Literature DB >> 23108567

The usability of allele-specific PCR and reverse-hybridization assays for KRAS genotyping in Serbian colorectal cancer patients.

Ksenija Brotto1, Emina Malisic, Milena Cavic, Ana Krivokuca, Radmila Jankovic.   

Abstract

BACKGROUND: Colorectal cancers (CRCs) with wild-type KRAS respond to EGFR-targeted antibody treatment. Analysis of the hotspot clustered mutations in codons 12 and 13 is compulsory before therapy and no standardized methodology for that purpose has been established so far. Since these mutations may have different biological effects and clinical outcome, reliable frequency and types of KRAS mutations need to be determined for individual therapy. AIMS: The purpose of this study was to describe the KRAS mutation spectrum in a group of 481 Serbian mCRC patients and to compare the general performances of allele-specific PCR and reverse-hybridization assays.
METHODS: KRAS testing was performed with two diagnostic analyses, DxS TheraScreen K-RAS PCR Kit and KRAS StripAssay™.
RESULTS: KRAS mutations in codons 12 and 13 were present in 37.6 % of analyzed formalin-fixed paraffin-embedded (FFPE) DNA samples. The seven most frequent mutation types were observed with both assays: p.G12D 34.6 %, p.G12V 24.9 %, p.G12A 10.3 %, p.G12C 8.1 %, p.G12S 5.4 %, p.G12R 1.6 %, and p.G13D 15.1 %. Regarding double mutants, 0.8 % of them were present among all tested samples and 2.2 % among KRAS mutated ones.
CONCLUSIONS: Two screening approaches that were used in this study have been shown as suitable tests for detecting KRAS mutations in diagnostic settings. In addition, they appear to be good alternatives to methods presently in use. In our experience, both methods showed capacity to detect and identify double mutations which may be important for potential further subgrouping of CRC patients.

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Year:  2012        PMID: 23108567     DOI: 10.1007/s10620-012-2469-9

Source DB:  PubMed          Journal:  Dig Dis Sci        ISSN: 0163-2116            Impact factor:   3.199


  4 in total

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Authors:  H J Andreyev; A R Norman; D Cunningham; J R Oates; P A Clarke
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Authors:  Niels Smakman; Inne H M Borel Rinkes; Emile E Voest; Onno Kranenburg
Journal:  Biochim Biophys Acta       Date:  2005-08-10

Review 3.  Hyperactive Ras in developmental disorders and cancer.

Authors:  Suzanne Schubbert; Kevin Shannon; Gideon Bollag
Journal:  Nat Rev Cancer       Date:  2007-04       Impact factor: 60.716

Review 4.  Assessment of K-ras mutation: a step toward personalized medicine for patients with colorectal cancer.

Authors:  Yixing Jiang; Eric T Kimchi; Kevin F Staveley-O'Carroll; Hua Cheng; Jaffer A Ajani
Journal:  Cancer       Date:  2009-08-15       Impact factor: 6.860

  4 in total
  2 in total

1.  Comprehensive Validation of Snapback Primer-Based Melting Curve Analysis to Detect Nucleotide Variation in the Codon 12 and 13 of KRAS Gene.

Authors:  Qunfeng Zhang; Yiqiao Du; Xinju Zhang; Zhihua Kang; Ming Guan; Zhiyuan Wu
Journal:  Biomed Res Int       Date:  2018-10-10       Impact factor: 3.411

2.  The role of haematological parameters in predicting the response to radical chemoradiotherapy in patients with anal squamous cell cancer.

Authors:  Suzana Stojanovic-Rundic; Mladen Marinkovic; Milena Cavic; Vesna Plesinac Karapandzic; Dusica Gavrilovic; Radmila Jankovic; Richarda M de Voer; Sergi Castellvi-Bel; Zoran Krivokapic
Journal:  Radiol Oncol       Date:  2021-10-08       Impact factor: 2.991

  2 in total

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