Literature DB >> 23100803

Evaluation of in situ functional activity of casing soils during growth cycle of mushroom (Agaricus bisporus (Lange) Imbach) employing community level physiological profiles (CLPPs).

Devendra Kumar Choudhary1, Pavan K Agarwal, Bhavdish N Johri.   

Abstract

Community level physiological profiles (CLPPs) have been rarely applied to mushroom compost ecosystem, probably for the lack of standardized methodology. Recently, however CLPPs have been employed as a tool to investigate the degree of maturity of compost (Mondini and Insam, 2005, Compost Science and Utilization, 13(1): 27-33). The potential of CLPPs to detect compost maturity test is considerably significant in that it provides sensitivity and the simplicity of the assay. The aim of this work was to investigate the maturity of casing that comprised of farm yard manure and spent compost and influence of casing type on the behaviour of bacterial community during the growth cycle of mushroom Agaricus bisporus (Lange) Imbach employing standardized inoculum density and effects of different data interpretation based on the kinetics of colour formation. Casing samples of different age were extracted at a particular dilution and then inoculated in 96 well microtitre plates. Optical density (OD) in well was measured at 590 nm every 24 hours for 5 days. Principal component analysis (PCA) was performed by employing OD values at fixed average well colour development (AWCD). PCA of fresh samples showed that classification and ordination of samples according to their age were significant with fixed AWCD.

Entities:  

Keywords:  AWCD; Community succession; Community-level physiological profile; Diversity indices; Mushroom cropping; PCA

Year:  2009        PMID: 23100803      PMCID: PMC3450282          DOI: 10.1007/s12088-009-0021-1

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  11 in total

1.  Comparison of methods to investigate microbial populations in soils under different agricultural management.

Authors: 
Journal:  FEMS Microbiol Ecol       Date:  2000-08-01       Impact factor: 4.194

Review 2.  Prokaryotic diversity and its limits: microbial community structure in nature and implications for microbial ecology.

Authors:  Thomas P Curtis; William T Sloan
Journal:  Curr Opin Microbiol       Date:  2004-06       Impact factor: 7.934

3.  Analysis of factors affecting the accuracy, reproducibility, and interpretation of microbial community carbon source utilization patterns.

Authors:  S K Haack; H Garchow; M J Klug; L J Forney
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

4.  Impact of carbon and flooding on the metabolic diversity of microbial communities in soils.

Authors:  D A Bossio; K M Scow
Journal:  Appl Environ Microbiol       Date:  1995-11       Impact factor: 4.792

5.  Changes in functional abilities of the microbial community during composting of manure.

Authors:  H Insam; K Amor; M Renner; C Crepaz
Journal:  Microb Ecol       Date:  1996-01       Impact factor: 4.552

6.  The phylogeny of unicellular, extremely halotolerant cyanobacteria.

Authors:  F Garcia-Pichel; U Nübel; G Muyzer
Journal:  Arch Microbiol       Date:  1998-06       Impact factor: 2.552

7.  Theoretical and practical aspects of the quantification of biodiversity among microorganisms.

Authors:  A G O'Donnell; M Goodfellow; D L Hawksworth
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1994-07-29       Impact factor: 6.237

8.  Primordia initiation of mushroom (Agaricus bisporus) strains on axenic casing materials.

Authors:  R Noble; T R Fermor; S Lincoln; A Dobrovin-Pennington; C Evered; A Mead; R Li
Journal:  Mycologia       Date:  2003 Jul-Aug       Impact factor: 2.696

9.  Use of phospholipid fatty acids and carbon source utilization patterns To track microbial community succession in developing compost.

Authors:  L Carpenter-Boggs; A C Kennedy; J P Reganold
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

10.  Relationship between thymidine metabolism, bacterioplankton community metabolic capabilities, and sources of organic matter.

Authors:  J T Hollibaugh
Journal:  Microb Ecol       Date:  1994-09       Impact factor: 4.552

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  2 in total

1.  Pseudomonas sp. UW4 acdS gene promotes primordium initiation and fruiting body development of Agaricus bisporus.

Authors:  Chaohui Zhang; Guang Zhang; Yamei Wen; Tao Li; Yuqian Gao; Fanmei Meng; Liyou Qiu; Yuncan Ai
Journal:  World J Microbiol Biotechnol       Date:  2019-10-21       Impact factor: 3.312

Review 2.  Impact of Cultivation Substrate and Microbial Community on Improving Mushroom Productivity: A Review.

Authors:  Nakarin Suwannarach; Jaturong Kumla; Yan Zhao; Pattana Kakumyan
Journal:  Biology (Basel)       Date:  2022-04-08
  2 in total

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