Literature DB >> 23102370

Twisting transition between crystalline and fibrillar phases of aggregated peptides.

Tuomas P J Knowles1, Alfonso De Simone, Anthony W Fitzpatrick, Andrew Baldwin, Sarah Meehan, Luke Rajah, Michele Vendruscolo, Mark E Welland, Christopher M Dobson, Eugene M Terentjev.   

Abstract

We study two distinctly ordered condensed phases of polypeptide molecules, amyloid fibrils and amyloidlike microcrystals, and the first-order twisting phase transition between these two states. We derive a single free-energy form which connects both phases. Our model identifies relevant degrees of freedom for describing the collective behavior of supramolecular polypeptide structures, reproduces accurately the results from molecular dynamics simulations as well as from experiments, and sheds light on the uniform nature of the dimensions of different peptide fibrils.

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Year:  2012        PMID: 23102370     DOI: 10.1103/PhysRevLett.109.158101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  12 in total

1.  Energetics Underlying Twist Polymorphisms in Amyloid Fibrils.

Authors:  Xavier Periole; Thomas Huber; Alessandra Bonito-Oliva; Karina C Aberg; Patrick C A van der Wel; Thomas P Sakmar; Siewert J Marrink
Journal:  J Phys Chem B       Date:  2018-01-05       Impact factor: 2.991

2.  Polymer-Peptide Conjugates Convert Amyloid into Protein Nanobundles through Fragmentation and Lateral Association.

Authors:  John W Smith; Xing Jiang; Hyosung An; Alexander M Barclay; Giuseppe Licari; Emad Tajkhorshid; Edwin G Moore; Chad M Rienstra; Jeffrey S Moore; Qian Chen
Journal:  ACS Appl Nano Mater       Date:  2019-09-10

Review 3.  The amyloid state and its association with protein misfolding diseases.

Authors:  Tuomas P J Knowles; Michele Vendruscolo; Christopher M Dobson
Journal:  Nat Rev Mol Cell Biol       Date:  2014-06       Impact factor: 94.444

4.  A theoretical study of polymorphism in VQIVYK fibrils.

Authors:  Jaehoon Yang; Mithila V Agnihotri; Carol J Huseby; Jeff Kuret; Sherwin J Singer
Journal:  Biophys J       Date:  2021-02-09       Impact factor: 4.033

Review 5.  Atomic force microscopy for single molecule characterisation of protein aggregation.

Authors:  Francesco Simone Ruggeri; Tomas Šneideris; Michele Vendruscolo; Tuomas P J Knowles
Journal:  Arch Biochem Biophys       Date:  2019-02-08       Impact factor: 4.013

6.  Factors that drive peptide assembly from native to amyloid structures: experimental and theoretical analysis of [leu-5]-enkephalin mutants.

Authors:  Thanh D Do; Nichole E LaPointe; Smriti Sangwan; David B Teplow; Stuart C Feinstein; Michael R Sawaya; David S Eisenberg; Michael T Bowers
Journal:  J Phys Chem B       Date:  2014-06-18       Impact factor: 2.991

7.  Systematic Moiety Variations of Ultrashort Peptides Produce Profound Effects on Self-Assembly, Nanostructure Formation, Hydrogelation, and Phase Transition.

Authors:  Kiat Hwa Chan; Bo Xue; Robert C Robinson; Charlotte A E Hauser
Journal:  Sci Rep       Date:  2017-10-10       Impact factor: 4.379

8.  Assembly Mechanism for Aggregation of Amyloid Fibrils.

Authors:  Lingyun Zhang
Journal:  Int J Mol Sci       Date:  2018-07-23       Impact factor: 5.923

9.  Competition between crystal and fibril formation in molecular mutations of amyloidogenic peptides.

Authors:  Nicholas P Reynolds; Jozef Adamcik; Joshua T Berryman; Stephan Handschin; Ali Asghar Hakami Zanjani; Wen Li; Kun Liu; Afang Zhang; Raffaele Mezzenga
Journal:  Nat Commun       Date:  2017-11-07       Impact factor: 14.919

10.  Geometrical frustration yields fiber formation in self-assembly.

Authors:  Martin Lenz; Thomas A Witten
Journal:  Nat Phys       Date:  2017-07-03       Impact factor: 20.034

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