Literature DB >> 23109332

Analysis of peptide secondary structures by photoactivatable amino acid analogues.

Knut Kölbel1, Christian H Ihling, Andrea Sinz.   

Abstract

Photochemical cross-linking was applied to trap intramolecular interactions in peptides. The incorporation of diazirine-labeled amino acid analogues in combination with high-resolution mass spectrometry made it possible to catch reverse-turn conformations within peptides, exactly map their self-interacting surfaces, and discriminate between stable and transient interactions.
Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID： 23109332     DOI： 10.1002/anie.201205308

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


  10 in total

1.  Photolytic labeling to probe molecular interactions in lyophilized powders.

Authors:  Lavanya K Iyer; Balakrishnan S Moorthy; Elizabeth M Topp
Journal:  Mol Pharm       Date:  2013-10-29       Impact factor: 4.939

2.  Photoleucine Survives Backbone Cleavage by Electron Transfer Dissociation. A Near-UV Photodissociation and Infrared Multiphoton Dissociation Action Spectroscopy Study.

Authors:  Christopher J Shaffer; Jonathan Martens; Aleš Marek; Jos Oomens; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2016-04-08       Impact factor: 3.109

3.  Imidate-based cross-linkers for structural proteomics: increased charge of protein and peptide ions and CID and ECD fragmentation studies.

Authors:  Hector H F Koolen; Alexandre F Gomes; Nicolas V Schwab; Marcos N Eberlin; Fabio C Gozzo
Journal:  J Am Soc Mass Spectrom       Date:  2014-04-30       Impact factor: 3.109

4.  Conformational Shift of a β-Hairpin Peptide upon Complex Formation with an Oligo-proline Peptide Studied by Mass Spectrometry.

Authors:  Knut Kölbel; Stephan Warnke; Jongcheol Seo; Gert von Helden; Rocco Moretti; Jens Meiler; Kevin Pagel; Andrea Sinz
Journal:  ChemistrySelect       Date:  2016-08-19       Impact factor: 2.109

5.  Collision-induced dissociation of diazirine-labeled peptide ions. Evidence for Brønsted-acid assisted elimination of nitrogen.

Authors:  Aleš Marek; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2014-02-19       Impact factor: 3.109

6.  Analysis of Protein-protein Interaction Interface between Yeast Mitochondrial Proteins Rim1 and Pif1 Using Chemical Cross-linking Mass Spectrometry.

Authors:  Boris Zybailov; Kuppan Gokulan; Jadon Wiese; Ramanagouda Ramanagoudr-Bhojappa; Alicia K Byrd; Galina Glazko; Mihir Jaiswal; Samuel Mackintosh; Kottayil I Varughese; Kevin D Raney
Journal:  J Proteomics Bioinform       Date:  2015-11-19

7.  Efficient Covalent Bond Formation in Gas-Phase Peptide-Peptide Ion Complexes with the Photoleucine Stapler.

Authors:  Christopher J Shaffer; Prokopis C Andrikopoulos; Jan Řezáč; Lubomír Rulíšek; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2016-01-27       Impact factor: 3.109

8.  Analysis of nidogen-1/laminin γ1 interaction by cross-linking, mass spectrometry, and computational modeling reveals multiple binding modes.

Authors:  Philip Lössl; Knut Kölbel; Dirk Tänzler; David Nannemann; Christian H Ihling; Manuel V Keller; Marian Schneider; Frank Zaucke; Jens Meiler; Andrea Sinz
Journal:  PLoS One       Date:  2014-11-11       Impact factor: 3.240

Review 9.  Mitoproteomics: Tackling Mitochondrial Dysfunction in Human Disease.

Authors:  María Gómez-Serrano; Emilio Camafeita; Marta Loureiro; Belén Peral
Journal:  Oxid Med Cell Longev       Date:  2018-11-08       Impact factor: 6.543

10.  Analysis of amyloid nanostructures using photo-cross-linking: in situ comparison of three widely used photo-cross-linkers.

Authors:  George W Preston; Sheena E Radford; Alison E Ashcroft; Andrew J Wilson
Journal:  ACS Chem Biol       Date:  2014-01-13       Impact factor: 5.100
  10 in total

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