| Literature DB >> 23125596 |
Mi Feng1, Yu-Fei Ji, Sheng-Li Liang, Zhi-Liang Liu.
Abstract
In the title structure, [Co(C(12)H(10)N(6))(2)(H(2)O)(2)](ClO(4))(2), the Co(II) atom lies on an inversion centre and is coordinated in a slightly distorted octa-hedral geometry by four N atoms from two 4-amino-3,5-bis-(pyridin-2-yl)-4H-1,2,4-triazole (adpt) ligands in equatorial positions and two O atoms from two water mol-ecules in axial positions. An intra-molecular N-H⋯N inter-action stabilizes the mol-ecular conformation. Inter-molecular N-H⋯O and O-H⋯O inter-actions involving the perchlorate counter-anions extend the monomeric compound into a two-dimensional network parallel to the bc plane.Entities:
Year: 2012 PMID: 23125596 PMCID: PMC3470152 DOI: 10.1107/S1600536812038573
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C12H10N6)2(H2O)2](ClO4)2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 3601 reflections |
| θ = 2.2–27.9° | |
| µ = 0.82 mm−1 | |
| β = 114.34 (2)° | Block, dark red |
| 0.04 × 0.03 × 0.01 mm | |
| Bruker SMART APEX CCD diffractometer | 2681 independent reflections |
| Radiation source: fine-focus sealed tube | 2336 reflections with |
| Graphite monochromator | |
| ω scans | θmax = 25.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 10155 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2681 reflections | (Δ/σ)max < 0.001 |
| 223 parameters | Δρmax = 0.87 e Å−3 |
| 0 restraints | Δρmin = −0.50 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.5000 | 0.5000 | 0.0181 (2) | |
| Cl1 | 0.51836 (11) | 0.31957 (6) | 0.20373 (6) | 0.0255 (2) | |
| N1 | 0.2655 (3) | 0.5819 (2) | 0.46508 (18) | 0.0182 (6) | |
| N2 | 0.7370 (3) | 0.6987 (2) | 0.59168 (19) | 0.0203 (6) | |
| N3 | 0.5833 (3) | 0.64755 (19) | 0.55294 (19) | 0.0188 (6) | |
| N4 | 0.5287 (3) | 0.80947 (19) | 0.56599 (18) | 0.0165 (6) | |
| N5 | 0.7829 (4) | 0.9719 (2) | 0.6482 (2) | 0.0247 (6) | |
| N6 | 0.4322 (4) | 0.9001 (2) | 0.5607 (2) | 0.0295 (7) | |
| H6A | 0.3984 | 0.9278 | 0.5012 | 0.044* | |
| H6B | 0.4971 | 0.9452 | 0.6054 | 0.044* | |
| O1 | 0.5064 (3) | 0.54303 (18) | 0.36619 (16) | 0.0287 (6) | |
