Literature DB >> 23076879

Oligonucleotide-templated chemical reactions: pushing the boundaries of a nature-inspired process.

Claudia Percivalle1, Jean-François Bartolo, Sylvain Ladame.   

Abstract

Widespread in nature, oligonucleotide-templated reactions of phosphodiester bond formation have inspired chemists who are now applying this elegant strategy to the catalysis of a broad range of otherwise inefficient reactions. This review highlights the increasing diversity of chemical reactions that can be efficiently catalysed by an oligonucleotide template, using Watson-Crick base-pairing to bring both reagents in close enough proximity to react, thus increasing significantly their effective molarity. The applications of this elegant concept for nucleic acid sensing and controlled organic synthesis will also be discussed.

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Year:  2013        PMID: 23076879     DOI: 10.1039/c2ob26163d

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  11 in total

1.  Effective molarity redux: Proximity as a guiding force in chemistry and biology.

Authors:  Elissa M Hobert; Amy E Doerner; Allison S Walker; Alanna Schepartz
Journal:  Isr J Chem       Date:  2013-08       Impact factor: 3.333

2.  Effective molarity in a nucleic acid-controlled reaction.

Authors:  Michael J Catalano; Nathan E Price; Kent S Gates
Journal:  Bioorg Med Chem Lett       Date:  2016-04-09       Impact factor: 2.823

3.  Near-infrared silver cluster optically signaling oligonucleotide hybridization and assembling two DNA hosts.

Authors:  Jeffrey T Petty; David A Nicholson; Orlin O Sergev; Stuart K Graham
Journal:  Anal Chem       Date:  2014-09-04       Impact factor: 6.986

4.  A dynamic combinatorial approach for identifying side groups that stabilize DNA-templated supramolecular self-assemblies.

Authors:  Delphine Paolantoni; Sonia Cantel; Pascal Dumy; Sébastien Ulrich
Journal:  Int J Mol Sci       Date:  2015-02-06       Impact factor: 5.923

5.  Subnanomolar Detection of Oligonucleotides through Templated Fluorogenic Reaction in Hydrogels: Controlling Diffusion to Improve Sensitivity.

Authors:  Dana Al Sulaiman; Jason Y H Chang; Sylvain Ladame
Journal:  Angew Chem Int Ed Engl       Date:  2017-04-06       Impact factor: 15.336

6.  Chemical ligation of oligonucleotides using an electrophilic phosphorothioester.

Authors:  Hideto Maruyama; Ryota Oikawa; Mayu Hayakawa; Shono Takamori; Yasuaki Kimura; Naoko Abe; Genichiro Tsuji; Akira Matsuda; Satoshi Shuto; Yoshihiro Ito; Hiroshi Abe
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

7.  Peptide nucleic acid-templated selenocystine-selenoester ligation enables rapid miRNA detection.

Authors:  Jessica Sayers; Richard J Payne; Nicolas Winssinger
Journal:  Chem Sci       Date:  2017-11-22       Impact factor: 9.825

Review 8.  Fluorogenic PNA probes.

Authors:  Tirayut Vilaivan
Journal:  Beilstein J Org Chem       Date:  2018-01-29       Impact factor: 2.883

9.  Using antibodies to control DNA-templated chemical reactions.

Authors:  Lorena Baranda Pellejero; Malihe Mahdifar; Gianfranco Ercolani; Jonathan Watson; Tom Brown; Francesco Ricci
Journal:  Nat Commun       Date:  2020-12-07       Impact factor: 14.919

Review 10.  Modified nucleic acids: replication, evolution, and next-generation therapeutics.

Authors:  Karen Duffy; Sebastian Arangundy-Franklin; Philipp Holliger
Journal:  BMC Biol       Date:  2020-09-02       Impact factor: 7.431

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