Literature DB >> 23125586

{4,4'-Dimeth-oxy-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methanylyl-idene)]diphenolato}copper(II) monohydrate.

Fatemeh Ganji1, Hadi Kargar, Reza Kia, Valiollah Mirkhani, Muhammad Nawaz Tahir.   

Abstract

The asymmetric unit of the title compound, [Cu(C(21)H(24)N(2)O(4))]·H(2)O, comprises half of a Schiff base complex and a water mol-ecule. The Cu(II) atom, water mol-ecule and one C atom of the central propyl-ene segment are located on a twofold rotation axis. The geometry around the Cu(II) atom is distorted square-planar, supported by the N(2)O(2) donor atoms of the coordinating ligand. The dihedral angle between the symmetry-related benzene rings is 42.56 (19)°. In the crystal, O-H⋯O hydrogen bonds involving the water mol-ecule make an R(2) (1)(6) ring motif. Complex mol-ecules are linked into a chain along the c axis via C-H⋯O inter-actions.

Entities:  

Year:  2012        PMID: 23125586      PMCID: PMC3470142          DOI: 10.1107/S1600536812038135

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For standard bond lengths, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For applications of Schiff bases in coordination chemistry, see, for example: Granovski et al. (1993 ▶); Blower et al. (1998 ▶). For related structures, see, for example: Ghaemi et al. (2011 ▶); Kargar et al. (2011 ▶, 2012 ▶).

Experimental

Crystal data

[Cu(C21H24N2O4)]·H2O M = 449.98 Orthorhombic, a = 20.567 (2) Å b = 12.2647 (14) Å c = 8.4287 (7) Å V = 2126.1 (4) Å3 Z = 4 Mo Kα radiation μ = 1.06 mm−1 T = 291 K 0.21 × 0.14 × 0.08 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.256, T max = 0.535 17546 measured reflections 2620 independent reflections 1113 reflections with I > 2σ(I) R int = 0.115

