (9) | 1.02989 (4) | 0.0887 (4) | |
| N1 | 0.2855 (4) | 0.1898 (2) | 0.90259 (9) | 0.0638 (6) | |
| N2 | 0.1638 (4) | 0.1576 (3) | 0.95336 (10) | 0.0675 (6) | |
| H2 | 0.2067 | 0.086 | 0.9746 | 0.081* | |
| N3 | −0.0653 (4) | 0.3521 (3) | 0.93696 (10) | 0.0709 (7) | |
| H3 | 0.0296 | 0.3671 | 0.9079 | 0.085* | |
| C1 | 1.1293 (5) | −0.0205 (3) | 0.76071 (12) | 0.0668 (7) | |
| H1 | 1.1667 | −0.0888 | 0.7891 | 0.08* | |
| C2 | 1.2696 (5) | −0.0095 (4) | 0.71108 (13) | 0.0764 (8) | |
| H2A | 1.4009 | −0.0698 | 0.7066 | 0.092* | |
| C3 | 1.2180 (5) | 0.0884 (3) | 0.66856 (14) | 0.0753 (8) | |
| H3A | 1.3135 | 0.0957 | 0.6352 | 0.09* | |
| C4 | 1.0231 (6) | 0.1766 (3) | 0.67547 (14) | 0.0760 (8) | |
| H4 | 0.9867 | 0.2435 | 0.6464 | 0.091* | |
| C5 | 0.8811 (5) | 0.1673 (3) | 0.72468 (13) | 0.0685 (7) | |
| H5 | 0.7493 | 0.2275 | 0.7283 | 0.082* | |
| C6 | 0.9323 (4) | 0.0688 (3) | 0.76925 (11) | 0.0571 (6) | |
| C7 | 0.7899 (4) | 0.0553 (3) | 0.82258 (11) | 0.0616 (7) | |
| H7 | 0.8363 | −0.0157 | 0.849 | 0.074* | |
| C8 | 0.6004 (5) | 0.1334 (3) | 0.83780 (12) | 0.0626 (7) | |
| H8 | 0.5532 | 0.2071 | 0.8128 | 0.075* | |
| C9 | 0.4655 (5) | 0.1101 (3) | 0.89050 (11) | 0.0627 (7) | |
| H9 | 0.5088 | 0.0368 | 0.9161 | 0.075* | |
| C10 | −0.0242 (5) | 0.2395 (3) | 0.96975 (12) | 0.0621 (7) | |
| C11 | −0.2592 (6) | 0.4535 (4) | 0.94608 (16) | 0.0907 (10) | |
| H11A | −0.4034 | 0.422 | 0.9256 | 0.136* | |
| H11B | −0.2123 | 0.544 | 0.9309 | 0.136* | |
| H11C | −0.2896 | 0.4613 | 0.9877 | 0.136* |
| S1 | 0.1036 (7) | 0.0873 (6) | 0.0769 (6) | −0.0033 (5) | 0.0421 (5) | −0.0020 (4) |
| N1 | 0.0603 (13) | 0.0759 (15) | 0.0558 (13) | −0.0073 (11) | 0.0119 (10) | −0.0001 (11) |
| N2 | 0.0673 (14) | 0.0775 (15) | 0.0582 (13) | 0.0019 (12) | 0.0148 (11) | 0.0093 (11) |
| N3 | 0.0657 (14) | 0.0768 (15) | 0.0705 (14) | −0.0019 (12) | 0.0103 (11) | 0.0037 (12) |
| C1 | 0.0565 (15) | 0.0770 (18) | 0.0668 (17) | 0.0015 (13) | −0.0017 (13) | −0.0026 (14) |
| C2 | 0.0565 (16) | 0.095 (2) | 0.077 (2) | 0.0084 (15) | 0.0084 (14) | −0.0134 (17) |
| C3 | 0.0700 (18) | 0.085 (2) | 0.0713 (18) | −0.0077 (16) | 0.0201 (14) | −0.0150 (16) |
| C4 | 0.084 (2) | 0.0718 (19) | 0.0728 (19) | −0.0015 (16) | 0.0184 (15) | 0.0046 (14) |
| C5 | 0.0659 (16) | 0.0680 (17) | 0.0722 (18) | 0.0046 (13) | 0.0148 (13) | 0.0011 (14) |
| C6 | 0.0461 (13) | 0.0651 (15) | 0.0601 (15) | −0.0095 (12) | 0.0042 (11) | −0.0082 (12) |
| C7 | 0.0517 (14) | 0.0700 (16) | 0.0628 (15) | −0.0083 (12) | −0.0008 (12) | 0.0007 (13) |
| C8 | 0.0555 (15) | 0.0743 (17) | 0.0581 (15) | −0.0084 (13) | 0.0056 (12) | −0.0023 (13) |
