Literature DB >> 23077319

High frequency of herpesvirus-specific clonotypes in the human T cell repertoire can remain stable over decades with minimal turnover.

M A Neller1, J M Burrows, M J Rist, J J Miles, S R Burrows.   

Abstract

High-throughput T cell receptor sequencing on sequentially banked blood samples from healthy individuals has shown that high-frequency clonotypes can remain relatively stable for up to 18 years, with minimal inflation, deflation, or turnover. These populations included T cell expansions specific for Epstein-Barr virus. Thus, in spite of exposure to a barrage of microorganisms over the course of life, the dominant clonotypes in the mature peripheral T cell repertoire can alter surprisingly little.

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Year:  2012        PMID: 23077319      PMCID: PMC3536364          DOI: 10.1128/JVI.02180-12

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  18 in total

1.  Diversity of human alpha beta T cell receptors.

Authors:  T P Arstila; A Casrouge; V Baron; J Even; J Kanellopoulos; P Kourilsky
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

2.  A direct estimate of the human alphabeta T cell receptor diversity.

Authors:  T P Arstila; A Casrouge; V Baron; J Even; J Kanellopoulos; P Kourilsky
Journal:  Science       Date:  1999-10-29       Impact factor: 47.728

3.  Cytomegalovirus seropositivity drives the CD8 T cell repertoire toward greater clonality in healthy elderly individuals.

Authors:  Naeem Khan; Naseer Shariff; Mark Cobbold; Rachel Bruton; Jenni A Ainsworth; Alan J Sinclair; Laxman Nayak; Paul A H Moss
Journal:  J Immunol       Date:  2002-08-15       Impact factor: 5.422

4.  CTL recognition of a bulged viral peptide involves biased TCR selection.

Authors:  John J Miles; Diah Elhassen; Natalie A Borg; Sharon L Silins; Fleur E Tynan; Jacqueline M Burrows; Anthony W Purcell; Lars Kjer-Nielsen; Jamie Rossjohn; Scott R Burrows; James McCluskey
Journal:  J Immunol       Date:  2005-09-15       Impact factor: 5.422

5.  Longitudinal analysis of herpes simplex virus-specific CD4+ cell clonotypes in infected tissues and blood.

Authors:  Serge Barcy; Meei-Li Huang; Lawrence Corey; David M Koelle
Journal:  J Infect Dis       Date:  2005-05-12       Impact factor: 5.226

6.  T-cell grit: large clonal expansions of virus-specific CD8+ T cells can dominate in the peripheral circulation for at least 18 years.

Authors:  John J Miles; Sharon L Silins; Andrew G Brooks; Joanne E Davis; Ihor Misko; Scott R Burrows
Journal:  Blood       Date:  2005-12-15       Impact factor: 22.113

7.  Herpesvirus-specific CD8 T cell immunity in old age: cytomegalovirus impairs the response to a coresident EBV infection.

Authors:  Naeem Khan; Andrew Hislop; Nancy Gudgeon; Mark Cobbold; Rajiv Khanna; Laxman Nayak; Alan B Rickinson; Paul A H Moss
Journal:  J Immunol       Date:  2004-12-15       Impact factor: 5.422

8.  Restoring function in exhausted CD8 T cells during chronic viral infection.

Authors:  Daniel L Barber; E John Wherry; David Masopust; Baogong Zhu; James P Allison; Arlene H Sharpe; Gordon J Freeman; Rafi Ahmed
Journal:  Nature       Date:  2005-12-28       Impact factor: 49.962

9.  IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V-J and V-D-J JUNCTIONs.

Authors:  Mehdi Yousfi Monod; Véronique Giudicelli; Denys Chaume; Marie-Paule Lefranc
Journal:  Bioinformatics       Date:  2004-08-04       Impact factor: 6.937

10.  Continuous recruitment of naive T cells contributes to heterogeneity of antiviral CD8 T cells during persistent infection.

Authors:  Vaiva Vezys; David Masopust; Christopher C Kemball; Daniel L Barber; Leigh A O'Mara; Christian P Larsen; Thomas C Pearson; Rafi Ahmed; Aron E Lukacher
Journal:  J Exp Med       Date:  2006-09-11       Impact factor: 14.307

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  12 in total

1.  Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire.

