Literature DB >> 23125571

Tetra-kis(dimethyl-ammonium) trans-di-chloridobis[5,5'-(pyrazine-2,3-diyl)bis(1H-tetra-zol-1-ido-κN(1))]copper(II).

Ju-Hsiou Liao1, Pei-Shan Shi.   

Abstract

The title compound, (C(2)H(8)N)(4)[n class="Chemical">Cu(C(6)H(2)N(10))(2)Cl(2)], consists of an anionic complex which is composed of a Cu(II) ion surrounded by four N atoms from two pyrazine-2,3-diylbis(1H-tetra-zol-1-ide) ligands, and two Cl(-) atoms in a trans-Cl(2)N(4) coordination geometry; the Cu(II) atom lies on a site of symmetry 2/m. The Cu-Cl distance of 2.8719 (5) Å is long due to the Jahn-Teller distortion of the d(9) electron configuration of Cu(II) ion. The tetra-zole and pyrazine rings make an N-C-C-N torsion angle of 38.25 (17)°. The charge of the anionic complex is balanced by four dimethyl-ammonium cations, which inter-act with the anionic complexes via N-H⋯N and N-H⋯Cl hydrogen bonds.

Entities:  

Year:  2012        PMID: 23125571      PMCID: PMC3470127          DOI: 10.1107/S1600536812036896

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the coordination compound of 2,3-di-1H-tetra­zol-5-yl­pyrazine, see: Li et al. (2008 ▶). For related structure, see Tao et al. (2010 ▶).

