Literature DB >> 23098075

Experimental and theoretical characterization of a lone pair-π complex: water-hexafluorobenzene.

Jay C Amicangelo1, Daniel G Irwin, Cynthia J Lee, Natalie C Romano, Nancy L Saxton.   

Abstract

The lone pair-π interaction between H(2)O and C(6)F(6) was studied using matrix isolation infrared spectroscopy and quantum chemical calculations. Co-deposition of H(2)O with C(6)F(6) in a nitrogen matrix at 17 K followed by annealing to 30 K, results in the appearance of multiple new peaks in the infrared spectrum that are shifted from the H(2)O and C(6)F(6) parent absorptions. These peaks only appear when both the H(2)O and C(6)F(6) are present and have been assigned to distinct structures of a 1:1 H(2)O·C(6)F(6) complex. Similar experiments were performed with D(2)O and HDO and the corresponding infrared peaks for the structures of the D(2)O·C(6)F(6) and HDO·C(6)F(6) complexes have also been observed. Theoretical calculations were performed for the H(2)O·C(6)F(6) complex using the B3LYP, MP2, and CCSD(T) methods. Geometry optimizations at the B3LYP/aug-cc-pVTZ and MP2/aug-cc-pVDZ levels of theory located three structural minima, all of which involve the lone pair-π interaction between the H(2)O and the C(6)F(6) ring, but with different relative orientations of the H(2)O and C(6)F(6) subunits. BSSE corrected interaction energies were estimated at the CCSD(T)/aug-cc-pVTZ level and found to be between -11.2 and -12.3 kJ/mol for the three H(2)O·C(6)F(6) structures. Vibrational frequencies for the each of the structures were calculated at the B3LYP/aug-cc-pVTZ and MP2/aug-cc-pVDZ levels. The frequencies calculated with both methods support the assignments of the observed new peaks in the infrared spectra to the structures of the H(2)O·C(6)F(6) complex; however, the B3LYP calculated frequency shifts were found to be in better quantitative agreement with the experimentally observed frequency shifts.

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Year:  2012        PMID: 23098075     DOI: 10.1021/jp307984x

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  2 in total

1.  Perfluorinated Taddol Phosphoramidite as an L,Z-Ligand on Rh(I) and Co(-I): Evidence for Bidentate Coordination via Metal-C6F5 Interaction.

Authors:  Derek M Dalton; Anthony K Rappé; Tomislav Rovis
Journal:  Chem Sci       Date:  2013-05-01       Impact factor: 9.825

2.  Occurrence and stability of lone pair-π stacking interactions between ribose and nucleobases in functional RNAs.

Authors:  Mohit Chawla; Edrisse Chermak; Qingyun Zhang; Janusz M Bujnicki; Romina Oliva; Luigi Cavallo
Journal:  Nucleic Acids Res       Date:  2017-11-02       Impact factor: 16.971

  2 in total

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