Literature DB >> 23104371

Genome sequence of Aureobasidium pullulans AY4, an emerging opportunistic fungal pathogen with diverse biotechnological potential.

Giek Far Chan1, Hasima Mustafa Bamadhaj, Han Ming Gan, Noor Aini Abdul Rashid.   

Abstract

Aureobasidium pullulans AY4 is an opportunistic pathogen that was isolated from the skin of an immunocompromised patient. We present here the draft genome of strain AY4, which reveals an abundance of genes relevant to bioindustrial applications, including biocontrol and biodegradation. Putative genes responsible for the pathogenicity of strain AY4 were also identified.

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Year:  2012        PMID： 23104371      PMCID： PMC3486017          DOI： 10.1128/EC.00245-12

Source DB:  PubMed          Journal:  Eukaryot Cell        ISSN： 1535-9786


  9 in total

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2.  Functional and structural microbial diversity in organic and conventional viticulture: organic farming benefits natural biocontrol agents.

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3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

Review 4.  Medical significance of the so-called black yeasts.

Authors:  T Matsumoto; A A Padhye; L Ajello
Journal:  Eur J Epidemiol       Date:  1987-06       Impact factor: 8.082

5.  Emergence of Aureobasidium pullulans as human fungal pathogen and molecular assay for future medical diagnosis.

Authors:  Giek Far Chan; Mohamad Safwan Ahmad Puad; Chai Fung Chin; Noor Aini Abdul Rashid
Journal:  Folia Microbiol (Praha)       Date:  2011-09-10       Impact factor: 2.099

Review 6.  Bioproducts from Aureobasidium pullulans, a biotechnologically important yeast.

Authors:  Zhenming Chi; Fang Wang; Zhe Chi; Lixi Yue; Guanglei Liu; Tong Zhang
Journal:  Appl Microbiol Biotechnol       Date:  2009-02-07       Impact factor: 4.813

7.  Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.

Authors:  Ana Conesa; Stefan Götz; Juan Miguel García-Gómez; Javier Terol; Manuel Talón; Montserrat Robles
Journal:  Bioinformatics       Date:  2005-08-04       Impact factor: 6.937

8.  Redefinition of Aureobasidium pullulans and its varieties.

Authors:  P Zalar; C Gostincar; G S de Hoog; V Ursic; M Sudhadham; N Gunde-Cimerman
Journal:  Stud Mycol       Date:  2008       Impact factor: 16.097

9.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors:  Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
  9 in total
  7 in total

1.  Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species.

Authors:  Cene Gostinčar; Robin A Ohm; Tina Kogej; Silva Sonjak; Martina Turk; Janja Zajc; Polona Zalar; Martin Grube; Hui Sun; James Han; Aditi Sharma; Jennifer Chiniquy; Chew Yee Ngan; Anna Lipzen; Kerrie Barry; Igor V Grigoriev; Nina Gunde-Cimerman
Journal:  BMC Genomics       Date:  2014-07-01       Impact factor: 3.969

2.  Genome-Wide Analysis of Secondary Metabolite Gene Clusters in Ophiostoma ulmi and Ophiostoma novo-ulmi Reveals a Fujikurin-Like Gene Cluster with a Putative Role in Infection.

Authors:  Nicolau Sbaraini; Fábio C Andreis; Claudia E Thompson; Rafael L M Guedes; Ângela Junges; Thais Campos; Charley C Staats; Marilene H Vainstein; Ana T Ribeiro de Vasconcelos; Augusto Schrank
Journal:  Front Microbiol       Date:  2017-06-13       Impact factor: 5.640

3.  Draft Genome Sequences of Several Fungal Strains Selected for Exposure to Microgravity at the International Space Station.

Authors:  Nitin K Singh; Adriana Blachowicz; Jillian Romsdahl; Clay Wang; Tamas Torok; Kasthuri Venkateswaran
Journal:  Genome Announc       Date:  2017-04-13

4.  Genome-scale data resolve ancestral rock-inhabiting lifestyle in Dothideomycetes (Ascomycota).

Authors:  Claudio G Ametrano; Felix Grewe; Pedro W Crous; Stephen B Goodwin; Chen Liang; Laura Selbmann; H Thorsten Lumbsch; Steven D Leavitt; Lucia Muggia
Journal:  IMA Fungus       Date:  2019-10-30       Impact factor: 3.515

5.  New insights on unspecific peroxygenases: superfamily reclassification and evolution.

Authors:  Muniba Faiza; Shengfeng Huang; Dongming Lan; Yonghua Wang
Journal:  BMC Evol Biol       Date:  2019-03-13       Impact factor: 3.260

Review 6.  Systems Biology of Microbial Exopolysaccharides Production.

Authors:  Ozlem Ates
Journal:  Front Bioeng Biotechnol       Date:  2015-12-18

7.  Protective role of trehalose during radiation and heavy metal stress in Aureobasidium subglaciale F134.

Authors:  Tingting Liu; Liying Zhu; Zhiping Zhang; He Huang; Zhidong Zhang; Ling Jiang
Journal:  Sci Rep       Date:  2017-12-14       Impact factor: 4.379
  7 in total

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