| Literature DB >> 23125605 |
Chang-Xin Bian1, Xiao-Qiang Yao, Yu-Min Song.
Abstract
In the title compound, [Ni(C(4)H(2)O(4))(C(12)H(10)N(4))(H(2)O)(2)](n), the Ni(II) ion has a distorted octa-hedral coordination geometry. The asymmetric unit is composed of an Ni(2+) ion, located on a twofold rotation axis, one half of a 1,4-bis-(1H-imidazol-1-yl)benzene (BIMB) ligand and one half of a fumarte (fum(2-)) dianion, both ligands being located about inversion centers, and a coordinating water mol-ecule. The Ni(II) ions are linked by two BIMB ligands and two fum(2-) dianions, forming a four-connected layered structure parallel to (010) with a 4(4)-sql topology. Within each layer, there are rhombic grids with dimensions of ca 13.5 × 9.0 Å and approximate angles of 109 and 70°. The crystal packing features a two-dimensional → two-dimensional parallel/parallel interpenetration in which one undulating layer is catenated to another equivalent one, forming a new bilayer. Moreover, the entangled two-dimensional layers are connected by O-H⋯O and C-H⋯O hydrogen bonds, generating a three-dimensional structure.Entities:
Year: 2012 PMID: 23125605 PMCID: PMC3470161 DOI: 10.1107/S1600536812038895
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C4H2O4)(C12H10N4)(H2O)2] | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2n 2ab | Cell parameters from 4217 reflections |
| θ = 2.5–28.4° | |
| µ = 1.21 mm−1 | |
| Block, green | |
| 0.23 × 0.22 × 0.20 mm |
| Bruke APEXII CCD area-dector diffractometer | 2108 independent reflections |
| Radiation source: fine-focus sealed tube | 1827 reflections with |
| Graphite monochromator | |
| CCD rotation images, thin slices scans | θmax = 28.5°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 8512 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2108 reflections | (Δ/σ)max < 0.001 |
| 123 parameters | Δρmax = 0.36 e Å−3 |
| 2 restraints | Δρmin = −0.48 e Å−3 |
| Experimental. Spectroscopic data for the title compound :IR (KBr, cm-1): 3380m, 3133m, 1564s, 1533s, 1385s, 1307w, 1269w, 1130w, 1195w, 1074m, 970w, 880w, 829m, 751m, 682w, 656w, 534w, 495w. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.85967 (16) | 0.48653 (12) | 0.8087 (2) | 0.0337 (4) | |
| H1 | 0.9127 | 0.5069 | 0.8785 | 0.040* | |
| C2 | 0.76108 (18) | 0.52549 (13) | 0.7609 (2) | 0.0353 (4) | |
| H2 | 0.7344 | 0.5768 | 0.7899 | 0.042* | |
| C3 | 0.77741 (16) | 0.40688 (11) | 0.6505 (2) | 0.0294 (4) | |
| H3 | 0.7616 | 0.3627 | 0.5889 | 0.035* | |
| C4 | 0.57558 (18) | 0.56487 (12) | 0.5293 (3) | 0.0409 (5) | |
| H4 | 0.6266 | 0.6082 | 0.5487 | 0.049* | |
| C5 | 0.60153 (15) | 0.48748 (11) | 0.5802 (2) | 0.0290 (4) | |
