Literature DB >> 23108467

Microsatellite primers for the endangered beech tree, Fagus hayatae (Fagaceae).

Li-Ping Ju1, Huei-Chuan Shih, Yu-Chung Chiang.   

Abstract

PREMISE OF THE STUDY: Microsatellite primers were developed for the endangered species Fagus hayatae (Fagaceae) to investigate the genetic diversity of the population and to investigate species delimitation within Fagus. METHODS AND
RESULTS: Ten polymorphic simple sequence repeat markers were developed for F. hayatae using a magnetic bead enrichment method. The primers amplified trinucleotides, hexanucleotides, and complex repeats with six to 16 alleles per locus. The observed and expected heterozygosities across loci varied, with a range of 0.05-0.71 and 0.63-0.91, respectively. Most of the primers also amplified DNA from F. crenata, F. grandifolia, F. japonica, F. longipetiolata, F. lucida, F. orientalis, and F. sylvatica.
CONCLUSIONS: These results indicate that these polymorphic loci of F. hayatae will be potentially useful for future studies of the population genetic diversity within the species. In addition, the interspecific amplification indicates that these transferable microsatellite markers will also be useful for future phylogeographic and speciation studies among close Fagus species.

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Year:  2012        PMID: 23108467     DOI: 10.3732/ajb.1200118

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  2 in total

1.  Development and characterization of 16 polymorphic microsatellite markers from Taiwan cow-tail fir, Keteleeria davidiana var. formosana (Pinaceae) and cross-species amplification in other Keteleeria taxa.

Authors:  Chin-Shang Ho; Huei-Chuan Shih; Ho-Yih Liu; Shau-Ting Chiu; Mei-Hui Chen; Li-Ping Ju; Ya-Zhu Ko; Yu-Shen Shih; Chaur-Tzuhn Chen; Tsai-Wen Hsu; Yu-Chung Chiang
Journal:  BMC Res Notes       Date:  2014-04-23

2.  The phylogeography of Fagus hayatae (Fagaceae): genetic isolation among populations.

Authors:  Ling-Xiao Ying; Ting-Ting Zhang; Ching-An Chiu; Tze-Ying Chen; Shu-Jin Luo; Xiao-Yong Chen; Ze-Hao Shen
Journal:  Ecol Evol       Date:  2016-03-21       Impact factor: 2.912

  2 in total

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