Literature DB >> 23100768

Molecular diversity of Frankia from root nodules of Hippophae salicifolia D.Don found in Sikkim.

Anindita Khan1, David D Myrold, Arvind Kumar Misra.   

Abstract

Molecular diversity of Frankia was assessed directly from the root nodules of Hippophae salicifolia naturally occurring in North Sikkim. Amplicon restriction patterns (ARPs) were developed by digesting 16S-ITS-23S amplicons with RsaI. Three ARPs were detected, showing diversity among strains of Frankia that nodulate Hippophae. This was confirmed by sequencing one amplicon each for the three ARPs. Therefore, ARP can be used as a tool for screening amplicons for nucleotide sequencing.

Entities:  

Keywords:  Amplicon restriction pattern; Frankia; Hippophae; ITS

Year:  2009        PMID： 23100768      PMCID： PMC3450134          DOI： 10.1007/s12088-009-0025-x

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN： 0046-8991            Impact factor:   2.461


  8 in total

1.  Biodiversity hotspots for conservation priorities.

Authors:  N Myers; R A Mittermeier; C G Mittermeier; G A da Fonseca; J Kent
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

2.  The Actinorhizal Symbiosis.

Authors: 
Journal:  J Plant Growth Regul       Date:  2000-06       Impact factor: 4.169

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Authors:  Ia AKULININ
Journal:  Sov Med       Date:  1958-11

4.  Isolation of Elaeagnus-compatible Frankia from soils collected in Tunisia.

Authors:  Maher Gtari; Lorenzo Brusetti; Gharbi Skander; Diego Mora; Abdellatif Boudabous; Daniele Daffonchio
Journal:  FEMS Microbiol Lett       Date:  2004-05-15       Impact factor: 2.742

Review 5.  The genus Frankia: actinomycete symbionts of plants.

Authors:  D R Benson
Journal:  Microbiol Sci       Date:  1988-01

6.  Genetic diversity among Frankia strains nodulating members of the family Casuarinaceae in Australia revealed by PCR and restriction fragment length polymorphism analysis with crushed root nodules.

Authors:  C Rouvier; Y Prin; P Reddell; P Normand; P Simonet
Journal:  Appl Environ Microbiol       Date:  1996-03       Impact factor: 4.792

7.  Diversity of frankia strains in root nodules of plants from the families elaeagnaceae and rhamnaceae

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-09       Impact factor: 4.792

8.  Evidence that some Frankia sp. strains are able to cross boundaries between Alnus and Elaeagnus host specificity groups.

Authors:  M Bosco; M P Fernandez; P Simonet; R Materassi; P Normand
Journal:  Appl Environ Microbiol       Date:  1992-05       Impact factor: 4.792
  8 in total
  1 in total

1.  Deciphering the evolutionary affiliations among bacterial strains (Pseudomonas and Frankia sp.) inhabiting same ecological niche using virtual RFLP and simulation-based approaches.

Authors:  Meenakshi Srivastava; Manish Singh Kaushik; Amrita Srivastava; Anumeha Singh; Ekta Verma; Arun Kumar Mishra
Journal:  3 Biotech       Date:  2016-08-23       Impact factor: 2.406
  1 in total

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