Literature DB >> 23085573

Enhancing the efficiency of polymerase chain reaction using graphene nanoflakes.

R Abdul Khaliq1, Raed Kafafy, Hamzah Mohd Salleh, Waleed Fekry Faris.   

Abstract

The effect of the recently developed graphene nanoflakes (GNFs) on the polymerase chain reaction (PCR) has been investigated in this paper. The rationale behind the use of GNFs is their unique physical and thermal properties. Experiments show that GNFs can enhance the thermal conductivity of base fluids and results also revealed that GNFs are a potential enhancer of PCR efficiency; moreover, the PCR enhancements are strongly dependent on GNF concentration. It was found that GNFs yield DNA product equivalent to positive control with up to 65% reduction in the PCR cycles. It was also observed that the PCR yield is dependent on the GNF size, wherein the surface area increases and augments thermal conductivity. Computational fluid dynamics (CFD) simulations were performed to analyze the heat transfer through the PCR tube model in the presence and absence of GNFs. The results suggest that the superior thermal conductivity effect of GNFs may be the main cause of the PCR enhancement.

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Year:  2012        PMID: 23085573     DOI: 10.1088/0957-4484/23/45/455106

Source DB:  PubMed          Journal:  Nanotechnology        ISSN: 0957-4484            Impact factor:   3.874


  6 in total

1.  Overcoming qRT-PCR interference by select carbon nanotubes in assessments of gene expression.

Authors:  Sara T Humes; Shannon Hentschel; Candice M Lavelle; L Cody Smith; John A Lednicky; Navid B Saleh; Tara Sabo-Attwood
Journal:  Biotechniques       Date:  2017-08-01       Impact factor: 1.993

2.  Development of nanoparticle-assisted PCR assay in the rapid detection of brain-eating amoebae.

Authors:  Shobana Gabriel; Abdul Khaliq Rasheed; Ruqaiyyah Siddiqui; Jimmy Nelson Appaturi; Leo Bey Fen; Naveed Ahmed Khan
Journal:  Parasitol Res       Date:  2018-04-20       Impact factor: 2.289

3.  Scavenging of OH and OOH radicals by polyradicals of small polycyclic aromatic hydrocarbons.

Authors:  Amarjeet Yadav; Manish Kumar Tiwari; Deep Kumar; Devesh Kumar
Journal:  J Mol Model       Date:  2021-03-24       Impact factor: 1.810

4.  Investigation on Rheological Properties of Water-Based Novel Ternary Hybrid Nanofluids Using Experimental and Taguchi Method.

Authors:  Jalal Mohammed Zayan; Abdul Khaliq Rasheed; Akbar John; Mohammad Khalid; Ahmad Faris Ismail; Abdul Aabid; Muneer Baig
Journal:  Materials (Basel)       Date:  2021-12-21       Impact factor: 3.623

5.  Enhancing the specificity of polymerase chain reaction by graphene oxide through surface modification: zwitterionic polymer is superior to other polymers with different charges.

Authors:  Yong Zhong; Lihong Huang; Zhisen Zhang; Yunjing Xiong; Liping Sun; Jian Weng
Journal:  Int J Nanomedicine       Date:  2016-11-11

6.  Effects of graphene oxide on PCR amplification for microbial community survey.

Authors:  Shuzhen Li; Zhujun Wang; Yuanyuan Wang; Maoyong Song; Guangxin Lu; Ning Dang; Huaqun Yin; Yuanyuan Qu; Ye Deng
Journal:  BMC Microbiol       Date:  2020-09-11       Impact factor: 3.605

  6 in total

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