Literature DB >> 23125646

(2E)-N-Methyl-2-[(2E)-3-phenyl-prop-2-en-1-yl-idene]hydrazinecarbothio-amide.

P Murali Krishna1, G N Anilkumar, K Hussain Reddy, M K Kokila.   

Abstract

The title compound, C(11)H(13)N(3)S, is close to being planar, with a dihedral angle of 9.64 (3)° between the benzene ring and the thio-semicarbazone mean plane, maintained by the presence of π-conjugation in the chain linking the the two systems. In the crystal, N-H⋯S hydrogen bonds form centrosymmetric dimers through a cyclic association [graph-set R(2) (2)(8)].

Entities:  

Year:  2012        PMID: 23125646      PMCID: PMC3470202          DOI: 10.1107/S1600536812037397

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity and pharmaceutical properties of thio­semicarbazones and their derivatives, see: Casas et al. (2000 ▶); Ferrari et al. (2000 ▶); Murali Krishna et al. (2008 ▶); Murali Krishna & Hussain Reddy (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related compounds, see: Chumakov et al. (2006 ▶).

Experimental

Crystal data

C11H13N3S M = 219.31 Monoclinic, a = 5.5265 (11) Å b = 9.4670 (19) Å c = 22.534 (5) Å β = 91.206 (3)° V = 1178.7 (4) Å3 Z = 4 Mo Kα radiation μ = 0.25 mm−1 T = 291 K 0.45 × 0.26 × 0.24 mm