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.140 S = 0.98 2620 reflections 134 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.36 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812038135/kp2436sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812038135/kp2436Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C21H24N2O4)]·H2OF(000) = 940
Mr = 449.98Dx = 1.406 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 2169 reflections
a = 20.567 (2) Åθ = 2.5–27.4°
b = 12.2647 (14) ŵ = 1.06 mm1
c = 8.4287 (7) ÅT = 291 K
V = 2126.1 (4) Å3Block, dark-green
Z = 40.21 × 0.14 × 0.08 mm
Bruker SMART APEXII CCD area-detector diffractometer2620 independent reflections
Radiation source: fine-focus sealed tube1113 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.115
φ and ω scansθmax = 28.3°, θmin = 3.1°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −27→27
Tmin = 0.256, Tmax = 0.535k = −16→16
17546 measured reflectionsl = −10→8
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.140H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0498P)2 + 0.1009P] where P = (Fo2 + 2Fc2)/3
2620 reflections(Δ/σ)max < 0.001
134 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.36 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1W0.50000.1449 (4)−0.25000.136 (2)
H1W0.51990.1907−0.18310.205*
N10.44802 (15)0.5832 (3)−0.1447 (3)0.0486 (8)
C10.37450 (19)0.3777 (3)−0.1853 (4)0.0476 (10)
C20.3307 (2)0.2908 (3)−0.2041 (5)0.0616 (12)
H10.34480.2271−0.25310.074*
C30.2675 (2)0.2974 (3)−0.1520 (5)0.0642 (12)
H30.23950.2389−0.16820.077*
C40.24498 (19)0.3899 (3)−0.0757 (5)0.0547 (11)
C50.28556 (19)0.4760 (3)−0.0581 (5)0.0516 (10)
H50.27030.5388−0.00870.062*
C60.35058 (18)0.4730 (3)−0.1130 (4)0.0459 (9)
C70.1550 (2)0.4783 (4)0.0455 (6)0.0796 (15)
H7A0.17930.49470.13990.119*
H7B0.11040.46500.07300.119*
H7C0.15750.5389−0.02640.119*
C80.38928 (18)0.5688 (3)−0.0937 (4)0.0480 (10)
H80.37040.6265−0.03900.058*
C90.4810 (2)0.6853 (4)−0.1061 (5)0.0596 (12)
H9A0.51970.6691−0.04500.072*
H9B0.45250.7290−0.04000.072*
C100.50000.7548 (5)−0.25000.0626 (16)
C110.4427 (3)0.8223 (5)−0.3009 (7)0.139 (3)
H11A0.45460.8661−0.39060.209*
H11B0.42950.8688−0.21500.209*
H11C0.40730.7751−0.32940.209*
Cu10.50000.47397 (6)−0.25000.0496 (3)
O10.43439 (12)0.3654 (2)−0.2370 (3)0.0530 (7)
O30.18104 (14)0.3856 (3)−0.0270 (4)0.0734 (9)
U11U22U33U12U13U23
O1W0.216 (7)0.081 (4)0.113 (5)0.000−0.022 (4)0.000
N10.045 (2)0.060 (2)0.041 (2)−0.0107 (18)0.0028 (15)−0.0045 (16)
C10.048 (3)0.052 (3)0.043 (2)−0.001 (2)0.0030 (19)0.0007 (19)
C20.058 (3)0.049 (3)0.078 (3)−0.002 (2)0.010 (2)−0.009 (2)
C30.054 (3)0.054 (3)0.085 (3)−0.011 (2)0.010 (2)−0.005 (2)
C40.040 (2)0.059 (3)0.065 (3)−0.001 (2)0.003 (2)0.004 (2)
C50.046 (2)0.054 (3)0.054 (2)0.003 (2)0.005 (2)−0.003 (2)
C60.043 (2)0.048 (2)0.046 (2)0.000 (2)−0.0001 (18)0.000 (2)
C70.053 (3)0.091 (4)0.095 (4)−0.008 (3)0.019 (3)−0.006 (3)
C80.048 (2)0.050 (3)0.046 (2)0.002 (2)0.002 (2)−0.0086 (19)
C90.056 (3)0.068 (3)0.054 (3)−0.015 (2)0.003 (2)−0.008 (2)
C100.072 (4)0.054 (4)0.062 (4)0.0000.006 (4)0.000
C110.178 (7)0.137 (5)0.102 (4)0.106 (5)0.047 (4)0.041 (4)
Cu10.0406 (4)0.0587 (5)0.0494 (4)0.0000.0029 (3)0.000
O10.0433 (15)0.0533 (17)0.0624 (18)0.0010 (12)0.0043 (15)−0.0051 (14)
O30.0435 (17)0.073 (2)0.104 (3)−0.0068 (16)0.0141 (16)−0.0039 (18)
