Literature DB >> 23084874

The genetic analysis of functional connectomics in Drosophila.

Ian A Meinertzhagen1, Chi-Hon Lee.   

Abstract

Fly and vertebrate nervous systems share many organizational features, such as layers, columns and glomeruli, and utilize similar synaptic components, such as ion channels and receptors. Both also exhibit similar network features. Recent technological advances, especially in electron microscopy, now allow us to determine synaptic circuits and identify pathways cell-by-cell, as part of the fly's connectome. Genetic tools provide the means to identify synaptic components, as well as to record and manipulate neuronal activity, adding function to the connectome. This review discusses technical advances in these emerging areas of functional connectomics, offering prognoses in each and identifying the challenges in bridging structural connectomics to molecular biology and synaptic physiology, thereby determining fundamental mechanisms of neural computation that underlie behavior.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 23084874      PMCID: PMC4251806          DOI: 10.1016/B978-0-12-404742-6.00003-X

Source DB:  PubMed          Journal:  Adv Genet        ISSN: 0065-2660            Impact factor:   1.944


  274 in total

Review 1.  GAL4 system in Drosophila: a fly geneticist's Swiss army knife.

Authors:  Joseph B Duffy
Journal:  Genesis       Date:  2002 Sep-Oct       Impact factor: 2.487

Review 2.  Biological pattern generation: the cellular and computational logic of networks in motion.

Authors:  Sten Grillner
Journal:  Neuron       Date:  2006-12-07       Impact factor: 17.173

3.  The optic lobe of Drosophila melanogaster. II. Sorting of retinotopic pathways in the medulla.

Authors:  B Bausenwein; A P Dittrich; K F Fischbach
Journal:  Cell Tissue Res       Date:  1992-01       Impact factor: 5.249

Review 4.  Variability, compensation, and modulation in neurons and circuits.

Authors:  Eve Marder
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-07       Impact factor: 11.205

5.  Anatomical plasticity of synapses in the lamina of the optic lobe of the fly.

Authors:  K Kral; I A Meinertzhagen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1989-02-27       Impact factor: 6.237

6.  Cell-type-specific nuclei purification from whole animals for genome-wide expression and chromatin profiling.

Authors:  Florian A Steiner; Paul B Talbert; Sivakanthan Kasinathan; Roger B Deal; Steven Henikoff
Journal:  Genome Res       Date:  2012-01-04       Impact factor: 9.043

7.  Differential ultrastructure of synaptic terminals on ventral longitudinal abdominal muscles in Drosophila larvae.

Authors:  H L Atwood; C K Govind; C F Wu
Journal:  J Neurobiol       Date:  1993-08

8.  Two functional but noncomplementing Drosophila tyrosine decarboxylase genes: distinct roles for neural tyramine and octopamine in female fertility.

Authors:  Shannon H Cole; Ginger E Carney; Colleen A McClung; Stacey S Willard; Barbara J Taylor; Jay Hirsh
Journal:  J Biol Chem       Date:  2005-02-03       Impact factor: 5.157

9.  Multiple spectral inputs improve motion discrimination in the Drosophila visual system.

Authors:  Trevor J Wardill; Olivier List; Xiaofeng Li; Sidhartha Dongre; Marie McCulloch; Chun-Yuan Ting; Cahir J O'Kane; Shiming Tang; Chi-Hon Lee; Roger C Hardie; Mikko Juusola
Journal:  Science       Date:  2012-05-18       Impact factor: 47.728

10.  Versatile P[acman] BAC libraries for transgenesis studies in Drosophila melanogaster.

Authors:  Koen J T Venken; Joseph W Carlson; Karen L Schulze; Hongling Pan; Yuchun He; Rebecca Spokony; Kenneth H Wan; Maxim Koriabine; Pieter J de Jong; Kevin P White; Hugo J Bellen; Roger A Hoskins
Journal:  Nat Methods       Date:  2009-06       Impact factor: 28.547

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  19 in total

Review 1.  From the connectome to brain function.

Authors:  Cornelia I Bargmann; Eve Marder
Journal:  Nat Methods       Date:  2013-06       Impact factor: 28.547

2.  Multiple redundant medulla projection neurons mediate color vision in Drosophila.

Authors:  Krishna V Melnattur; Randall Pursley; Tzu-Yang Lin; Chun-Yuan Ting; Paul D Smith; Thomas Pohida; Chi-Hon Lee
Journal:  J Neurogenet       Date:  2014-04-28       Impact factor: 1.250

Review 3.  Micro-connectomics: probing the organization of neuronal networks at the cellular scale.

Authors:  Manuel Schröter; Ole Paulsen; Edward T Bullmore
Journal:  Nat Rev Neurosci       Date:  2017-02-02       Impact factor: 34.870

4.  Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing.

Authors:  Barbara Treutlein; Ozgun Gokce; Stephen R Quake; Thomas C Südhof
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-17       Impact factor: 11.205

5.  Candidate neural substrates for off-edge motion detection in Drosophila.

Authors:  Kazunori Shinomiya; Thangavel Karuppudurai; Tzu-Yang Lin; Zhiyuan Lu; Chi-Hon Lee; Ian A Meinertzhagen
Journal:  Curr Biol       Date:  2014-04-24       Impact factor: 10.834

6.  Monitoring cell-cell contacts in vivo in transgenic animals.

Authors:  Ting-Hao Huang; Tarciso Velho; Carlos Lois
Journal:  Development       Date:  2016-09-22       Impact factor: 6.868

7.  Cellular and synaptic adaptations of neural circuits processing skylight polarization in the fly.

Authors:  Gizem Sancer; Emil Kind; Juliane Uhlhorn; Julia Volkmann; Johannes Hammacher; Tuyen Pham; Haritz Plazaola-Sasieta; Mathias F Wernet
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2019-12-06       Impact factor: 1.836

8.  Segmentation of the mouse fourth deep lumbrical muscle connectome reveals concentric organisation of motor units.

Authors:  Theodore C Hirst; Richard R Ribchester
Journal:  J Physiol       Date:  2013-08-12       Impact factor: 5.182

9.  A hard-wired glutamatergic circuit pools and relays UV signals to mediate spectral preference in Drosophila.

Authors:  Thangavel Karuppudurai; Tzu-Yang Lin; Chun-Yuan Ting; Randall Pursley; Krishna V Melnattur; Fengqiu Diao; Benjamin H White; Lindsey J Macpherson; Marco Gallio; Thomas Pohida; Chi-Hon Lee
Journal:  Neuron       Date:  2014-02-05       Impact factor: 17.173

10.  A common evolutionary origin for the ON- and OFF-edge motion detection pathways of the Drosophila visual system.

Authors:  Kazunori Shinomiya; Shin-ya Takemura; Patricia K Rivlin; Stephen M Plaza; Louis K Scheffer; Ian A Meinertzhagen
Journal:  Front Neural Circuits       Date:  2015-07-09       Impact factor: 3.492

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