Literature DB >> 23077203

Leaf rolling allows quantification of mRNA abundance in mesophyll cells of sorghum.

Sarah Covshoff1, Robert T Furbank, Richard C Leegood, Julian M Hibberd.   

Abstract

In the leaves of most C(4) plants, mesophyll (M) and bundle sheath (BS) cells develop and maintain highly differentiated biochemical networks. Separation and analysis of M and BS cells has greatly influenced our understanding of the C(4) pathway. A number of approaches including mechanical separation, digestion with cell wall-degrading cocktails, laser-capture microdissection, and leaf rolling have been used to isolate these cell types. Although leaf rolling is conceptually and practically the simplest method, to date it has only been used to assess the metabolite content of M cells from C(4) leaves of maize. This study reports an adapted leaf-rolling method for the isolation of high-quality RNA from M cells of sorghum. Analysis of leaf cell structure, RNA integrity, and transcript abundance of marker genes demonstrated that the sap collected by leaf rolling was from M cells and had no significant contamination. It was concluded that leaf rolling is a fast, cheap, and efficient method of measuring transcript abundance in M cells of sorghum.

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Year:  2012        PMID: 23077203     DOI: 10.1093/jxb/ers286

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  12 in total

1.  Genome-Wide Transcription Factor Binding in Leaves from C3 and C4 Grasses.

Authors:  Steven J Burgess; Ivan Reyna-Llorens; Sean R Stevenson; Pallavi Singh; Katja Jaeger; Julian M Hibberd
Journal:  Plant Cell       Date:  2019-08-19       Impact factor: 11.277

2.  Evolutionary convergence of cell-specific gene expression in independent lineages of C4 grasses.

Authors:  Christopher R John; Richard D Smith-Unna; Helen Woodfield; Sarah Covshoff; Julian M Hibberd
Journal:  Plant Physiol       Date:  2014-03-27       Impact factor: 8.340

Review 3.  Getting the most out of natural variation in C4 photosynthesis.

Authors:  Sarah Covshoff; Steven J Burgess; Jana Kneřová; Britta M C Kümpers
Journal:  Photosynth Res       Date:  2013-06-21       Impact factor: 3.573

4.  An Untranslated cis-Element Regulates the Accumulation of Multiple C4 Enzymes in Gynandropsis gynandra Mesophyll Cells.

Authors:  Ben P Williams; Steven J Burgess; Ivan Reyna-Llorens; Jana Knerova; Sylvain Aubry; Susan Stanley; Julian M Hibberd
Journal:  Plant Cell       Date:  2016-01-15       Impact factor: 11.277

5.  C4 Photosynthesis in the Rice Paddy: Insights from the Noxious Weed Echinochloa glabrescens.

Authors:  Sarah Covshoff; Marek Szecowka; Thomas E Hughes; Richard Smith-Unna; Steven Kelly; Karen J Bailey; Tammy L Sage; Justin A Pachebat; Richard Leegood; Julian M Hibberd
Journal:  Plant Physiol       Date:  2015-11-02       Impact factor: 8.340

6.  A novel RNA binding protein affects rbcL gene expression and is specific to bundle sheath chloroplasts in C4 plants.

Authors:  Shaun M Bowman; Minesh Patel; Pradeep Yerramsetty; Christopher M Mure; Amy M Zielinski; Jeremy A Bruenn; James O Berry
Journal:  BMC Plant Biol       Date:  2013-09-22       Impact factor: 4.215

7.  Independent and Parallel Evolution of New Genes by Gene Duplication in Two Origins of C4 Photosynthesis Provides New Insight into the Mechanism of Phloem Loading in C4 Species.

Authors:  David M Emms; Sarah Covshoff; Julian M Hibberd; Steven Kelly
Journal:  Mol Biol Evol       Date:  2016-03-24       Impact factor: 16.240

8.  Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data.

Authors:  Alisandra K Denton; Janina Maß; Canan Külahoglu; Martin J Lercher; Andrea Bräutigam; Andreas P M Weber
Journal:  J Exp Bot       Date:  2017-01-02       Impact factor: 6.992

9.  Maize leaf PPDK regulatory protein isoform-2 is specific to bundle sheath chloroplasts and paradoxically lacks a Pi-dependent PPDK activation activity.

Authors:  Chris J Chastain; Lisa M Baird; Mitchell T Walker; Charles C Bergman; Gulnara T Novbatova; Candida S Mamani-Quispe; Jim N Burnell
Journal:  J Exp Bot       Date:  2018-02-23       Impact factor: 6.992

10.  Screening of Mutants Related to the C4 Photosynthetic Kranz Structure in Foxtail Millet.

Authors:  Mingzhao Luo; Shuo Zhang; Chanjuan Tang; Guanqing Jia; Sha Tang; Hui Zhi; Xianmin Diao
Journal:  Front Plant Sci       Date:  2018-11-14       Impact factor: 5.753

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