| H1A | 0.5952 | 0.5177 | 0.3628 | 0.043* | |
| H1B | 0.5093 | 0.6085 | 0.3630 | 0.043* | |
| O2 | 0.6254 (4) | 0.2589 (3) | 0.1740 (3) | 0.0633 (10) | |
| O3 | 0.4116 (4) | 0.3823 (2) | 0.1213 (2) | 0.0555 (9) | |
| O4 | 0.6210 (4) | 0.3837 (2) | 0.2840 (2) | 0.0475 (8) | |
| O5 | 0.4126 (4) | 0.2533 (3) | 0.2297 (2) | 0.0687 (11) | |
| C1 | 0.2804 (4) | 0.6823 (2) | 0.4928 (2) | 0.0181 (7) | |
| C2 | 0.1401 (4) | 0.7437 (3) | 0.4777 (2) | 0.0229 (7) | |
| H2 | 0.1537 | 0.8123 | 0.4977 | 0.027* | |
| C3 | −0.0217 (4) | 0.7004 (3) | 0.4318 (3) | 0.0273 (8) | |
| H3 | −0.1184 | 0.7398 | 0.4211 | 0.033* | |
| C4 | −0.0381 (4) | 0.5988 (3) | 0.4024 (2) | 0.0261 (8) | |
| H4 | −0.1457 | 0.5692 | 0.3704 | 0.031* | |
| C5 | 0.1082 (4) | 0.5415 (3) | 0.4210 (2) | 0.0228 (7) | |
| H5 | 0.0969 | 0.4724 | 0.4023 | 0.027* | |
| C6 | 0.4598 (4) | 0.7148 (2) | 0.5385 (2) | 0.0171 (7) | |
| C7 | 0.7014 (4) | 0.7965 (2) | 0.5981 (2) | 0.0190 (7) | |
| C8 | 0.8325 (4) | 0.8777 (2) | 0.6329 (2) | 0.0205 (7) | |
| C9 | 0.9991 (4) | 0.8547 (3) | 0.6470 (3) | 0.0285 (8) | |
| H9 | 1.0293 | 0.7879 | 0.6378 | 0.034* | |
| C10 | 1.1191 (5) | 0.9332 (3) | 0.6750 (3) | 0.0334 (9) | |
| H10 | 1.2307 | 0.9207 | 0.6828 | 0.040* | |
| C11 | 1.0696 (5) | 1.0310 (3) | 0.6914 (3) | 0.0313 (8) | |
| H11 | 1.1477 | 1.0851 | 0.7107 | 0.038* | |
| C12 | 0.9036 (5) | 1.0464 (3) | 0.6786 (3) | 0.0287 (8) | |
| H12 | 0.8726 | 1.1116 | 0.6915 | 0.034* |
| Co1 | 0.0183 (3) | 0.0139 (3) | 0.0231 (3) | −0.0002 (2) | 0.0096 (3) | −0.0014 (2) |
| Cl1 | 0.0309 (5) | 0.0211 (4) | 0.0282 (5) | −0.0011 (3) | 0.0160 (4) | −0.0031 (3) |
| N1 | 0.0186 (14) | 0.0168 (14) | 0.0212 (13) | −0.0010 (11) | 0.0103 (11) | 0.0001 (11) |
| N2 | 0.0157 (14) | 0.0183 (14) | 0.0245 (14) | −0.0012 (11) | 0.0058 (12) | −0.0021 (11) |
| N3 | 0.0174 (14) | 0.0143 (13) | 0.0244 (14) | 0.0001 (11) | 0.0083 (12) | −0.0013 (11) |
| N4 | 0.0191 (14) | 0.0131 (13) | 0.0185 (13) | 0.0010 (10) | 0.0091 (11) | −0.0003 (10) |
| N5 | 0.0233 (15) | 0.0187 (14) | 0.0297 (16) | −0.0012 (12) | 0.0086 (13) | −0.0012 (12) |