| C6 | 0.52718 (19) | 0.42289 (12) | 0.5509 (3) | 0.0408 (5) | |
| H6 | 0.5461 | 0.3709 | 0.5851 | 0.049* | |
| C7 | 1.08521 (15) | 0.29993 (11) | 0.43626 (19) | 0.0266 (3) | |
| C8 | 1.05530 (18) | 0.30159 (14) | 0.2748 (2) | 0.0348 (4) | |
| H8 | 1.1169 | 0.3027 | 0.2064 | 0.042* | |
| N1 | 0.86960 (13) | 0.41195 (10) | 0.73829 (16) | 0.0261 (3) | |
| N2 | 0.70833 (13) | 0.47384 (9) | 0.66080 (18) | 0.0288 (3) | |
| Ni1 | 1.0000 | 0.323481 (18) | 0.7500 | 0.01981 (12) | |
| O1 | 1.00329 (10) | 0.31848 (9) | 0.52371 (16) | 0.0310 (3) | |
| O2 | 1.18776 (11) | 0.27709 (9) | 0.47076 (14) | 0.0347 (3) | |
| O3 | 0.86671 (12) | 0.23178 (8) | 0.74938 (13) | 0.0291 (3) | |
| H3Y | 0.8214 | 0.2383 | 0.8237 | 0.044* | |
| H3X | 0.8264 | 0.2356 | 0.6701 | 0.044* |
| C1 | 0.0277 (8) | 0.0378 (10) | 0.0358 (10) | 0.0029 (7) | −0.0078 (8) | −0.0101 (8) |
| C2 | 0.0317 (9) | 0.0328 (9) | 0.0414 (11) | 0.0050 (8) | −0.0073 (8) | −0.0121 (8) |
| C3 | 0.0260 (8) | 0.0294 (9) | 0.0327 (9) | 0.0065 (7) | −0.0078 (7) | −0.0043 (7) |
| C4 | 0.0341 (10) | 0.0268 (9) | 0.0617 (14) | 0.0004 (7) | −0.0200 (10) | −0.0014 (9) |
| C5 | 0.0221 (8) | 0.0304 (9) | 0.0344 (9) | 0.0059 (6) | −0.0081 (7) | −0.0022 (7) |
| C6 | 0.0358 (10) | 0.0244 (8) | 0.0621 (14) | 0.0050 (7) | −0.0197 (10) | 0.0031 (9) |
| C7 | 0.0272 (8) | 0.0337 (9) | 0.0189 (7) | 0.0008 (7) | −0.0008 (6) | −0.0015 (7) |
| C8 | 0.0321 (10) | 0.0489 (11) | 0.0233 (8) | 0.0010 (9) | 0.0014 (7) | 0.0001 (8) |
| N1 | 0.0212 (7) | 0.0307 (8) | 0.0266 (7) | 0.0027 (6) | −0.0046 (5) | −0.0025 (6) |
| N2 | 0.0230 (7) | 0.0287 (7) | 0.0346 (8) | 0.0049 (6) | −0.0086 (6) | −0.0031 (6) |
| Ni1 | 0.01593 (17) | 0.02772 (18) | 0.01579 (17) | 0.000 | −0.00177 (9) | 0.000 |
| O1 | 0.0255 (6) | 0.0512 (9) | 0.0164 (6) | 0.0054 (5) | −0.0009 (4) | −0.0025 (5) |
| O2 | 0.0270 (6) | 0.0532 (8) | 0.0238 (6) | 0.0093 (6) | 0.0004 (5) | −0.0013 (6) |
| O3 | 0.0263 (6) | 0.0357 (7) | 0.0253 (7) | −0.0042 (5) | −0.0021 (5) | −0.0035 (5) |
| C1—C2 | 1.353 (3) | C6—H6 | 0.9300 |
| C1—N1 | 1.381 (2) | C7—O1 | 1.253 (2) |
| C1—H1 | 0.9300 | C7—O2 | 1.255 (2) |
| C2—N2 | 1.373 (2) | C7—C8 | 1.496 (3) |
| C2—H2 | 0.9300 | C8—C8ii | 1.326 (4) |
| C3—N1 | 1.310 (2) | C8—H8 | 0.9300 |
| C3—N2 | 1.348 (2) | N1—Ni1 | 2.0670 (15) |
| C3—H3 | 0.9300 | Ni1—O1 | 2.0443 (15) |
| C4—C5 | 1.379 (3) | Ni1—O1iii | 2.0443 (15) |
| C4—C6i | 1.381 (3) | Ni1—N1iii | 2.0671 (15) |
| C4—H4 | 0.9300 | Ni1—O3iii | 2.1247 (13) |
| C5—C6 | 1.375 (3) | Ni1—O3 | 2.1247 (13) |
| C5—N2 | 1.425 (2) | O3—H3Y | 0.8500 |
| C6—C4i | 1.381 (3) | O3—H3X | 0.8501 |