| C9 | 0.0577 (15) | 0.0745 (18) | 0.0560 (15) | −0.0083 (14) | 0.0034 (12) | −0.0030 (13) |
| C10 | 0.0608 (15) | 0.0658 (16) | 0.0601 (16) | −0.0071 (13) | 0.0094 (12) | −0.0074 (13) |
| C11 | 0.076 (2) | 0.081 (2) | 0.115 (3) | 0.0053 (16) | 0.0029 (18) | 0.0001 (19) |
| S1—C10 | 1.680 (3) | C3—H3A | 0.93 |
| N1—C9 | 1.282 (3) | C4—C5 | 1.375 (4) |
| N1—N2 | 1.373 (3) | C4—H4 | 0.93 |
| N2—C10 | 1.354 (3) | C5—C6 | 1.395 (4) |
| N2—H2 | 0.86 | C5—H5 | 0.93 |
| N3—C10 | 1.314 (4) | C6—C7 | 1.456 (3) |
| N3—C11 | 1.456 (4) | C7—C8 | 1.333 (4) |
| N3—H3 | 0.86 | C7—H7 | 0.93 |
| C1—C2 | 1.378 (4) | C8—C9 | 1.432 (4) |
| C1—C6 | 1.394 (4) | C8—H8 | 0.93 |
| C1—H1 | 0.93 | C9—H9 | 0.93 |
| C2—C3 | 1.359 (4) | C11—H11A | 0.96 |
| C2—H2A | 0.93 | C11—H11B | 0.96 |
| C3—C4 | 1.374 (4) | C11—H11C | 0.96 |
| C9—N1—N2 | 116.3 (2) | C1—C6—C5 | 116.9 (2) |
| C10—N2—N1 | 119.5 (2) | C1—C6—C7 | 119.8 (2) |
| C10—N2—H2 | 120.2 | C5—C6—C7 | 123.2 (2) |
| N1—N2—H2 | 120.2 | C8—C7—C6 | 127.2 (3) |
| C10—N3—C11 | 125.0 (3) | C8—C7—H7 | 116.4 |
| C10—N3—H3 | 117.5 | C6—C7—H7 | 116.4 |
| C11—N3—H3 | 117.5 | C7—C8—C9 | 123.6 (3) |
| C2—C1—C6 | 121.4 (3) | C7—C8—H8 | 118.2 |
| C2—C1—H1 | 119.3 | C9—C8—H8 | 118.2 |
| C6—C1—H1 | 119.3 | N1—C9—C8 | 120.3 (3) |
| C3—C2—C1 | 120.7 (3) | N1—C9—H9 | 119.8 |
| C3—C2—H2A | 119.7 | C8—C9—H9 | 119.8 |
| C1—C2—H2A | 119.7 | N3—C10—N2 | 115.8 (2) |
| C2—C3—C4 | 119.2 (3) | N3—C10—S1 | 124.5 (2) |
| C2—C3—H3A | 120.4 | N2—C10—S1 | 119.7 (2) |
| C4—C3—H3A | 120.4 | N3—C11—H11A | 109.5 |
| C5—C4—C3 | 121.0 (3) | N3—C11—H11B | 109.5 |
| C5—C4—H4 | 119.5 | H11A—C11—H11B | 109.5 |
| C3—C4—H4 | 119.5 | N3—C11—H11C | 109.5 |
| C4—C5—C6 | 120.9 (3) | H11A—C11—H11C | 109.5 |
| C4—C5—H5 | 119.6 | H11B—C11—H11C | 109.5 |
| C6—C5—H5 | 119.6 | ||
| C9—N1—N2—C10 | 178.3 (2) | C1—C6—C7—C8 | 178.7 (2) |
| C6—C1—C2—C3 | −0.6 (4) | C5—C6—C7—C8 | −1.9 (4) |
| C1—C2—C3—C4 | −0.2 (4) | C6—C7—C8—C9 | 178.0 (2) |
| C2—C3—C4—C5 | 0.3 (5) | N2—N1—C9—C8 | 178.6 (2) |
| C3—C4—C5—C6 | 0.5 (5) | C7—C8—C9—N1 | 179.7 (2) |
| C2—C1—C6—C5 | 1.4 (4) | C11—N3—C10—N2 | 179.2 (3) |
| C2—C1—C6—C7 | −179.2 (2) | C11—N3—C10—S1 | −2.5 (4) |
| C4—C5—C6—C1 | −1.3 (4) | N1—N2—C10—N3 | −4.7 (4) |
| C4—C5—C6—C7 | 179.3 (3) | N1—N2—C10—S1 | 176.89 (18) |
| H··· | ||||
| N2—H2···S1i | 0.86 | 2.67 | 3.368 (3) | 139 |
| N3—H3···N1 | 0.86 | 2.20 | 2.604 (6) | 109 |
| C11—H11 | 0.96 | 2.75 | 3.108 (6) | 103 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2⋯S1i | 0.86 | 2.67 | 3.368 (3) | 139 |
Symmetry code: (i) .