Literature DB >> 23105086

Whole-genome sequence of Nocardiopsis alba strain ATCC BAA-2165, associated with honeybees.

Jianjun Qiao1, Lei Chen, Yongli Li, Jiangxin Wang, Weiwen Zhang, Shawn Chen.   

Abstract

The actinomycete Nocardiopsis alba was reportedly associated with honeybees in separate occurrences. We report the complete genome of Nocardiopsis alba ATCC BAA-2165 isolated from honeybee guts. It will provide insights into the metabolism and genetic regulatory networks of this genus of bacteria that enable them to live in a range of environments.

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Year:  2012        PMID： 23105086      PMCID： PMC3486387          DOI： 10.1128/JB.01522-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX.

Authors:  Athanasios Lykidis; Konstantinos Mavromatis; Natalia Ivanova; Iain Anderson; Miriam Land; Genevieve DiBartolo; Michele Martinez; Alla Lapidus; Susan Lucas; Alex Copeland; Paul Richardson; David B Wilson; Nikos Kyrpides
Journal:  J Bacteriol       Date:  2007-01-05       Impact factor: 3.490

2.  Rare actinomycete bacteria from the shallow water sediments of the Trondheim fjord, Norway: isolation, diversity and biological activity.

Authors:  Harald Bredholdt; Olga A Galatenko; Kerstin Engelhardt; Espen Fjaervik; Larissa P Terekhova; Sergey B Zotchev
Journal:  Environ Microbiol       Date:  2007-11       Impact factor: 5.491

3.  Isolation of toxigenic Nocardiopsis strains from indoor environments and description of two new Nocardiopsis Species, N. exhalans sp. nov. and N. umidischolae sp. nov.

Authors:  J S Peltola; M A Andersson; P Kämpfer; G Auling; R M Kroppenstedt; H J Busse; M S Salkinoja-Salonen; F A Rainey
Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

4.  The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov.

Authors:  F A Rainey; N Ward-Rainey; R M Kroppenstedt; E Stackebrandt
Journal:  Int J Syst Bacteriol       Date:  1996-10

5.  Isolation and characterization of a Nocardiopsis sp. from honeybee guts.

Authors:  Preeti B Patil; Yu Zeng; Tami Coursey; Preston Houston; Iain Miller; Shawn Chen
Journal:  FEMS Microbiol Lett       Date:  2010-09-16       Impact factor: 2.742

6.  Molecular identification of a Nocardiopsis dassonvillei blood isolate.

Authors:  F Beau; C Bollet; T Coton; E Garnotel; M Drancourt
Journal:  J Clin Microbiol       Date:  1999-10       Impact factor: 5.948

7.  Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509).

Authors:  Hui Sun; Alla Lapidus; Matt Nolan; Susan Lucas; Tijana Glavina Del Rio; Hope Tice; Jan-Fang Cheng; Roxane Tapia; Cliff Han; Lynne Goodwin; Sam Pitluck; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Olivier Duplex Ngatchou Djao; Manfred Rohde; Johannes Sikorski; Markus Göker; Tanja Woyke; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2010-11-30

8.  antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.

Authors:  Marnix H Medema; Kai Blin; Peter Cimermancic; Victor de Jager; Piotr Zakrzewski; Michael A Fischbach; Tilmann Weber; Eriko Takano; Rainer Breitling
Journal:  Nucleic Acids Res       Date:  2011-06-14       Impact factor: 16.971

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  9 in total
  4 in total

1.  Comparative genomic analysis of the genus Nocardiopsis provides new insights into its genetic mechanisms of environmental adaptability.

Authors:  Hong-Wei Li; Xiao-Yang Zhi; Ji-Cheng Yao; Yu Zhou; Shu-Kun Tang; Hans-Peter Klenk; Jiao Zhao; Wen-Jun Li
Journal:  PLoS One       Date:  2013-04-23       Impact factor: 3.240

Review 2.  Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity.

Authors:  Adzzie-Shazleen Azman; Iekhsan Othman; Saraswati S Velu; Kok-Gan Chan; Learn-Han Lee
Journal:  Front Microbiol       Date:  2015-08-20       Impact factor: 5.640

3.  Draft Genome Sequence of Marine-Derived Actinomycete Nocardiopsis sp. Strain TP-A0876, a Producer of Polyketide Pyrones.

Authors:  Hisayuki Komaki; Natsuko Ichikawa; Akira Hosoyama; Nobuyuki Fujita; Yasuhiro Igarashi
Journal:  Genome Announc       Date:  2014-07-10

Review 4.  Natural Product Potential of the Genus Nocardiopsis.

Authors:  Alyaa Hatem Ibrahim; Samar Yehia Desoukey; Mostafa A Fouad; Mohamed Salah Kamel; Tobias A M Gulder; Usama Ramadan Abdelmohsen
Journal:  Mar Drugs       Date:  2018-04-29       Impact factor: 5.118
  4 in total

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