Literature DB >> 23105081

Draft genome sequence of an Aeromonas sp. strain 159 clinical isolate that shows quorum-sensing activity.

Xin Yue Chan1, Kek Heng Chua, Savithri D Puthucheary, Wai-Fong Yin, Kok-Gan Chan.   

Abstract

Aeromonas is a pathogenic organism that is often found to infect humans. Here we report the draft genome of a clinical isolate in Malaysia, Aeromonas sp. strain 159, which shows N-acylhomoserine lactone production. In the draft genome of strain 159, luxI and luxR homologue genes were found to be located at contig 47, and these genes are believed to be important for the quorum-sensing system present in this pathogen.

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Year:  2012        PMID： 23105081      PMCID： PMC3486352          DOI： 10.1128/JB.01642-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

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Authors:  T M Lowe; S R Eddy
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2.  Quorum sensing in Aeromonas species isolated from patients in Malaysia.

Authors:  Kok-Gan Chan; Savithri D Puthucheary; Xin-Yue Chan; Wai-Fong Yin; Cheng-Siang Wong; Wah-Seng See Too; Kek-Heng Chua
Journal:  Curr Microbiol       Date:  2010-06-11       Impact factor: 2.188

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4.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

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5.  Virulence potential and genetic diversity of Aeromonas caviae, Aeromonas veronii, and Aeromonas hydrophila clinical isolates from Mexico and Spain: a comparative study.

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Review 6.  The genus Aeromonas: taxonomy, pathogenicity, and infection.

Authors:  J Michael Janda; Sharon L Abbott
Journal:  Clin Microbiol Rev       Date:  2010-01       Impact factor: 26.132

7.  Quorum sensing-dependent regulation and blockade of exoprotease production in Aeromonas hydrophila.

Authors:  S Swift; M J Lynch; L Fish; D F Kirke; J M Tomás; G S Stewart; P Williams
Journal:  Infect Immun       Date:  1999-10       Impact factor: 3.441

8.  Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.

Authors:  Ana Conesa; Stefan Götz; Juan Miguel García-Gómez; Javier Terol; Manuel Talón; Montserrat Robles
Journal:  Bioinformatics       Date:  2005-08-04       Impact factor: 6.937

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  9 in total
  19 in total

1.  Assessment of microbial quality and health risks associated with traditional rice wine starter Xaj-pitha of Assam, India: a step towards defined and controlled fermentation.

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3.  Metagenomic sequencing of prokaryotic microbiota from tropical surface seawater.

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4.  Global genome comparative analysis reveals insights of resistome and life-style adaptation of Pseudomonas putida strain T2-2 in oral cavity.

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5.  Insights into the Quorum-Sensing Activity in Aeromonas hydrophila Strain M013 as Revealed by Whole-Genome Sequencing.

Authors:  Wen-Si Tan; Wai-Fong Yin; Kok-Gan Chan
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6.  Draft Genome Sequence of Aeromonas molluscorum Strain 848TT, Isolated from Bivalve Molluscs.

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Journal:  Genome Announc       Date:  2013-06-20

7.  N-acyl homoserine lactone-producing Pseudomonas putida strain T2-2 from human tongue surface.

Authors:  Jian-Woon Chen; Shenyang Chin; Kok Keng Tee; Wai-Fong Yin; Yeun Mun Choo; Kok-Gan Chan
Journal:  Sensors (Basel)       Date:  2013-09-30       Impact factor: 3.576

8.  Draft Genome Sequence of Quorum-Sensing and Quorum-Quenching Pseudomonas aeruginosa Strain MW3a.

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9.  Insights of biosurfactant producing Serratia marcescens strain W2.3 isolated from diseased tilapia fish: a draft genome analysis.

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10.  Complete Genome Sequence of Pandoraea pnomenusa 3kgm, a Quorum-Sensing Strain Isolated from a Former Landfill Site.

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