| N6 | 0.0262 (16) | 0.0185 (15) | 0.0424 (18) | 0.0023 (12) | 0.0128 (14) | −0.0011 (13) |
| O1 | 0.0389 (15) | 0.0206 (12) | 0.0312 (13) | 0.0066 (11) | 0.0191 (12) | 0.0034 (10) |
| O2 | 0.0474 (19) | 0.070 (2) | 0.073 (2) | 0.0008 (17) | 0.0256 (17) | −0.0440 (19) |
| O3 | 0.062 (2) | 0.0395 (18) | 0.0509 (18) | 0.0045 (16) | 0.0092 (16) | 0.0161 (14) |
| O4 | 0.0537 (19) | 0.0519 (18) | 0.0393 (16) | −0.0126 (15) | 0.0217 (14) | −0.0229 (14) |
| O5 | 0.060 (2) | 0.096 (3) | 0.0425 (18) | −0.046 (2) | 0.0130 (16) | 0.0131 (18) |
| C1 | 0.0217 (17) | 0.0179 (16) | 0.0181 (16) | −0.0007 (13) | 0.0116 (14) | 0.0017 (12) |
| C2 | 0.0237 (18) | 0.0196 (17) | 0.0283 (18) | 0.0016 (14) | 0.0138 (15) | −0.0002 (14) |
| C3 | 0.0205 (18) | 0.0293 (19) | 0.035 (2) | 0.0053 (15) | 0.0145 (16) | 0.0059 (15) |
| C4 | 0.0165 (17) | 0.032 (2) | 0.0295 (18) | −0.0049 (15) | 0.0090 (15) | −0.0010 (15) |
| C5 | 0.0240 (18) | 0.0206 (17) | 0.0268 (17) | −0.0019 (14) | 0.0134 (15) | −0.0012 (14) |
| C6 | 0.0212 (17) | 0.0156 (16) | 0.0175 (15) | −0.0007 (13) | 0.0109 (13) | 0.0007 (12) |
| C7 | 0.0218 (17) | 0.0181 (16) | 0.0193 (16) | −0.0002 (13) | 0.0107 (14) | 0.0002 (13) |
| C8 | 0.0214 (17) | 0.0196 (17) | 0.0198 (16) | −0.0013 (13) | 0.0077 (14) | −0.0007 (13) |
| C9 | 0.0248 (19) | 0.0256 (19) | 0.0339 (19) | −0.0015 (15) | 0.0111 (16) | −0.0073 (15) |
| C10 | 0.0230 (19) | 0.039 (2) | 0.038 (2) | −0.0043 (16) | 0.0120 (17) | −0.0086 (17) |
| C11 | 0.028 (2) | 0.029 (2) | 0.031 (2) | −0.0115 (16) | 0.0065 (16) | −0.0048 (16) |
| C12 | 0.029 (2) | 0.0191 (18) | 0.0338 (19) | −0.0032 (15) | 0.0089 (16) | −0.0063 (15) |
| Co1—N3 | 2.079 (3) | N6—H6B | 0.8901 |
| Co1—N3i | 2.079 (3) | O1—H1A | 0.8500 |
| Co1—O1i | 2.102 (2) | O1—H1B | 0.8500 |
| Co1—O1 | 2.102 (2) | C1—C2 | 1.381 (4) |
| Co1—N1 | 2.141 (3) | C1—C6 | 1.466 (4) |
| Co1—N1i | 2.141 (3) | C2—C3 | 1.389 (5) |
| Cl1—O2 | 1.413 (3) | C2—H2 | 0.9300 |
| Cl1—O5 | 1.416 (3) | C3—C4 | 1.376 (5) |
| Cl1—O4 | 1.428 (3) | C3—H3 | 0.9300 |
| Cl1—O3 | 1.446 (3) | C4—C5 | 1.385 (5) |
| N1—C5 | 1.341 (4) | C4—H4 | 0.9300 |
| N1—C1 | 1.355 (4) | C5—H5 | 0.9300 |