Data collection

Bruker SMART CCD area-detector diffractometer 8363 measured reflections 2201 independent reflections 1564 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.059 wR(F 2) = 0.174 S = 1.06 2201 reflections 137 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.32 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1993 ▶); software used to prepare material for publication: PARST (Nardelli, 1995 ▶) and WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812037397/zs2229sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812037397/zs2229Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812037397/zs2229Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13N3SF(000) = 464
Mr = 219.31Dx = 1.236 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 290 reflections
a = 5.5265 (11) Åθ = 1.5–26.8°
b = 9.4670 (19) ŵ = 0.25 mm1
c = 22.534 (5) ÅT = 291 K
β = 91.206 (3)°Needle, pale yellow
V = 1178.7 (4) Å30.45 × 0.26 × 0.24 mm
Z = 4
Bruker SMART CCD area-detector diffractometer1564 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.031
Graphite monochromatorθmax = 25.5°, θmin = 1.8°
ψ and ω scansh = −6→6
8363 measured reflectionsk = −11→11
2201 independent reflectionsl = −27→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.059Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.174H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0883P)2 + 0.2979P] where P = (Fo2 + 2Fc2)/3
2201 reflections(Δ/σ)max = 0.001
137 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.32 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.18251 (17)0.19579 (9)1.02989 (4)0.0887 (4)
N10.2855 (4)0.1898 (2)0.90259 (9)0.0638 (6)
N20.1638 (4)0.1576 (3)0.95336 (10)0.0675 (6)
H20.20670.0860.97460.081*
N3−0.0653 (4)0.3521 (3)0.93696 (10)0.0709 (7)
H30.02960.36710.90790.085*
C11.1293 (5)−0.0205 (3)0.76071 (12)0.0668 (7)
H11.1667−0.08880.78910.08*
C21.2696 (5)−0.0095 (4)0.71108 (13)0.0764 (8)
H2A1.4009−0.06980.70660.092*
C31.2180 (5)0.0884 (3)0.66856 (14)0.0753 (8)
H3A1.31350.09570.63520.09*
C41.0231 (6)0.1766 (3)0.67547 (14)0.0760 (8)
H40.98670.24350.64640.091*
C50.8811 (5)0.1673 (3)0.72468 (13)0.0685 (7)
H50.74930.22750.72830.082*
C60.9323 (4)0.0688 (3)0.76925 (11)0.0571 (6)
C70.7899 (4)0.0553 (3)0.82258 (11)0.0616 (7)
H70.8363−0.01570.8490.074*
C80.6004 (5)0.1334 (3)0.83780 (12)0.0626 (7)
H80.55320.20710.81280.075*
C90.4655 (5)0.1101 (3)0.89050 (11)0.0627 (7)
H90.50880.03680.91610.075*
C10−0.0242 (5)0.2395 (3)0.96975 (12)0.0621 (7)
C11−0.2592 (6)0.4535 (4)0.94608 (16)0.0907 (10)
H11A−0.40340.4220.92560.136*
H11B−0.21230.5440.93090.136*
H11C−0.28960.46130.98770.136*
U11U22U33U12U13U23
S10.1036 (7)0.0873 (6)0.0769 (6)−0.0033 (5)0.0421 (5)−0.0020 (4)
N10.0603 (13)0.0759 (15)0.0558 (13)−0.0073 (11)0.0119 (10)−0.0001 (11)
N20.0673 (14)0.0775 (15)0.0582 (13)0.0019 (12)0.0148 (11)0.0093 (11)
N30.0657 (14)0.0768 (15)0.0705 (14)−0.0019 (12)0.0103 (11)0.0037 (12)
C10.0565 (15)0.0770 (18)0.0668 (17)0.0015 (13)−0.0017 (13)−0.0026 (14)
C20.0565 (16)0.095 (2)0.077 (2)0.0084 (15)0.0084 (14)−0.0134 (17)
C30.0700 (18)0.085 (2)0.0713 (18)−0.0077 (16)0.0201 (14)−0.0150 (16)
C40.084 (2)0.0718 (19)0.0728 (19)−0.0015 (16)0.0184 (15)0.0046 (14)
C50.0659 (16)0.0680 (17)0.0722 (18)0.0046 (13)0.0148 (13)0.0011 (14)
C60.0461 (13)0.0651 (15)0.0601 (15)−0.0095 (12)0.0042 (11)−0.0082 (12)
C70.0517 (14)0.0700 (16)0.0628 (15)−0.0083 (12)−0.0008 (12)0.0007 (13)
C80.0555 (15)0.0743 (17)0.0581 (15)−0.0084 (13)0.0056 (12)−0.0023 (13)
C90.0577 (15)0.0745 (18)0.0560 (15)−0.0083 (14)0.0034 (12)−0.0030 (13)
C100.0608 (15)0.0658 (16)0.0601 (16)−0.0071 (13)0.0094 (12)−0.0074 (13)
C110.076 (2)0.081 (2)0.115 (3)0.0053 (16)0.0029 (18)0.0001 (19)
S1—C101.680 (3)C3—H3A0.93
N1—C91.282 (3)C4—C51.375 (4)
N1—N21.373 (3)C4—H40.93
N2—C101.354 (3)C5—C61.395 (4)
N2—H20.86C5—H50.93
N3—C101.314 (4)C6—C71.456 (3)
N3—C111.456 (4)C7—C81.333 (4)
N3—H30.86C7—H70.93
C1—C21.378 (4)C8—C91.432 (4)
C1—C61.394 (4)C8—H80.93
C1—H10.93C9—H90.93
C2—C31.359 (4)C11—H11A0.96
C2—H2A0.93C11—H11B0.96
C3—C41.374 (4)C11—H11C0.96
C9—N1—N2116.3 (2)C1—C6—C5116.9 (2)
C10—N2—N1119.5 (2)C1—C6—C7119.8 (2)
C10—N2—H2120.2C5—C6—C7123.2 (2)
N1—N2—H2120.2C8—C7—C6127.2 (3)
C10—N3—C11125.0 (3)C8—C7—H7116.4
C10—N3—H3117.5C6—C7—H7116.4
C11—N3—H3117.5C7—C8—C9123.6 (3)
C2—C1—C6121.4 (3)C7—C8—H8118.2
C2—C1—H1119.3C9—C8—H8118.2
C6—C1—H1119.3N1—C9—C8120.3 (3)
C3—C2—C1120.7 (3)N1—C9—H9119.8
C3—C2—H2A119.7C8—C9—H9119.8
C1—C2—H2A119.7N3—C10—N2115.8 (2)
C2—C3—C4119.2 (3)N3—C10—S1124.5 (2)
C2—C3—H3A120.4N2—C10—S1119.7 (2)
C4—C3—H3A120.4N3—C11—H11A109.5
C5—C4—C3121.0 (3)N3—C11—H11B109.5
C5—C4—H4119.5H11A—C11—H11B109.5
C3—C4—H4119.5N3—C11—H11C109.5
C4—C5—C6120.9 (3)H11A—C11—H11C109.5
C4—C5—H5119.6H11B—C11—H11C109.5
C6—C5—H5119.6
C9—N1—N2—C10178.3 (2)C1—C6—C7—C8178.7 (2)
C6—C1—C2—C3−0.6 (4)C5—C6—C7—C8−1.9 (4)
C1—C2—C3—C4−0.2 (4)C6—C7—C8—C9178.0 (2)
C2—C3—C4—C50.3 (5)N2—N1—C9—C8178.6 (2)
C3—C4—C5—C60.5 (5)C7—C8—C9—N1179.7 (2)
C2—C1—C6—C51.4 (4)C11—N3—C10—N2179.2 (3)
C2—C1—C6—C7−179.2 (2)C11—N3—C10—S1−2.5 (4)
C4—C5—C6—C1−1.3 (4)N1—N2—C10—N3−4.7 (4)
C4—C5—C6—C7179.3 (3)N1—N2—C10—S1176.89 (18)
D—H···AD—HH···AD···AD—H···A
N2—H2···S1i0.862.673.368 (3)139
N3—H3···N10.862.202.604 (6)109
C11—H11C···S10.962.753.108 (6)103
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H2⋯S1i 0.862.673.368 (3)139

Symmetry code: (i) .

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