O1W—H1W0.8940C7—H7A0.9600
N1—C81.295 (4)C7—H7B0.9600
N1—C91.460 (5)C7—H7C0.9600
N1—Cu11.930 (3)C8—H80.9300
C1—O11.315 (4)C9—C101.533 (5)
C1—C21.405 (5)C9—H9A0.9691
C1—C61.407 (5)C9—H9B0.9699
C2—C31.374 (5)C10—C11i1.503 (6)
C2—H10.9300C10—C111.503 (6)
C3—C41.384 (5)C10—C9i1.533 (5)
C3—H30.9300C11—H11A0.9600
C4—C51.354 (5)C11—H11B0.9600
C4—O31.379 (4)C11—H11C0.9600
C5—C61.415 (5)Cu1—O11.899 (3)
C5—H50.9300Cu1—O1i1.899 (3)
C6—C81.429 (5)Cu1—N1i1.930 (3)
C7—O31.398 (5)
C8—N1—C9118.5 (3)N1—C8—H8116.8
C8—N1—Cu1125.1 (3)C6—C8—H8116.8
C9—N1—Cu1116.1 (3)N1—C9—C10114.7 (3)
O1—C1—C2118.5 (4)N1—C9—H9A108.9
O1—C1—C6124.5 (4)C10—C9—H9A108.9
C2—C1—C6117.0 (4)N1—C9—H9B108.8
C3—C2—C1121.8 (4)C10—C9—H9B107.6
C3—C2—H1119.1H9A—C9—H9B107.7
C1—C2—H1119.1C11i—C10—C11113.1 (7)
C2—C3—C4120.8 (4)C11i—C10—C9i109.4 (3)
C2—C3—H3119.6C11—C10—C9i106.3 (3)
C4—C3—H3119.6C11i—C10—C9106.3 (3)
C5—C4—O3125.9 (4)C11—C10—C9109.4 (3)
C5—C4—C3119.0 (4)C9i—C10—C9112.5 (5)
O3—C4—C3115.2 (4)C10—C11—H11A109.5
C4—C5—C6121.7 (4)C10—C11—H11B109.5
C4—C5—H5119.1H11A—C11—H11B109.5
C6—C5—H5119.1C10—C11—H11C109.5
C1—C6—C5119.6 (4)H11A—C11—H11C109.5
C1—C6—C8122.5 (4)H11B—C11—H11C109.5
C5—C6—C8117.9 (4)O1—Cu1—O1i90.97 (15)
O3—C7—H7A109.5O1—Cu1—N1i155.08 (11)
O3—C7—H7B109.5O1i—Cu1—N1i93.83 (12)
H7A—C7—H7B109.5O1—Cu1—N193.83 (12)
O3—C7—H7C109.5O1i—Cu1—N1155.08 (11)
H7A—C7—H7C109.5N1i—Cu1—N192.05 (18)
H7B—C7—H7C109.5C1—O1—Cu1127.2 (2)
N1—C8—C6126.5 (4)C4—O3—C7117.6 (3)
O1—C1—C2—C3179.5 (4)Cu1—N1—C9—C1068.1 (4)
C6—C1—C2—C3−1.1 (6)N1—C9—C10—C11i−153.9 (4)
C1—C2—C3—C4−1.3 (7)N1—C9—C10—C1183.7 (5)
C2—C3—C4—C52.4 (7)N1—C9—C10—C9i−34.2 (2)
C2—C3—C4—O3−179.0 (4)C8—N1—Cu1—O1−0.3 (3)
O3—C4—C5—C6−179.6 (4)C9—N1—Cu1—O1172.8 (3)
C3—C4—C5—C6−1.2 (6)C8—N1—Cu1—O1i−100.9 (4)
O1—C1—C6—C5−178.4 (3)C9—N1—Cu1—O1i72.2 (4)
C2—C1—C6—C52.2 (6)C8—N1—Cu1—N1i155.4 (4)
O1—C1—C6—C82.4 (6)C9—N1—Cu1—N1i−31.4 (2)
C2—C1—C6—C8−177.0 (3)C2—C1—O1—Cu1171.9 (3)
C4—C5—C6—C1−1.1 (6)C6—C1—O1—Cu1−7.5 (5)
C4—C5—C6—C8178.1 (3)O1i—Cu1—O1—C1161.4 (3)
C9—N1—C8—C6−176.9 (3)N1i—Cu1—O1—C1−97.4 (4)
Cu1—N1—C8—C6−3.9 (5)N1—Cu1—O1—C15.9 (3)
C1—C6—C8—N13.7 (6)C5—C4—O3—C70.8 (6)
C5—C6—C8—N1−175.6 (4)C3—C4—O3—C7−177.7 (4)
C8—N1—C9—C10−118.3 (4)
D—H···AD—HH···AD···AD—H···A
O1W—H1W···O1i0.892.433.024 (5)124
C9—H9A···O1ii0.972.593.432 (5)145
Table 1

Selected bond lengths (Å)

N1—Cu11.930 (3)
Cu1—O11.899 (3)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H1W⋯O1i 0.892.433.024 (5)124
C9—H9A⋯O1ii 0.972.593.432 (5)145

Symmetry codes: (i) ; (ii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  {4,4'-Dichloro-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methanyl-ylidene)]diphenolato-κO,N,N',O'}nickel(II).

Authors:  Hadi Kargar; Reza Kia; Elham Pahlavani; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-18

3.  {5,5'-Dimeth-oxy-2,2'-[1,1'-(2,2-dimethyl-propane-1,3-diyldinitrilo)-diethyl-idyne]diphenolato-κO,N,N',O'}copper(II) monohydrate.

Authors:  Akbar Ghaemi; Saeed Rayati; Ehsan Elahi; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

4.  {4,4'-Dimethyl-2,2'-[(2,2-dimethyl-propane-1,3-di-yl)bis-(nitrilo-methanylyl-idene)]diphenolato}nickel(II) monohydrate.

Authors:  Hadi Kargar; Reza Kia; Zahra Sharafi; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-23

5.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.