| N2—C7 | 1.316 (4) | C7—C8 | 1.470 (4) |
| N2—N3 | 1.372 (4) | C8—C9 | 1.389 (5) |
| N3—C6 | 1.319 (4) | C9—C10 | 1.384 (5) |
| N4—C6 | 1.350 (4) | C9—H9 | 0.9300 |
| N4—C7 | 1.367 (4) | C10—C11 | 1.390 (5) |
| N4—N6 | 1.420 (4) | C10—H10 | 0.9300 |
| N5—C8 | 1.342 (4) | C11—C12 | 1.372 (5) |
| N5—C12 | 1.350 (5) | C11—H11 | 0.9300 |
| N6—H6A | 0.8901 | C12—H12 | 0.9300 |
| N3—Co1—N3i | 180.0 | H1A—O1—H1B | 109.5 |
| N3—Co1—O1i | 91.15 (10) | N1—C1—C2 | 122.4 (3) |
| N3i—Co1—O1i | 88.85 (10) | N1—C1—C6 | 111.5 (3) |
| N3—Co1—O1 | 88.85 (10) | C2—C1—C6 | 126.1 (3) |
| N3i—Co1—O1 | 91.15 (10) | C1—C2—C3 | 118.4 (3) |
| O1i—Co1—O1 | 180.000 (1) | C1—C2—H2 | 120.8 |
| N3—Co1—N1 | 77.24 (10) | C3—C2—H2 | 120.8 |
| N3i—Co1—N1 | 102.76 (10) | C4—C3—C2 | 119.6 (3) |
| O1i—Co1—N1 | 88.45 (9) | C4—C3—H3 | 120.2 |
| O1—Co1—N1 | 91.55 (9) | C2—C3—H3 | 120.2 |
| N3—Co1—N1i | 102.76 (10) | C3—C4—C5 | 119.0 (3) |
| N3i—Co1—N1i | 77.24 (10) | C3—C4—H4 | 120.5 |
| O1i—Co1—N1i | 91.55 (9) | C5—C4—H4 | 120.5 |
| O1—Co1—N1i | 88.45 (9) | N1—C5—C4 | 122.3 (3) |
| N1—Co1—N1i | 180.000 (1) | N1—C5—H5 | 118.8 |
| O2—Cl1—O5 | 108.9 (3) | C4—C5—H5 | 118.8 |
| O2—Cl1—O4 | 109.47 (19) | N3—C6—N4 | 109.2 (3) |
| O5—Cl1—O4 | 111.4 (2) | N3—C6—C1 | 120.4 (3) |
| O2—Cl1—O3 | 108.0 (2) | N4—C6—C1 | 130.3 (3) |
| O5—Cl1—O3 | 108.8 (2) | N2—C7—N4 | 110.1 (3) |
| O4—Cl1—O3 | 110.2 (2) | N2—C7—C8 | 123.2 (3) |
| C5—N1—C1 | 118.3 (3) | N4—C7—C8 | 126.7 (3) |
| C5—N1—Co1 | 125.6 (2) | N5—C8—C9 | 123.3 (3) |
| C1—N1—Co1 | 116.1 (2) | N5—C8—C7 | 117.4 (3) |
| C7—N2—N3 | 106.5 (3) | C9—C8—C7 | 119.3 (3) |
| C6—N3—N2 | 108.6 (2) | C10—C9—C8 | 118.7 (3) |
| C6—N3—Co1 | 114.6 (2) | C10—C9—H9 | 120.7 |
| N2—N3—Co1 | 136.4 (2) | C8—C9—H9 | 120.7 |
| C6—N4—C7 | 105.7 (3) | C9—C10—C11 | 118.7 (3) |
| C6—N4—N6 | 124.2 (3) | C9—C10—H10 | 120.7 |
| C7—N4—N6 | 130.1 (3) | C11—C10—H10 | 120.7 |
| C8—N5—C12 | 117.0 (3) | C12—C11—C10 | 118.9 (3) |
| N4—N6—H6A | 109.3 | C12—C11—H11 | 120.6 |
| N4—N6—H6B | 109.2 | C10—C11—H11 | 120.6 |
| H6A—N6—H6B | 109.5 | N5—C12—C11 | 123.5 (3) |
| Co1—O1—H1A | 109.3 | N5—C12—H12 | 118.2 |
| Co1—O1—H1B | 109.3 | C11—C12—H12 | 118.2 |