Experimental

Crystal data

(C2H8N)4[n class="Chemical">Cu(C6H2N10)2Cl2] M = 747.17 Orthorhombic, a = 20.613 (2) Å b = 10.5671 (9) Å c = 15.0687 (12) Å V = 3282.3 (5) Å3 Z = 4 Mo Kα radiation μ = 0.89 mm−1 T = 293 K 0.06 × 0.06 × 0.05 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1999 ▶) T min = 0.947, T max = 0.959 18389 measured reflections 2079 independent reflections 1888 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.085 S = 1.08 2079 reflections 120 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.74 e Å−3 Δρmin = −0.26 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1999 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812036896/pk2440sup1.cif Supplementary material file. DOI: 10.1107/S1600536812036896/pk2440Isup2.cdx Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812036896/pk2440Isup3.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C2H8N)4[Cu(C6H2N10)2Cl2]F(000) = 1548
Mr = 747.17Dx = 1.512 Mg m3
Orthorhombic, CmcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2bc 2Cell parameters from 999 reflections
a = 20.613 (2) Åθ = 5–23.5°
b = 10.5671 (9) ŵ = 0.89 mm1
c = 15.0687 (12) ÅT = 293 K
V = 3282.3 (5) Å3Hexagonal, blue
Z = 40.06 × 0.06 × 0.05 mm
Bruker SMART APEX diffractometer2079 independent reflections
Radiation source: fine-focus sealed tube1888 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
φ–ω scanθmax = 28.3°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 1999)h = −27→26
Tmin = 0.947, Tmax = 0.959k = −14→14
18389 measured reflectionsl = −19→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H atoms treated by a mixture of independent and constrained refinement
S = 1.08w = 1/[σ2(Fo2) + (0.0517P)2 + 1.6198P] where P = (Fo2 + 2Fc2)/3
2079 reflections(Δ/σ)max = 0.001
120 parametersΔρmax = 0.74 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.50000.00000.50000.02900 (12)
Cl10.5000−0.23652 (5)0.59389 (3)0.03605 (14)
C10.42546 (6)0.07284 (12)0.66989 (8)0.0248 (3)
C20.46598 (6)0.00989 (11)0.73673 (8)0.0253 (3)
C30.46657 (8)−0.09929 (14)0.86700 (10)0.0391 (3)
H30.4447−0.13870.91340.047*
C40.32397 (9)0.36802 (17)0.42405 (12)0.0474 (4)
H4A0.31700.33410.48240.071*
H4B0.28360.39850.40060.071*
H4C0.35450.43660.42730.071*
C50.30596 (8)0.15966 (16)0.35528 (11)0.0442 (4)
H5A0.30520.11160.40930.066*
H5B0.32100.10700.30760.066*
H5C0.26300.18940.34210.066*
N10.43237 (5)0.07041 (10)0.58166 (7)0.0266 (2)
N20.38148 (6)0.13511 (11)0.54897 (7)0.0323 (3)
N30.34593 (6)0.17510 (12)0.61510 (8)0.0342 (3)
N40.37226 (6)0.13670 (11)0.69221 (8)0.0312 (3)
N50.43235 (6)−0.04459 (12)0.80258 (8)0.0349 (3)
N60.34981 (6)0.26828 (14)0.36567 (9)0.0364 (3)
H6A0.3595 (11)0.3006 (19)0.3099 (15)0.059 (6)*
H6B0.3887 (12)0.2447 (19)0.3834 (13)0.053 (6)*
U11U22U33U12U13U23
Cu10.01762 (17)0.0475 (2)0.02182 (18)0.0000.000−0.01293 (12)
Cl10.0268 (2)0.0411 (3)0.0402 (3)0.0000.0000.0032 (2)
C10.0213 (6)0.0300 (6)0.0231 (6)−0.0018 (4)0.0021 (4)−0.0041 (5)
C20.0256 (7)0.0273 (6)0.0231 (6)−0.0004 (5)0.0013 (5)−0.0038 (4)
C30.0442 (8)0.0416 (8)0.0316 (7)−0.0034 (7)0.0052 (6)0.0105 (6)
C40.0503 (10)0.0485 (9)0.0433 (9)0.0003 (7)0.0054 (8)0.0000 (7)
C50.0405 (8)0.0494 (9)0.0428 (8)0.0033 (7)−0.0050 (7)−0.0014 (7)
N10.0206 (5)0.0374 (6)0.0219 (5)0.0022 (4)−0.0014 (4)−0.0042 (4)
N20.0238 (5)0.0458 (7)0.0274 (6)0.0061 (5)−0.0025 (4)−0.0016 (5)
N30.0257 (6)0.0451 (7)0.0319 (6)0.0078 (5)0.0006 (4)−0.0013 (5)
N40.0270 (6)0.0386 (6)0.0279 (5)0.0055 (4)0.0045 (4)−0.0020 (5)
N50.0324 (6)0.0413 (6)0.0309 (6)−0.0036 (5)0.0041 (5)0.0050 (5)
N60.0244 (6)0.0565 (8)0.0282 (6)0.0034 (5)0.0017 (5)0.0067 (5)
Cu1—N1i2.0029 (10)C4—H4A0.9600
Cu1—N1ii2.0029 (10)C4—H4B0.9600
Cu1—N12.0029 (10)C4—H4C0.9600
Cu1—N1iii2.0029 (10)C5—N61.469 (2)
Cu1—Cl12.8719 (5)C5—H5A0.9600
C1—N41.3309 (16)C5—H5B0.9600
C1—N11.3374 (15)C5—H5C0.9600
C1—C21.4678 (17)N1—N21.3455 (15)
C2—N51.3405 (17)N1—N21.3455 (15)
C2—C2ii1.402 (3)N2—N31.3071 (16)
C3—N51.3319 (19)N3—N21.3071 (16)
C3—C3ii1.378 (3)N3—N41.3450 (17)
C3—H30.9300N6—H6A0.93 (2)
C4—N61.473 (2)N6—H6B0.88 (2)
N1i—Cu1—N1ii180.0H4B—C4—H4C109.5
N1i—Cu1—N191.77 (6)N6—C5—H5A109.5
N1ii—Cu1—N188.23 (6)N6—C5—H5B109.5
N1i—Cu1—N1iii88.23 (6)H5A—C5—H5B109.5
N1ii—Cu1—N1iii91.77 (6)N6—C5—H5C109.5
N1—Cu1—N1iii180.0H5A—C5—H5C109.5
N1i—Cu1—Cl188.82 (3)H5B—C5—H5C109.5
N1ii—Cu1—Cl191.18 (3)C1—N1—N2105.74 (10)
N1—Cu1—Cl191.18 (3)C1—N1—N2105.74 (10)
N1iii—Cu1—Cl188.82 (3)C1—N1—Cu1133.78 (9)
N4—C1—N1110.40 (11)N2—N1—Cu1120.43 (8)
N4—C1—C2121.69 (11)N2—N1—Cu1120.43 (8)
N1—C1—C2127.80 (11)N3—N2—N1108.79 (10)
N5—C2—C2ii121.15 (8)N2—N3—N4109.56 (11)
N5—C2—C1114.09 (11)N2—N3—N4109.56 (11)
C2ii—C2—C1124.68 (7)C1—N4—N3105.50 (10)
N5—C3—C3ii121.98 (8)C3—N5—C2116.86 (13)
N5—C3—H3119.0C5—N6—C4113.59 (13)
C3ii—C3—H3119.0C5—N6—H6A108.9 (13)
N6—C4—H4A109.5C4—N6—H6A110.8 (13)
N6—C4—H4B109.5C5—N6—H6B111.8 (13)
H4A—C4—H4B109.5C4—N6—H6B110.5 (13)
N6—C4—H4C109.5H6A—N6—H6B100.5 (18)
H4A—C4—H4C109.5
N4—C1—C2—N538.25 (17)
D—H···AD—HH···AD···AD—H···A
N6—H6B···Cl1iii0.88 (2)2.32 (2)3.1731 (13)162.7 (18)
N6—H6A···N4iv0.93 (2)1.91 (2)2.8381 (17)175 (2)
Table 1

Selected bond lengths (Å)

Cu1—N12.0029 (10)
Cu1—Cl12.8719 (5)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N6—H6B⋯Cl1i 0.88 (2)2.32 (2)3.1731 (13)162.7 (18)
N6—H6A⋯N4ii 0.93 (2)1.91 (2)2.8381 (17)175 (2)

Symmetry codes: (i) ; (ii) .

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