| C2—C1—N1 | 109.66 (16) | C3—N1—Ni1 | 123.47 (13) |
| C2—C1—H1 | 125.2 | C1—N1—Ni1 | 130.81 (12) |
| N1—C1—H1 | 125.2 | C3—N2—C2 | 107.19 (15) |
| C1—C2—N2 | 106.02 (17) | C3—N2—C5 | 125.53 (15) |
| C1—C2—H2 | 127.0 | C2—N2—C5 | 127.28 (15) |
| N2—C2—H2 | 127.0 | O1—Ni1—O1iii | 175.41 (8) |
| N1—C3—N2 | 111.46 (16) | O1—Ni1—N1 | 89.42 (5) |
| N1—C3—H3 | 124.3 | O1iii—Ni1—N1 | 93.80 (5) |
| N2—C3—H3 | 124.3 | O1—Ni1—N1iii | 93.79 (5) |
| C5—C4—C6i | 119.07 (18) | O1iii—Ni1—N1iii | 89.42 (5) |
| C5—C4—H4 | 120.5 | N1—Ni1—N1iii | 91.04 (9) |
| C6i—C4—H4 | 120.5 | O1—Ni1—O3iii | 87.80 (5) |
| C6—C5—C4 | 120.85 (16) | O1iii—Ni1—O3iii | 88.96 (5) |
| C6—C5—N2 | 119.55 (16) | N1—Ni1—O3iii | 177.19 (5) |
| C4—C5—N2 | 119.57 (16) | N1iii—Ni1—O3iii | 89.51 (6) |
| C5—C6—C4i | 120.07 (18) | O1—Ni1—O3 | 88.96 (5) |
| C5—C6—H6 | 120.0 | O1iii—Ni1—O3 | 87.79 (5) |
| C4i—C6—H6 | 120.0 | N1—Ni1—O3 | 89.50 (6) |
| O1—C7—O2 | 126.58 (16) | N1iii—Ni1—O3 | 177.19 (5) |
| O1—C7—C8 | 116.29 (16) | O3iii—Ni1—O3 | 90.09 (8) |
| O2—C7—C8 | 117.06 (16) | C7—O1—Ni1 | 130.74 (12) |
| C8ii—C8—C7 | 122.8 (2) | Ni1—O3—H3Y | 109.6 |
| C8ii—C8—H8 | 118.6 | Ni1—O3—H3X | 109.3 |
| C7—C8—H8 | 118.6 | H3Y—O3—H3X | 109.5 |
| C3—N1—C1 | 105.67 (15) | ||
| N1—C1—C2—N2 | 0.8 (2) | C4—C5—N2—C2 | 36.9 (3) |
| C6i—C4—C5—C6 | 0.6 (4) | C3—N1—Ni1—O1 | 45.30 (16) |
| C6i—C4—C5—N2 | 178.9 (2) | C1—N1—Ni1—O1 | −131.70 (17) |
| C4—C5—C6—C4i | −0.6 (4) | C3—N1—Ni1—O1iii | −131.42 (15) |
| N2—C5—C6—C4i | −178.9 (2) | C1—N1—Ni1—O1iii | 51.58 (17) |
| O1—C7—C8—C8ii | −16.9 (2) | C3—N1—Ni1—N1iii | 139.09 (17) |
| O2—C7—C8—C8ii | 160.34 (12) | C1—N1—Ni1—N1iii | −37.91 (15) |
| N2—C3—N1—C1 | −0.2 (2) | C3—N1—Ni1—O3iii | 38.0 (12) |
| N2—C3—N1—Ni1 | −177.88 (12) | C1—N1—Ni1—O3iii | −139.0 (10) |
| C2—C1—N1—C3 | −0.4 (2) | C3—N1—Ni1—O3 | −43.66 (15) |
| C2—C1—N1—Ni1 | 177.04 (15) | C1—N1—Ni1—O3 | 139.33 (17) |
| N1—C3—N2—C2 | 0.7 (2) | O2—C7—O1—Ni1 | 2.1 (3) |
| N1—C3—N2—C5 | −179.97 (17) | C8—C7—O1—Ni1 | 179.05 (13) |
| C1—C2—N2—C3 | −0.9 (2) | O1iii—Ni1—O1—C7 | −73.40 (17) |
| C1—C2—N2—C5 | 179.80 (19) | N1—Ni1—O1—C7 | 152.04 (17) |
| C6—C5—N2—C3 | 36.0 (3) | N1iii—Ni1—O1—C7 | 61.04 (17) |
| C4—C5—N2—C3 | −142.3 (2) | O3iii—Ni1—O1—C7 | −28.32 (17) |
| C6—C5—N2—C2 | −144.8 (2) | O3—Ni1—O1—C7 | −118.44 (17) |
| H··· | ||||
| O3—H3 | 0.85 | 1.96 | 2.7033 (18) | 146 |
| O3—H3 | 0.85 | 2.03 | 2.8361 (18) | 159 |
| C3—H3···O2iv | 0.93 | 2.49 | 3.360 (2) | 155 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O3—H3 | 0.85 | 1.96 | 2.7033 (18) | 146 |
| O3—H3 | 0.85 | 2.03 | 2.8361 (18) | 159 |
| C3—H3⋯O2ii | 0.93 | 2.49 | 3.360 (2) | 155 |
Symmetry codes: (i) ; (ii) .