| N3—Co1—N1—C5 | −179.1 (3) | Co1—N3—C6—N4 | −173.37 (18) |
| N3i—Co1—N1—C5 | 0.9 (3) | N2—N3—C6—C1 | 176.9 (3) |
| O1i—Co1—N1—C5 | −87.5 (3) | Co1—N3—C6—C1 | 3.0 (4) |
| O1—Co1—N1—C5 | 92.5 (3) | C7—N4—C6—N3 | 0.0 (3) |
| N3—Co1—N1—C1 | −0.9 (2) | N6—N4—C6—N3 | −179.7 (3) |
| N3i—Co1—N1—C1 | 179.1 (2) | C7—N4—C6—C1 | −175.8 (3) |
| O1i—Co1—N1—C1 | 90.7 (2) | N6—N4—C6—C1 | 4.4 (5) |
| O1—Co1—N1—C1 | −89.3 (2) | N1—C1—C6—N3 | −3.6 (4) |
| C7—N2—N3—C6 | −1.0 (3) | C2—C1—C6—N3 | 176.9 (3) |
| C7—N2—N3—Co1 | 171.1 (2) | N1—C1—C6—N4 | 171.8 (3) |
| O1i—Co1—N3—C6 | −89.3 (2) | C2—C1—C6—N4 | −7.7 (5) |
| O1—Co1—N3—C6 | 90.7 (2) | N3—N2—C7—N4 | 1.0 (3) |
| N1—Co1—N3—C6 | −1.1 (2) | N3—N2—C7—C8 | −177.6 (3) |
| N1i—Co1—N3—C6 | 178.9 (2) | C6—N4—C7—N2 | −0.6 (3) |
| O1i—Co1—N3—N2 | 99.0 (3) | N6—N4—C7—N2 | 179.1 (3) |
| O1—Co1—N3—N2 | −81.0 (3) | C6—N4—C7—C8 | 177.8 (3) |
| N1—Co1—N3—N2 | −172.8 (3) | N6—N4—C7—C8 | −2.4 (5) |
| N1i—Co1—N3—N2 | 7.2 (3) | C12—N5—C8—C9 | 0.2 (5) |
| C5—N1—C1—C2 | 0.3 (4) | C12—N5—C8—C7 | −178.9 (3) |
| Co1—N1—C1—C2 | −178.0 (2) | N2—C7—C8—N5 | −171.5 (3) |
| C5—N1—C1—C6 | −179.2 (3) | N4—C7—C8—N5 | 10.2 (5) |
| Co1—N1—C1—C6 | 2.5 (3) | N2—C7—C8—C9 | 9.4 (5) |
| N1—C1—C2—C3 | −0.4 (5) | N4—C7—C8—C9 | −169.0 (3) |
| C6—C1—C2—C3 | 179.1 (3) | N5—C8—C9—C10 | −2.3 (5) |
| C1—C2—C3—C4 | −0.4 (5) | C7—C8—C9—C10 | 176.8 (3) |
| C2—C3—C4—C5 | 1.3 (5) | C8—C9—C10—C11 | 2.3 (5) |
| C1—N1—C5—C4 | 0.6 (5) | C9—C10—C11—C12 | −0.4 (5) |
| Co1—N1—C5—C4 | 178.8 (2) | C8—N5—C12—C11 | 1.9 (5) |
| C3—C4—C5—N1 | −1.4 (5) | C10—C11—C12—N5 | −1.8 (6) |
| N2—N3—C6—N4 | 0.6 (3) |
| H··· | ||||
| N6—H6 | 0.89 | 2.29 | 2.897 (4) | 125 |
| N6—H6 | 0.89 | 2.39 | 2.989 (4) | 124 |
| O1—H1 | 0.85 | 2.16 | 2.782 (4) | 130 |
| O1—H1 | 0.85 | 2.22 | 2.983 (4) | 150 |
| O1—H1 | 0.85 | 2.58 | 3.284 (5) | 141 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N6—H6 | 0.89 | 2.29 | 2.897 (4) | 125 |
| N6—H6 | 0.89 | 2.39 | 2.989 (4) | 124 |
| O1—H1 | 0.85 | 2.16 | 2.782 (4) | 130 |
| O1—H1 | 0.85 | 2.22 | 2.983 (4) | 150 |
| O1—H1 | 0.85 | 2.58 | 3.284 (5) | 141 |
Symmetry codes: (i) ; (ii) .