Literature DB >> 23076732

Structural characterization of hydroperoxide lyase in dodecyl maltoside by using circular dichroism.

I Panagakou1, E Touloupakis, D F Ghanotakis.   

Abstract

Fatty acid hydroperoxide lyase (HPL) is a membrane protein, member of the lipoxygenase pathway, which holds a central role in plant defense. Green bell pepper fatty acid hydroperoxide lyase, overexpressed in Escherichia coli, was purified and solubilized in two different non ionic detergents, Triton X-100 and dodecyl maltoside (DM). DM is considered to be more useful compared to Triton X-100, as it allows characterization of the protein with spectroscopic techniques, for which Triton X-100 was inapplicable. Circular dichroism demonstrated that HPL's secondary structure in DM consists of 13.53 % α-helix, 32.73 % β-sheet, 21.76 % turn and 31.13 % unordered.

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Year:  2013        PMID: 23076732     DOI: 10.1007/s10930-012-9454-1

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  25 in total

1.  Spectroscopic studies on the active site of hydroperoxide lyase; the influence of detergents on its conformation.

Authors:  M A Noordermeer; G A Veldink; J F Vliegenthart
Journal:  FEBS Lett       Date:  2001-02-02       Impact factor: 4.124

2.  On the analysis of membrane protein circular dichroism spectra.

Authors:  Narasimha Sreerama; Robert W Woody
Journal:  Protein Sci       Date:  2004-01       Impact factor: 6.725

3.  Using circular dichroism spectra to estimate protein secondary structure.

Authors:  Norma J Greenfield
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

4.  Protein structure prediction on the Web: a case study using the Phyre server.

Authors:  Lawrence A Kelley; Michael J E Sternberg
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  The 2.6-A crystal structure of Pseudomonas putida cytochrome P-450.

Authors:  T L Poulos; B C Finzel; I C Gunsalus; G C Wagner; J Kraut
Journal:  J Biol Chem       Date:  1985-12-25       Impact factor: 5.157

7.  Membrane protein expression and production: effects of polyhistidine tag length and position.

Authors:  Arun K Mohanty; Michael C Wiener
Journal:  Protein Expr Purif       Date:  2004-02       Impact factor: 1.650

8.  Optimisation of expression and immobilized metal ion affinity chromatographic purification of recombinant (His)6-tagged cytochrome P450 hydroperoxide lyase in Escherichia coli.

Authors:  Jérôme Delcarte; Marie- Laure Fauconnier; Philippe Jacques; Kenji Matsui; Philippe Thonart; Michel Marlier
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2003-03-25       Impact factor: 3.205

9.  The "heterolytic hydroperoxide lyase" is an isomerase producing a short-lived fatty acid hemiacetal.

Authors:  Alexander N Grechkin; Mats Hamberg
Journal:  Biochim Biophys Acta       Date:  2004-02-27

10.  Mammalian microsomal cytochrome P450 monooxygenase: structural adaptations for membrane binding and functional diversity.

Authors:  P A Williams; J Cosme; V Sridhar; E F Johnson; D E McRee
Journal:  Mol Cell       Date:  2000-01       Impact factor: 17.970

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