Literature DB >> 23108468

Isolation and characterization of microsatellite markers for an important tropical tree, Aquilaria malaccensis (Thymelaeaceae).

Lee Hong Tnah1, Chai Ting Lee, Soon Leong Lee, Kevin Kit Siong Ng, Chin Hong Ng, Zakaria Nurul-Farhanah, Kah Hoo Lau, Lillian Swee Lian Chua.   

Abstract

PREMISE OF THE STUDY: Aggressive collections and trade activities in recent decades have resulted in heavy pressure on the natural stands of Aquilaria malaccensis and concerns over its long-term survival potential. To aid DNA profiling and assessment of its genetic diversity, microsatellite markers were developed for the species. METHODS AND
RESULTS: Seventeen polymorphic microsatellite markers were developed for A. malaccensis using an enrichment protocol. The markers were screened on 24 samples from a natural population. The number of alleles ranged from two to 11, and the observed heterozygosity ranged from 0.042 to 0.957. No significant deviation from Hardy-Weinberg equilibrium was detected after conservative Bonferroni correction.
CONCLUSIONS: This is the first report on the development of microsatellite markers in A. malaccensis. The markers will be used to establish a DNA profiling database and to estimate the genetic diversity and population genetic structure of the species.

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Year:  2012        PMID: 23108468     DOI: 10.3732/ajb.1200165

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  1 in total

1.  Cross-amplification of microsatellite markers across agarwood-producing species of the Aquilarieae tribe (Thymelaeaceae).

Authors:  Yu Cong Pern; Shiou Yih Lee; Wei Lun Ng; Rozi Mohamed
Journal:  3 Biotech       Date:  2020-02-07       Impact factor: 2.406

  1 in total

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