Authors:  Ryan O Emerson; William S DeWitt; Marissa Vignali; Jenna Gravley; Joyce K Hu; Edward J Osborne; Cindy Desmarais; Mark Klinger; Christopher S Carlson; John A Hansen; Mark Rieder; Harlan S Robins
Journal:  Nat Genet       Date:  2017-04-03       Impact factor: 38.330

2.  Coinfection with Human Cytomegalovirus Genetic Variants in Transplant Recipients and Its Impact on Antiviral T Cell Immune Reconstitution.

Authors:  Corey Smith; Rebekah M Brennan; Siok-Keen Tey; Mark J Smyth; Scott R Burrows; John J Miles; Geoffrey R Hill; Rajiv Khanna
Journal:  J Virol       Date:  2016-07-27       Impact factor: 5.103

3.  CTLA4 blockade broadens the peripheral T-cell receptor repertoire.

Authors:  Lidia Robert; Jennifer Tsoi; Xiaoyan Wang; Ryan Emerson; Blanca Homet; Thinle Chodon; Stephen Mok; Rong Rong Huang; Alistair J Cochran; Begoña Comin-Anduix; Richard C Koya; Thomas G Graeber; Harlan Robins; Antoni Ribas
Journal:  Clin Cancer Res       Date:  2014-02-28       Impact factor: 12.531

4.  Naive CD8⁺ T-cell precursors display structured TCR repertoires and composite antigen-driven selection dynamics.

Authors:  Michelle A Neller; Kristin Ladell; James E McLaren; Katherine K Matthews; Emma Gostick; Johanne M Pentier; Garry Dolton; Andrea J A Schauenburg; Dan Koning; Ana Isabel C A Fontaine Costa; Thomas S Watkins; Vanessa Venturi; Corey Smith; Rajiv Khanna; Kelly Miners; Mathew Clement; Linda Wooldridge; David K Cole; Debbie van Baarle; Andrew K Sewell; Scott R Burrows; David A Price; John J Miles
Journal:  Immunol Cell Biol       Date:  2015-03-24       Impact factor: 5.126

5.  Characterization of human αβTCR repertoire and discovery of D-D fusion in TCRβ chains.

Authors:  Peipei Liu; Di Liu; Xi Yang; Jing Gao; Yan Chen; Xue Xiao; Fei Liu; Jing Zou; Jun Wu; Juncai Ma; Fangqing Zhao; Xuyu Zhou; George F Gao; Baoli Zhu
Journal:  Protein Cell       Date:  2014-05-28       Impact factor: 14.870

6.  Ultra-deep T cell receptor sequencing reveals the complexity and intratumour heterogeneity of T cell clones in renal cell carcinomas.

Authors:  Marco Gerlinger; Sergio A Quezada; Karl S Peggs; Andrew J S Furness; Rosalie Fisher; Teresa Marafioti; Vishvesh H Shende; Nicholas McGranahan; Andrew J Rowan; Steven Hazell; David Hamm; Harlan S Robins; Lisa Pickering; Martin Gore; David L Nicol; James Larkin; Charles Swanton
Journal:  J Pathol       Date:  2013-12       Impact factor: 7.996

7.  Longitudinal immunosequencing in healthy people reveals persistent T cell receptors rich in highly public receptors.

Authors:  Nathaniel D Chu; Haixin Sarah Bi; Ryan O Emerson; Anna M Sherwood; Michael E Birnbaum; Harlan S Robins; Eric J Alm
Journal:  BMC Immunol       Date:  2019-06-21       Impact factor: 3.615

8.  Immune parameters to consider when choosing T-cell receptors for therapy.

Authors:  Scott R Burrows; John J Miles
Journal:  Front Immunol       Date:  2013-08-05       Impact factor: 7.561

9.  Multivariate Analysis Using High Definition Flow Cytometry Reveals Distinct T Cell Repertoires between the Fetal-Maternal Interface and the Peripheral Blood.

Authors:  Michelle A Neller; Brigitte Santner-Nanan; Rebekah M Brennan; Peter Hsu; Steven Joung; Ralph Nanan; Scott R Burrows; John J Miles
Journal:  Front Immunol       Date:  2014-02-05       Impact factor: 7.561

10.  powerTCR: A model-based approach to comparative analysis of the clone size distribution of the T cell receptor repertoire.

Authors:  Hillary Koch; Dmytro Starenki; Sara J Cooper; Richard M Myers; Qunhua Li
Journal:  PLoS Comput Biol       Date:  2018-11-28       Impact factor: 4.475

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